RNA–Protein interactions for RNA: ENST00000216211.8

UPK3A-201, Transcript of uroplakin 3A, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene UPK3A, Length 1,051 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3A-201ENST00000216211 NAP1L4Q99733 375 aaKnown RBP16.78■□□□□ 0.28
UPK3A-201ENST00000216211 LXNQ9BS40 222 aa16.78■□□□□ 0.28
UPK3A-201ENST00000216211 TRAIPQ9BWF2 469 aa16.78■□□□□ 0.28
UPK3A-201ENST00000216211 APOL5Q9BWW9 433 aa16.78■□□□□ 0.28
UPK3A-201ENST00000216211 PHF7Q9BWX1 381 aaPredicted RBP16.78■□□□□ 0.28
UPK3A-201ENST00000216211 IFT122Q9HBG6 1241 aa16.78■□□□□ 0.28
UPK3A-201ENST00000216211 FAM105AQ9NUU6 356 aa16.78■□□□□ 0.28
UPK3A-201ENST00000216211 RGL1Q9NZL6 768 aa16.78■□□□□ 0.28
UPK3A-201ENST00000216211 COL4A3BPQ9Y5P4 624 aa16.78■□□□□ 0.28
UPK3A-201ENST00000216211 ZC3H11AO75152 810 aaKnown RBP eCLIP16.77■□□□□ 0.28
UPK3A-201ENST00000216211 SRGAP2CP0DJJ0 459 aa16.77■□□□□ 0.28
UPK3A-201ENST00000216211 SRGAP2BP0DMP2 458 aa16.77■□□□□ 0.28
UPK3A-201ENST00000216211 SKIP12755 728 aa16.77■□□□□ 0.28
UPK3A-201ENST00000216211 CA8P35219 290 aa16.77■□□□□ 0.28
UPK3A-201ENST00000216211 KRT2P35908 639 aa16.77■□□□□ 0.28
UPK3A-201ENST00000216211 CTTNQ14247 550 aaKnown RBP16.77■□□□□ 0.28
UPK3A-201ENST00000216211 SMC1AQ14683 1233 aaKnown RBP16.77■□□□□ 0.28
UPK3A-201ENST00000216211 TMEM184AQ6ZMB5 413 aa16.77■□□□□ 0.28
UPK3A-201ENST00000216211 C4orf19Q8IY42 314 aa16.77■□□□□ 0.28
UPK3A-201ENST00000216211 PRPF31Q8WWY3 499 aaKnown RBP16.77■□□□□ 0.28
UPK3A-201ENST00000216211 SUSD6Q92537 303 aa16.77■□□□□ 0.28
UPK3A-201ENST00000216211 RPGRIP1Q96KN7 1286 aa16.77■□□□□ 0.28
UPK3A-201ENST00000216211 DHX33Q9H6R0 707 aaKnown RBP16.77■□□□□ 0.28
UPK3A-201ENST00000216211 INPP5FQ9Y2H2 1132 aa16.77■□□□□ 0.28
UPK3A-201ENST00000216211 TECTAO75443 2155 aa16.77■□□□□ 0.27
UPK3A-201ENST00000216211 TDRD15B5MCY1 1934 aaKnown RBP16.76■□□□□ 0.27
UPK3A-201ENST00000216211 WDFY4Q6ZS81 3184 aa16.76■□□□□ 0.27
UPK3A-201ENST00000216211 C2orf71A6NGG8 1288 aa16.76■□□□□ 0.27
UPK3A-201ENST00000216211 ZBTB39O15060 712 aa16.76■□□□□ 0.27
UPK3A-201ENST00000216211 BAG4O95429 457 aaKnown RBP16.76■□□□□ 0.27
UPK3A-201ENST00000216211 YWHABP31946 246 aaKnown RBP16.76■□□□□ 0.27
UPK3A-201ENST00000216211 ANP32AP39687 249 aaKnown RBP16.76■□□□□ 0.27
UPK3A-201ENST00000216211 RFC5P40937 340 aa16.76■□□□□ 0.27
UPK3A-201ENST00000216211 ALDH7A1P49419 539 aaKnown RBP16.76■□□□□ 0.27
UPK3A-201ENST00000216211 FOSBP53539 338 aa16.76■□□□□ 0.27
UPK3A-201ENST00000216211 CYP4A11Q02928 519 aa16.76■□□□□ 0.27
UPK3A-201ENST00000216211 SPIRE1Q08AE8 756 aa16.76■□□□□ 0.27
UPK3A-201ENST00000216211 CBX2Q14781 532 aaPredicted RBP16.76■□□□□ 0.27
UPK3A-201ENST00000216211 SYCE2Q6PIF2 218 aa16.76■□□□□ 0.27
UPK3A-201ENST00000216211 HFE2Q6ZVN8 426 aa16.76■□□□□ 0.27
UPK3A-201ENST00000216211 PSPC1Q8WXF1 523 aaKnown RBP16.76■□□□□ 0.27
UPK3A-201ENST00000216211 TNFRSF25Q93038 417 aa16.76■□□□□ 0.27
UPK3A-201ENST00000216211 GTF3C6Q969F1 213 aa16.76■□□□□ 0.27
UPK3A-201ENST00000216211 TMEM169Q96HH4 297 aa16.76■□□□□ 0.27
UPK3A-201ENST00000216211 S1PR5Q9H228 398 aa16.76■□□□□ 0.27
UPK3A-201ENST00000216211 NRDE2Q9H7Z3 1164 aa16.76■□□□□ 0.27
UPK3A-201ENST00000216211 MINDY3Q9H8M7 445 aa16.76■□□□□ 0.27
UPK3A-201ENST00000216211 PPME1Q9Y570 386 aa16.76■□□□□ 0.27
UPK3A-201ENST00000216211 OFD1O75665 1012 aa16.75■□□□□ 0.27
UPK3A-201ENST00000216211 RAB27AP51159 221 aa16.75■□□□□ 0.27
UPK3A-201ENST00000216211 LAMTOR4Q0VGL1 99 aa16.75■□□□□ 0.27
UPK3A-201ENST00000216211 EMC2Q15006 297 aa16.75■□□□□ 0.27
UPK3A-201ENST00000216211 XKR9Q5GH70 373 aa16.75■□□□□ 0.27
UPK3A-201ENST00000216211 NOMO2Q5JPE7 1267 aa16.75■□□□□ 0.27
UPK3A-201ENST00000216211 GLB1LQ6UWU2 654 aa16.75■□□□□ 0.27
UPK3A-201ENST00000216211 OTUD6AQ7L8S5 288 aa16.75■□□□□ 0.27
UPK3A-201ENST00000216211 TMEM173Q86WV6 379 aaPredicted RBP16.75■□□□□ 0.27
UPK3A-201ENST00000216211 EXOC8Q8IYI6 725 aa16.75■□□□□ 0.27
UPK3A-201ENST00000216211 SLFN12Q8IYM2 578 aa16.75■□□□□ 0.27
UPK3A-201ENST00000216211 MRPL43Q8N983 215 aaKnown RBP16.75■□□□□ 0.27
UPK3A-201ENST00000216211 EDAQ92838 391 aa16.75■□□□□ 0.27
UPK3A-201ENST00000216211 ZSWIM4Q9H7M6 989 aa16.75■□□□□ 0.27
UPK3A-201ENST00000216211 BRMS1Q9HCU9 246 aa16.75■□□□□ 0.27
UPK3A-201ENST00000216211 AGPAT5Q9NUQ2 364 aa16.75■□□□□ 0.27
UPK3A-201ENST00000216211 TBC1D13Q9NVG8 400 aa16.75■□□□□ 0.27
UPK3A-201ENST00000216211 MUC6Q6W4X9 2439 aa16.74■□□□□ 0.27
UPK3A-201ENST00000216211 ZNF318Q5VUA4 2279 aa16.74■□□□□ 0.27
UPK3A-201ENST00000216211 CLASP2O75122 1294 aaKnown RBP16.74■□□□□ 0.27
UPK3A-201ENST00000216211 ZNF623O75123 536 aa16.74■□□□□ 0.27
UPK3A-201ENST00000216211 CXCL14O95715 111 aa16.74■□□□□ 0.27
UPK3A-201ENST00000216211 RNASELQ05823 741 aaKnown RBP16.74■□□□□ 0.27
UPK3A-201ENST00000216211 SRGAP1Q7Z6B7 1085 aa16.74■□□□□ 0.27
UPK3A-201ENST00000216211 TPH2Q8IWU9 490 aa16.74■□□□□ 0.27
UPK3A-201ENST00000216211 VPS52Q8N1B4 723 aa16.74■□□□□ 0.27
UPK3A-201ENST00000216211 NSUN7Q8NE18 718 aaKnown RBP16.74■□□□□ 0.27
UPK3A-201ENST00000216211 BCL7CQ8WUZ0 217 aaPredicted RBP16.74■□□□□ 0.27
UPK3A-201ENST00000216211 TCP11Q8WWU5 503 aa16.74■□□□□ 0.27
UPK3A-201ENST00000216211 AUTS2Q8WXX7 1259 aa16.74■□□□□ 0.27
UPK3A-201ENST00000216211 PGBD4Q96DM1 585 aa16.74■□□□□ 0.27
UPK3A-201ENST00000216211 MTRQ99707 1265 aa16.74■□□□□ 0.27
UPK3A-201ENST00000216211 GBP3Q9H0R5 595 aa16.74■□□□□ 0.27
UPK3A-201ENST00000216211 DNAJB4Q9UDY4 337 aa16.74■□□□□ 0.27
UPK3A-201ENST00000216211 CDH22Q9UJ99 828 aa16.74■□□□□ 0.27
UPK3A-201ENST00000216211 PCDHB2Q9Y5E7 798 aa16.74■□□□□ 0.27
UPK3A-201ENST00000216211 HCFC2Q9Y5Z7 792 aa16.74■□□□□ 0.27
UPK3A-201ENST00000216211 BTBD18B2RXH4 712 aa16.73■□□□□ 0.27
UPK3A-201ENST00000216211 WNT7AO00755 349 aa16.73■□□□□ 0.27
UPK3A-201ENST00000216211 GAS2O43903 313 aaKnown RBP16.73■□□□□ 0.27
UPK3A-201ENST00000216211 JAK2O60674 1132 aa16.73■□□□□ 0.27
UPK3A-201ENST00000216211 SLITRK3O94933 977 aa16.73■□□□□ 0.27
UPK3A-201ENST00000216211 SEC24BO95487 1268 aa16.73■□□□□ 0.27
UPK3A-201ENST00000216211 SP100P23497 879 aaPredicted RBP16.73■□□□□ 0.27
UPK3A-201ENST00000216211 HOXD11P31277 338 aaPredicted RBP16.73■□□□□ 0.27
UPK3A-201ENST00000216211 NEK4P51957 841 aa16.73■□□□□ 0.27
UPK3A-201ENST00000216211 UBXN11Q5T124 520 aa16.73■□□□□ 0.27
UPK3A-201ENST00000216211 AGMOQ6ZNB7 445 aa16.73■□□□□ 0.27
UPK3A-201ENST00000216211 FERMT3Q86UX7 667 aa16.73■□□□□ 0.27
UPK3A-201ENST00000216211 ZNF280BQ86YH2 543 aa16.73■□□□□ 0.27
UPK3A-201ENST00000216211 RNF149Q8NC42 400 aa16.73■□□□□ 0.27
UPK3A-201ENST00000216211 RSPH1Q8WYR4 309 aa16.73■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms