RNA–Protein interactions for RNA: ENST00000220888.9

TRPS1-201, Transcript of transcriptional repressor GATA binding 1, humanhuman

TSL 1 (best) BASIC

Gene TRPS1, Length 5,480 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPS1-201ENST00000220888 ESRRGP62508 458 aa11.24□□□□□ -0.61
TRPS1-201ENST00000220888 TKFCQ3LXA3 575 aa11.24□□□□□ -0.61
TRPS1-201ENST00000220888 PATL1Q86TB9 770 aaKnown RBP11.24□□□□□ -0.61
TRPS1-201ENST00000220888 SFR1Q86XK3 245 aa11.24□□□□□ -0.61
TRPS1-201ENST00000220888 RNF149Q8NC42 400 aa11.24□□□□□ -0.61
TRPS1-201ENST00000220888 CELF1Q92879 486 aaKnown RBP11.24□□□□□ -0.61
TRPS1-201ENST00000220888 ABHD8Q96I13 439 aa11.24□□□□□ -0.61
TRPS1-201ENST00000220888 CAPS2Q9BXY5 557 aa11.24□□□□□ -0.61
TRPS1-201ENST00000220888 NDST4Q9H3R1 872 aa11.24□□□□□ -0.61
TRPS1-201ENST00000220888 GTSE1Q9NYZ3 720 aa11.24□□□□□ -0.61
TRPS1-201ENST00000220888 GGA3Q9NZ52 723 aa11.24□□□□□ -0.61
TRPS1-201ENST00000220888 STX18Q9P2W9 335 aaKnown RBP11.24□□□□□ -0.61
TRPS1-201ENST00000220888 PCDHB7Q9Y5E2 793 aa11.24□□□□□ -0.61
TRPS1-201ENST00000220888 PTPN12Q05209 780 aaKnown RBP11.24□□□□□ -0.61
TRPS1-201ENST00000220888 TMEM132BQ14DG7 1078 aa11.24□□□□□ -0.61
TRPS1-201ENST00000220888 SCHIP1Q9P0W5 487 aaPredicted RBP11.24□□□□□ -0.61
TRPS1-201ENST00000220888 DFFAO00273 331 aa11.23□□□□□ -0.61
TRPS1-201ENST00000220888 KDM1AO60341 852 aa11.23□□□□□ -0.61
TRPS1-201ENST00000220888 LRG1P02750 347 aa11.23□□□□□ -0.61
TRPS1-201ENST00000220888 STAG3L1P0CL83 205 aa11.23□□□□□ -0.61
TRPS1-201ENST00000220888 AKT1P31749 480 aa11.23□□□□□ -0.61
TRPS1-201ENST00000220888 EIF4A3P38919 411 aaKnown RBP11.23□□□□□ -0.61
TRPS1-201ENST00000220888 POU5F1BQ06416 359 aa11.23□□□□□ -0.61
TRPS1-201ENST00000220888 AP1B1Q10567 949 aa11.23□□□□□ -0.61
TRPS1-201ENST00000220888 ANGEL2Q5VTE6 544 aaKnown RBP11.23□□□□□ -0.61
TRPS1-201ENST00000220888 ZNF589Q86UQ0 364 aaPredicted RBP11.23□□□□□ -0.61
TRPS1-201ENST00000220888 NSUN7Q8NE18 718 aaKnown RBP11.23□□□□□ -0.61
TRPS1-201ENST00000220888 CEP19Q96LK0 163 aa11.23□□□□□ -0.61
TRPS1-201ENST00000220888 LSG1Q9H089 658 aaKnown RBP11.23□□□□□ -0.61
TRPS1-201ENST00000220888 KDM4CQ9H3R0 1056 aa11.23□□□□□ -0.61
TRPS1-201ENST00000220888 SMARCAD1Q9H4L7 1026 aa11.23□□□□□ -0.61
TRPS1-201ENST00000220888 AIPL1Q9NZN9 384 aa11.23□□□□□ -0.61
TRPS1-201ENST00000220888 THEGQ9P2T0 379 aa11.23□□□□□ -0.61
TRPS1-201ENST00000220888 AATKQ6ZMQ8 1374 aa11.23□□□□□ -0.61
TRPS1-201ENST00000220888 KRT38O76015 456 aa11.23□□□□□ -0.61
TRPS1-201ENST00000220888 ZRANB2O95218 330 aaKnown RBP eCLIP11.23□□□□□ -0.61
TRPS1-201ENST00000220888 ZBED6P86452 979 aa11.23□□□□□ -0.61
TRPS1-201ENST00000220888 HSP90AA5PQ58FG0 334 aa11.23□□□□□ -0.61
TRPS1-201ENST00000220888 GLYCTKQ8IVS8 523 aa11.23□□□□□ -0.61
TRPS1-201ENST00000220888 DCP1BQ8IZD4 617 aaKnown RBP11.23□□□□□ -0.61
TRPS1-201ENST00000220888 ASPSCR1Q9BZE9 553 aa11.23□□□□□ -0.61
TRPS1-201ENST00000220888 EPB41L5Q9HCM4 733 aa11.23□□□□□ -0.61
TRPS1-201ENST00000220888 JPH1Q9HDC5 661 aaPredicted RBP11.23□□□□□ -0.61
TRPS1-201ENST00000220888 RNF14Q9UBS8 474 aa11.23□□□□□ -0.61
TRPS1-201ENST00000220888 PLEKHA8P1O95397 391 aa11.23□□□□□ -0.61
TRPS1-201ENST00000220888 ALDH1A3P47895 512 aa11.23□□□□□ -0.61
TRPS1-201ENST00000220888 NFIXQ14938 502 aa11.23□□□□□ -0.61
TRPS1-201ENST00000220888 DUOXA2Q1HG44 320 aa11.23□□□□□ -0.61
TRPS1-201ENST00000220888 GNASQ5JWF2 1037 aa11.23□□□□□ -0.61
TRPS1-201ENST00000220888 SPATS2Q86XZ4 545 aaKnown RBP11.23□□□□□ -0.61
TRPS1-201ENST00000220888 GPRC5AQ8NFJ5 357 aa11.23□□□□□ -0.61
TRPS1-201ENST00000220888 ASAP3Q8TDY4 903 aa11.23□□□□□ -0.61
TRPS1-201ENST00000220888 CEP95Q96GE4 821 aa11.23□□□□□ -0.61
TRPS1-201ENST00000220888 DNAJC7Q99615 494 aa11.23□□□□□ -0.61
TRPS1-201ENST00000220888 STN1Q9H668 368 aaKnown RBP11.23□□□□□ -0.61
TRPS1-201ENST00000220888 BFARQ9NZS9 450 aa11.23□□□□□ -0.61
TRPS1-201ENST00000220888 ADAMTS12P58397 1594 aa11.23□□□□□ -0.61
TRPS1-201ENST00000220888 IGSF3O75054 1194 aa11.23□□□□□ -0.61
TRPS1-201ENST00000220888 NPM3O75607 178 aaKnown RBP11.23□□□□□ -0.61
TRPS1-201ENST00000220888 HIST1H2AGP0C0S8 130 aaPredicted RBP11.23□□□□□ -0.61
TRPS1-201ENST00000220888 ITGA4P13612 1032 aa11.23□□□□□ -0.61
TRPS1-201ENST00000220888 HIST1H2ADP20671 130 aa11.23□□□□□ -0.61
TRPS1-201ENST00000220888 CCT5P48643 541 aa11.23□□□□□ -0.61
TRPS1-201ENST00000220888 BLVRAP53004 296 aa11.23□□□□□ -0.61
TRPS1-201ENST00000220888 NR1H3Q13133 447 aa11.23□□□□□ -0.61
TRPS1-201ENST00000220888 ALKBH5Q6P6C2 394 aaKnown RBP11.23□□□□□ -0.61
TRPS1-201ENST00000220888 LDHDQ86WU2 507 aa11.23□□□□□ -0.61
TRPS1-201ENST00000220888 GRAMD1CQ8IYS0 662 aa11.23□□□□□ -0.61
TRPS1-201ENST00000220888 C17orf53Q8N3J3 647 aaPredicted RBP11.23□□□□□ -0.61
TRPS1-201ENST00000220888 ZNF280CQ8ND82 737 aa11.23□□□□□ -0.61
TRPS1-201ENST00000220888 APPL2Q8NEU8 664 aa11.23□□□□□ -0.61
TRPS1-201ENST00000220888 HIST1H2AHQ96KK5 128 aa11.23□□□□□ -0.61
TRPS1-201ENST00000220888 HIST1H2AJQ99878 128 aa11.23□□□□□ -0.61
TRPS1-201ENST00000220888 C11orf70Q9BRQ4 267 aa11.23□□□□□ -0.61
TRPS1-201ENST00000220888 H2AFJQ9BTM1 129 aa11.23□□□□□ -0.61
TRPS1-201ENST00000220888 DHX35Q9H5Z1 703 aaKnown RBP11.23□□□□□ -0.61
TRPS1-201ENST00000220888 RGL1Q9NZL6 768 aa11.23□□□□□ -0.61
TRPS1-201ENST00000220888 FAF1Q9UNN5 650 aaPredicted RBP11.23□□□□□ -0.61
TRPS1-201ENST00000220888 GGPS1O95749 300 aa11.22□□□□□ -0.61
TRPS1-201ENST00000220888 SYF2O95926 243 aaKnown RBP11.22□□□□□ -0.61
TRPS1-201ENST00000220888 PRKCBP05771 671 aa11.22□□□□□ -0.61
TRPS1-201ENST00000220888 CYFIP1Q7L576 1253 aa11.22□□□□□ -0.61
TRPS1-201ENST00000220888 MTBPQ96DY7 904 aa11.22□□□□□ -0.61
TRPS1-201ENST00000220888 TUBB6Q9BUF5 446 aa11.22□□□□□ -0.61
TRPS1-201ENST00000220888 PLEKHA5Q9HAU0 1116 aa11.22□□□□□ -0.61
TRPS1-201ENST00000220888 RBAKQ9NYW8 714 aaPredicted RBP11.22□□□□□ -0.61
TRPS1-201ENST00000220888 PCSK1NQ9UHG2 260 aa11.22□□□□□ -0.61
TRPS1-201ENST00000220888 ENC1O14682 589 aa11.22□□□□□ -0.61
TRPS1-201ENST00000220888 SRGAP2O75044 1071 aa11.22□□□□□ -0.61
TRPS1-201ENST00000220888 ZNF189O75820 626 aaPredicted RBP11.22□□□□□ -0.61
TRPS1-201ENST00000220888 NR3C1P04150 777 aa11.22□□□□□ -0.61
TRPS1-201ENST00000220888 ZNF445P59923 1031 aa11.22□□□□□ -0.61
TRPS1-201ENST00000220888 DHX9Q08211 1270 aaKnown RBP11.22□□□□□ -0.61
TRPS1-201ENST00000220888 RBL2Q08999 1139 aa11.22□□□□□ -0.61
TRPS1-201ENST00000220888 TAGAPQ8N103 731 aa11.22□□□□□ -0.61
TRPS1-201ENST00000220888 EIF2AQ9BY44 585 aaKnown RBP11.22□□□□□ -0.61
TRPS1-201ENST00000220888 VPS11Q9H270 941 aa11.22□□□□□ -0.61
TRPS1-201ENST00000220888 STAP2Q9UGK3 403 aa11.22□□□□□ -0.61
TRPS1-201ENST00000220888 WDR91A4D1P6 747 aa11.22□□□□□ -0.61
TRPS1-201ENST00000220888 SLC25A27O95847 323 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms