RNA–Protein interactions for RNA: ENST00000219299.8

CCDC113-201, Transcript of coiled-coil domain containing 113, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC113, Length 5,272 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC113-201ENST00000219299 RDM1Q8NG50 284 aa10.15□□□□□ -0.78
CCDC113-201ENST00000219299 AGO4Q9HCK5 861 aaKnown RBP10.15□□□□□ -0.78
CCDC113-201ENST00000219299 ANKEF1Q9NU02 776 aa10.15□□□□□ -0.78
CCDC113-201ENST00000219299 H3BRB1 525 aa10.15□□□□□ -0.78
CCDC113-201ENST00000219299 PRKCBP05771 671 aa10.15□□□□□ -0.78
CCDC113-201ENST00000219299 SUPT20HL2P0C7V6 817 aa10.15□□□□□ -0.78
CCDC113-201ENST00000219299 TRIM49P0CI25 452 aa10.15□□□□□ -0.78
CCDC113-201ENST00000219299 TRIM49CP0CI26 452 aa10.15□□□□□ -0.78
CCDC113-201ENST00000219299 HOXA7P31268 230 aaPredicted RBP10.15□□□□□ -0.78
CCDC113-201ENST00000219299 SLC8A1P32418 973 aa10.15□□□□□ -0.78
CCDC113-201ENST00000219299 NLRP11P59045 1033 aaKnown RBP10.15□□□□□ -0.78
CCDC113-201ENST00000219299 SP3Q02447 781 aa10.15□□□□□ -0.78
CCDC113-201ENST00000219299 GRB10Q13322 594 aa10.15□□□□□ -0.78
CCDC113-201ENST00000219299 MTMR3Q13615 1198 aa10.15□□□□□ -0.78
CCDC113-201ENST00000219299 VSIG10LQ86VR7 867 aa10.15□□□□□ -0.78
CCDC113-201ENST00000219299 TRAF3IP1Q8TDR0 691 aaPredicted RBP10.15□□□□□ -0.78
CCDC113-201ENST00000219299 CCDC51Q96ER9 411 aa10.15□□□□□ -0.78
CCDC113-201ENST00000219299 TUT1Q9H6E5 874 aaKnown RBP10.15□□□□□ -0.78
CCDC113-201ENST00000219299 AGO2Q9UKV8 859 aaKnown RBP10.15□□□□□ -0.78
CCDC113-201ENST00000219299 NUP98P52948 1817 aa10.15□□□□□ -0.79
CCDC113-201ENST00000219299 CYP11B2P19099 503 aa10.15□□□□□ -0.79
CCDC113-201ENST00000219299 GCKP35557 465 aa10.15□□□□□ -0.79
CCDC113-201ENST00000219299 FUT2Q10981 343 aa10.15□□□□□ -0.79
CCDC113-201ENST00000219299 SURF1Q15526 300 aa10.15□□□□□ -0.79
CCDC113-201ENST00000219299 ZNF394Q53GI3 561 aa10.15□□□□□ -0.79
CCDC113-201ENST00000219299 RINT1Q6NUQ1 792 aa10.15□□□□□ -0.79
CCDC113-201ENST00000219299 CEP128Q6ZU80 1094 aa10.15□□□□□ -0.79
CCDC113-201ENST00000219299 CDR2LQ86X02 465 aaPredicted RBP10.15□□□□□ -0.79
CCDC113-201ENST00000219299 KSR1Q8IVT5 923 aa10.15□□□□□ -0.79
CCDC113-201ENST00000219299 NKX2-3Q8TAU0 364 aa10.15□□□□□ -0.79
CCDC113-201ENST00000219299 CAPNS2Q96L46 248 aa10.15□□□□□ -0.79
CCDC113-201ENST00000219299 KIFC3Q9BVG8 833 aa10.15□□□□□ -0.79
CCDC113-201ENST00000219299 PPP1R12CQ9BZL4 782 aa10.15□□□□□ -0.79
CCDC113-201ENST00000219299 AFG3L2Q9Y4W6 797 aa10.15□□□□□ -0.79
CCDC113-201ENST00000219299 GOLGA8KD6RF30 607 aa10.14□□□□□ -0.79
CCDC113-201ENST00000219299 TFRCP02786 760 aaKnown RBP10.14□□□□□ -0.79
CCDC113-201ENST00000219299 SNHG28P0DPA3 235 aa10.14□□□□□ -0.79
CCDC113-201ENST00000219299 CLCN3P51790 818 aa10.14□□□□□ -0.79
CCDC113-201ENST00000219299 KCNH2Q12809 1159 aa10.14□□□□□ -0.79
CCDC113-201ENST00000219299 MYO1EQ12965 1108 aa10.14□□□□□ -0.79
CCDC113-201ENST00000219299 ANKRD40Q6AI12 368 aa10.14□□□□□ -0.79
CCDC113-201ENST00000219299 RABEP2Q9H5N1 569 aa10.14□□□□□ -0.79
CCDC113-201ENST00000219299 KIAA1586Q9HCI6 787 aa10.14□□□□□ -0.79
CCDC113-201ENST00000219299 BAIAP2L1Q9UHR4 511 aa10.14□□□□□ -0.79
CCDC113-201ENST00000219299 TSKSQ9UJT2 592 aa10.14□□□□□ -0.79
CCDC113-201ENST00000219299 COMMD10Q9Y6G5 202 aa10.14□□□□□ -0.79
CCDC113-201ENST00000219299 ITGB4P16144 1822 aa10.14□□□□□ -0.79
CCDC113-201ENST00000219299 ADCYAP1R1P41586 468 aa10.14□□□□□ -0.79
CCDC113-201ENST00000219299 ARPP19P56211 112 aa10.14□□□□□ -0.79
CCDC113-201ENST00000219299 DPYDQ12882 1025 aa10.14□□□□□ -0.79
CCDC113-201ENST00000219299 PPP1R7Q15435 360 aa10.14□□□□□ -0.79
CCDC113-201ENST00000219299 Q4G0T1 1027 aa10.14□□□□□ -0.79
CCDC113-201ENST00000219299 LBX2Q6XYB7 198 aa10.14□□□□□ -0.79
CCDC113-201ENST00000219299 GSTA5Q7RTV2 222 aa10.14□□□□□ -0.79
CCDC113-201ENST00000219299 CCDC25Q86WR0 208 aa10.14□□□□□ -0.79
CCDC113-201ENST00000219299 LRRC8AQ8IWT6 810 aa10.14□□□□□ -0.79
CCDC113-201ENST00000219299 MYPNQ86TC9 1320 aa10.14□□□□□ -0.79
CCDC113-201ENST00000219299 RSPH10B2B2RC85 870 aa10.14□□□□□ -0.79
CCDC113-201ENST00000219299 RSPH10BP0C881 870 aa10.14□□□□□ -0.79
CCDC113-201ENST00000219299 ACOT2P49753 483 aa10.14□□□□□ -0.79
CCDC113-201ENST00000219299 GNGT1P63211 74 aa10.14□□□□□ -0.79
CCDC113-201ENST00000219299 RRP1BQ14684 758 aaKnown RBP10.14□□□□□ -0.79
CCDC113-201ENST00000219299 PTPROQ16827 1216 aa10.14□□□□□ -0.79
CCDC113-201ENST00000219299 PRAMEF19Q5SWL8 479 aa10.14□□□□□ -0.79
CCDC113-201ENST00000219299 SYT2Q8N9I0 419 aaPredicted RBP10.14□□□□□ -0.79
CCDC113-201ENST00000219299 ENGASEQ8NFI3 743 aa10.14□□□□□ -0.79
CCDC113-201ENST00000219299 CYP26B1Q9NR63 512 aa10.14□□□□□ -0.79
CCDC113-201ENST00000219299 RRP15Q9Y3B9 282 aaKnown RBP10.14□□□□□ -0.79
CCDC113-201ENST00000219299 XIRP1Q702N8 1843 aaKnown RBP10.14□□□□□ -0.79
CCDC113-201ENST00000219299 E7EVH7 732 aa10.14□□□□□ -0.79
CCDC113-201ENST00000219299 GFPT2O94808 682 aa10.14□□□□□ -0.79
CCDC113-201ENST00000219299 PLS3P13797 630 aa10.14□□□□□ -0.79
CCDC113-201ENST00000219299 ATN1P54259 1190 aaPredicted RBP10.14□□□□□ -0.79
CCDC113-201ENST00000219299 SH3BGRP55822 239 aaPredicted RBP10.14□□□□□ -0.79
CCDC113-201ENST00000219299 RBL2Q08999 1139 aa10.14□□□□□ -0.79
CCDC113-201ENST00000219299 IER5Q5VY09 327 aa10.14□□□□□ -0.79
CCDC113-201ENST00000219299 LMBRD2Q68DH5 695 aaPredicted RBP10.14□□□□□ -0.79
CCDC113-201ENST00000219299 TAOK1Q7L7X3 1001 aa10.14□□□□□ -0.79
CCDC113-201ENST00000219299 SOCS4Q8WXH5 440 aa10.14□□□□□ -0.79
CCDC113-201ENST00000219299 SNX25Q9H3E2 840 aa10.14□□□□□ -0.79
CCDC113-201ENST00000219299 RBAKQ9NYW8 714 aaPredicted RBP10.14□□□□□ -0.79
CCDC113-201ENST00000219299 ATRNL1Q5VV63 1379 aa10.14□□□□□ -0.79
CCDC113-201ENST00000219299 TBC1D8O95759 1140 aa10.13□□□□□ -0.79
CCDC113-201ENST00000219299 MYBP10242 640 aa10.13□□□□□ -0.79
CCDC113-201ENST00000219299 FYB2Q5VWT5 728 aa10.13□□□□□ -0.79
CCDC113-201ENST00000219299 DSTYKQ6XUX3 929 aa10.13□□□□□ -0.79
CCDC113-201ENST00000219299 IL31RAQ8NI17 732 aa10.13□□□□□ -0.79
CCDC113-201ENST00000219299 TINF2Q9BSI4 451 aa10.13□□□□□ -0.79
CCDC113-201ENST00000219299 VCX3BQ9H321 246 aa10.13□□□□□ -0.79
CCDC113-201ENST00000219299 SBDSQ9Y3A5 250 aaKnown RBP eCLIP10.13□□□□□ -0.79
CCDC113-201ENST00000219299 RHOBTB3O94955 611 aa10.13□□□□□ -0.79
CCDC113-201ENST00000219299 H2AFZP0C0S5 128 aa10.13□□□□□ -0.79
CCDC113-201ENST00000219299 ATP2A2P16615 1042 aaKnown RBP10.13□□□□□ -0.79
CCDC113-201ENST00000219299 KLRC1P26715 233 aa10.13□□□□□ -0.79
CCDC113-201ENST00000219299 RFC5P40937 340 aa10.13□□□□□ -0.79
CCDC113-201ENST00000219299 BPIFB4P59827 614 aa10.13□□□□□ -0.79
CCDC113-201ENST00000219299 PSMC6P62333 389 aa10.13□□□□□ -0.79
CCDC113-201ENST00000219299 ACVR2BQ13705 512 aa10.13□□□□□ -0.79
CCDC113-201ENST00000219299 H2AFVQ71UI9 128 aa10.13□□□□□ -0.79
CCDC113-201ENST00000219299 GPR142Q7Z601 462 aa10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms