RNA–Protein interactions for RNA: ENST00000194152.3

PCDHB4-201, Transcript of protocadherin beta 4, humanhuman

APPRIS P1 BASIC

Gene PCDHB4, Length 3,825 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB4-201ENST00000194152 RIPK3Q9Y572 518 aa13.94□□□□□ -0.18
PCDHB4-201ENST00000194152 LAMB4A4D0S4 1761 aa13.94□□□□□ -0.18
PCDHB4-201ENST00000194152 CCDC189A1A4V9 331 aa13.94□□□□□ -0.18
PCDHB4-201ENST00000194152 ZSCAN5CA6NGD5 496 aaPredicted RBP13.94□□□□□ -0.18
PCDHB4-201ENST00000194152 OPLAHO14841 1288 aa13.94□□□□□ -0.18
PCDHB4-201ENST00000194152 CTNNA2P26232 953 aa13.94□□□□□ -0.18
PCDHB4-201ENST00000194152 QARSP47897 775 aaKnown RBP13.94□□□□□ -0.18
PCDHB4-201ENST00000194152 CCNI2Q6ZMN8 369 aaPredicted RBP13.94□□□□□ -0.18
PCDHB4-201ENST00000194152 TBC1D1Q86TI0 1168 aaPredicted RBP13.94□□□□□ -0.18
PCDHB4-201ENST00000194152 NLGN2Q8NFZ4 835 aa13.94□□□□□ -0.18
PCDHB4-201ENST00000194152 APOL6Q9BWW8 343 aa13.94□□□□□ -0.18
PCDHB4-201ENST00000194152 NFU1Q9UMS0 254 aa13.94□□□□□ -0.18
PCDHB4-201ENST00000194152 ANKRD62A6NC57 917 aa13.94□□□□□ -0.18
PCDHB4-201ENST00000194152 SLITRK3O94933 977 aa13.94□□□□□ -0.18
PCDHB4-201ENST00000194152 EYA4O95677 639 aa13.94□□□□□ -0.18
PCDHB4-201ENST00000194152 NR3C2P08235 984 aa13.94□□□□□ -0.18
PCDHB4-201ENST00000194152 UCHL3P15374 230 aa13.94□□□□□ -0.18
PCDHB4-201ENST00000194152 TMOD1P28289 359 aa13.94□□□□□ -0.18
PCDHB4-201ENST00000194152 YWHABP31946 246 aaKnown RBP13.94□□□□□ -0.18
PCDHB4-201ENST00000194152 TRIP13Q15645 432 aaPredicted RBP13.94□□□□□ -0.18
PCDHB4-201ENST00000194152 CYB5D1Q6P9G0 228 aa13.94□□□□□ -0.18
PCDHB4-201ENST00000194152 DNAJC19Q96DA6 116 aa13.94□□□□□ -0.18
PCDHB4-201ENST00000194152 FAM118BQ9BPY3 351 aa13.94□□□□□ -0.18
PCDHB4-201ENST00000194152 DDX47Q9H0S4 455 aaKnown RBP13.94□□□□□ -0.18
PCDHB4-201ENST00000194152 VIPAS39Q9H9C1 493 aa13.94□□□□□ -0.18
PCDHB4-201ENST00000194152 DDX20Q9UHI6 824 aaKnown RBP13.94□□□□□ -0.18
PCDHB4-201ENST00000194152 DMGDHQ9UI17 866 aaKnown RBP13.94□□□□□ -0.18
PCDHB4-201ENST00000194152 PCNTO95613 3336 aa13.93□□□□□ -0.18
PCDHB4-201ENST00000194152 CNTN2Q02246 1040 aa13.93□□□□□ -0.18
PCDHB4-201ENST00000194152 SEPT7Q16181 437 aaKnown RBP13.93□□□□□ -0.18
PCDHB4-201ENST00000194152 ARSHQ5FYA8 562 aa13.93□□□□□ -0.18
PCDHB4-201ENST00000194152 PDXDC1Q6P996 788 aa13.93□□□□□ -0.18
PCDHB4-201ENST00000194152 NLRP14Q86W24 1093 aa13.93□□□□□ -0.18
PCDHB4-201ENST00000194152 CCDC170Q8IYT3 715 aa13.93□□□□□ -0.18
PCDHB4-201ENST00000194152 PARD3BQ8TEW8 1205 aa13.93□□□□□ -0.18
PCDHB4-201ENST00000194152 NXF1Q9UBU9 619 aaKnown RBP13.93□□□□□ -0.18
PCDHB4-201ENST00000194152 NUP188Q5SRE5 1749 aa13.93□□□□□ -0.18
PCDHB4-201ENST00000194152 GNA14O95837 355 aa13.93□□□□□ -0.18
PCDHB4-201ENST00000194152 MXI1P50539 228 aa13.93□□□□□ -0.18
PCDHB4-201ENST00000194152 PIK3R5Q8WYR1 880 aa13.93□□□□□ -0.18
PCDHB4-201ENST00000194152 AZI2Q9H6S1 392 aa13.93□□□□□ -0.18
PCDHB4-201ENST00000194152 SLC8A1P32418 973 aa13.93□□□□□ -0.18
PCDHB4-201ENST00000194152 SREBF1P36956 1147 aa13.93□□□□□ -0.18
PCDHB4-201ENST00000194152 PAK2Q13177 524 aa13.93□□□□□ -0.18
PCDHB4-201ENST00000194152 MTM1Q13496 603 aa13.93□□□□□ -0.18
PCDHB4-201ENST00000194152 KRT71Q3SY84 523 aa13.93□□□□□ -0.18
PCDHB4-201ENST00000194152 APTXQ7Z2E3 356 aaKnown RBP13.93□□□□□ -0.18
PCDHB4-201ENST00000194152 CACNA2D3Q8IZS8 1091 aa13.93□□□□□ -0.18
PCDHB4-201ENST00000194152 MCM8Q9UJA3 840 aa13.93□□□□□ -0.18
PCDHB4-201ENST00000194152 ADM5C9JUS6 153 aa13.92□□□□□ -0.18
PCDHB4-201ENST00000194152 IRF6O14896 467 aa13.92□□□□□ -0.18
PCDHB4-201ENST00000194152 POTEJP0CG39 1038 aa13.92□□□□□ -0.18
PCDHB4-201ENST00000194152 ITGB5P18084 799 aa13.92□□□□□ -0.18
PCDHB4-201ENST00000194152 CRYMQ14894 314 aa13.92□□□□□ -0.18
PCDHB4-201ENST00000194152 SPDYE2Q495Y8 402 aa13.92□□□□□ -0.18
PCDHB4-201ENST00000194152 DDX42Q86XP3 938 aaKnown RBP eCLIP13.92□□□□□ -0.18
PCDHB4-201ENST00000194152 NSMCE1Q8WV22 266 aa13.92□□□□□ -0.18
PCDHB4-201ENST00000194152 LAMA4Q16363 1823 aa13.92□□□□□ -0.18
PCDHB4-201ENST00000194152 SERPING1P05155 500 aa13.92□□□□□ -0.18
PCDHB4-201ENST00000194152 FAM133BQ5BKY9 247 aaKnown RBP13.92□□□□□ -0.18
PCDHB4-201ENST00000194152 MIIPQ5JXC2 388 aa13.92□□□□□ -0.18
PCDHB4-201ENST00000194152 KAZNQ674X7 775 aa13.92□□□□□ -0.18
PCDHB4-201ENST00000194152 CAPRIN2Q6IMN6 1127 aaKnown RBP13.92□□□□□ -0.18
PCDHB4-201ENST00000194152 LRRC71Q8N4P6 559 aa13.92□□□□□ -0.18
PCDHB4-201ENST00000194152 TRPM4Q8TD43 1214 aa13.92□□□□□ -0.18
PCDHB4-201ENST00000194152 AS3MTQ9HBK9 375 aa13.92□□□□□ -0.18
PCDHB4-201ENST00000194152 REXO2Q9Y3B8 237 aaKnown RBP13.92□□□□□ -0.18
PCDHB4-201ENST00000194152 XIRP1Q702N8 1843 aaKnown RBP13.92□□□□□ -0.18
PCDHB4-201ENST00000194152 NWD2Q9ULI1 1742 aa13.92□□□□□ -0.18
PCDHB4-201ENST00000194152 ONECUT3O60422 494 aaPredicted RBP13.92□□□□□ -0.18
PCDHB4-201ENST00000194152 TFAMQ00059 246 aaKnown RBP13.92□□□□□ -0.18
PCDHB4-201ENST00000194152 PREPLQ4J6C6 727 aaPredicted RBP13.92□□□□□ -0.18
PCDHB4-201ENST00000194152 TRIM50Q86XT4 487 aa13.92□□□□□ -0.18
PCDHB4-201ENST00000194152 SPDYE1Q8NFV5 336 aaPredicted RBP13.92□□□□□ -0.18
PCDHB4-201ENST00000194152 KAT5Q92993 513 aa13.92□□□□□ -0.18
PCDHB4-201ENST00000194152 MTMR8Q96EF0 704 aa13.92□□□□□ -0.18
PCDHB4-201ENST00000194152 TYW1Q9NV66 732 aaKnown RBP13.92□□□□□ -0.18
PCDHB4-201ENST00000194152 MYO3BQ8WXR4 1341 aa13.91□□□□□ -0.18
PCDHB4-201ENST00000194152 A0A1W2PQC6 194 aa13.91□□□□□ -0.18
PCDHB4-201ENST00000194152 M0R2N6 131 aa13.91□□□□□ -0.18
PCDHB4-201ENST00000194152 SPATA31C1P0DKV0 1188 aa13.91□□□□□ -0.18
PCDHB4-201ENST00000194152 WDR93Q6P2C0 686 aa13.91□□□□□ -0.18
PCDHB4-201ENST00000194152 GSTA5Q7RTV2 222 aa13.91□□□□□ -0.18
PCDHB4-201ENST00000194152 CBWD2Q8IUF1 395 aa13.91□□□□□ -0.18
PCDHB4-201ENST00000194152 SYT2Q8N9I0 419 aaPredicted RBP13.91□□□□□ -0.18
PCDHB4-201ENST00000194152 ZNF280CQ8ND82 737 aa13.91□□□□□ -0.18
PCDHB4-201ENST00000194152 TTC16Q8NEE8 873 aa13.91□□□□□ -0.18
PCDHB4-201ENST00000194152 SPIRE2Q8WWL2 714 aa13.91□□□□□ -0.18
PCDHB4-201ENST00000194152 BTBD6Q96KE9 485 aa13.91□□□□□ -0.18
PCDHB4-201ENST00000194152 RPGRIP1Q96KN7 1286 aa13.91□□□□□ -0.18
PCDHB4-201ENST00000194152 MXRA8Q9BRK3 442 aa13.91□□□□□ -0.18
PCDHB4-201ENST00000194152 COL20A1Q9P218 1284 aa13.91□□□□□ -0.18
PCDHB4-201ENST00000194152 GGT7Q9UJ14 662 aa13.91□□□□□ -0.18
PCDHB4-201ENST00000194152 L3MBTL1Q9Y468 752 aa13.91□□□□□ -0.18
PCDHB4-201ENST00000194152 MYH3P11055 1940 aa13.91□□□□□ -0.18
PCDHB4-201ENST00000194152 GLI3P10071 1580 aa13.91□□□□□ -0.18
PCDHB4-201ENST00000194152 CYP26A1O43174 497 aa13.91□□□□□ -0.18
PCDHB4-201ENST00000194152 P4HBP07237 508 aaKnown RBP13.91□□□□□ -0.18
PCDHB4-201ENST00000194152 CTNNA1P35221 906 aaKnown RBP13.91□□□□□ -0.18
PCDHB4-201ENST00000194152 ZSWIM2Q8NEG5 633 aa13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms