RNA–Protein interactions for RNA: ENST00000156825.5

MBD3-201, Transcript of methyl-CpG binding domain protein 3, humanhuman

TSL 1 (best) BASIC

Gene MBD3, Length 5,518 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3-201ENST00000156825 RASA1P20936 1047 aa20.12■□□□□ 0.81
MBD3-201ENST00000156825 PDIA6Q15084 440 aa20.12■□□□□ 0.81
MBD3-201ENST00000156825 ATP1A1P05023 1023 aaKnown RBP20.12■□□□□ 0.81
MBD3-201ENST00000156825 TXNP10599 105 aaKnown RBP20.12■□□□□ 0.81
MBD3-201ENST00000156825 KRT3P12035 628 aa20.12■□□□□ 0.81
MBD3-201ENST00000156825 NME3Q13232 169 aa20.12■□□□□ 0.81
MBD3-201ENST00000156825 EMBQ6PCB8 327 aa20.12■□□□□ 0.81
MBD3-201ENST00000156825 SPATS2Q86XZ4 545 aaKnown RBP20.12■□□□□ 0.81
MBD3-201ENST00000156825 CCHCR1Q8TD31 782 aa20.12■□□□□ 0.81
MBD3-201ENST00000156825 C1orf54Q8WWF1 131 aa20.12■□□□□ 0.81
MBD3-201ENST00000156825 LRGUKQ96M69 825 aa20.12■□□□□ 0.81
MBD3-201ENST00000156825 SOX5P35711 763 aa20.11■□□□□ 0.81
MBD3-201ENST00000156825 SYCP2LQ5T4T6 812 aa20.11■□□□□ 0.81
MBD3-201ENST00000156825 STRIP1Q5VSL9 837 aa20.11■□□□□ 0.81
MBD3-201ENST00000156825 ADAM33Q9BZ11 813 aa20.11■□□□□ 0.81
MBD3-201ENST00000156825 SIK2Q9H0K1 926 aa20.11■□□□□ 0.81
MBD3-201ENST00000156825 GOLGA8CPA6NN73 597 aa20.11■□□□□ 0.81
MBD3-201ENST00000156825 EPHA7Q15375 998 aa20.11■□□□□ 0.81
MBD3-201ENST00000156825 TMEM39BQ9GZU3 492 aa20.11■□□□□ 0.81
MBD3-201ENST00000156825 JPH1Q9HDC5 661 aaPredicted RBP20.11■□□□□ 0.81
MBD3-201ENST00000156825 CUL1Q13616 776 aa20.11■□□□□ 0.81
MBD3-201ENST00000156825 HIPK4Q8NE63 616 aa20.11■□□□□ 0.81
MBD3-201ENST00000156825 MRPL4Q9BYD3 311 aaKnown RBP20.11■□□□□ 0.81
MBD3-201ENST00000156825 TMEM60Q9H2L4 133 aa20.11■□□□□ 0.81
MBD3-201ENST00000156825 KLHL11Q9NVR0 708 aa20.11■□□□□ 0.81
MBD3-201ENST00000156825 LAMC1P11047 1609 aa20.11■□□□□ 0.81
MBD3-201ENST00000156825 MIF4GDA9UHW6 222 aaKnown RBP20.11■□□□□ 0.81
MBD3-201ENST00000156825 FDPSP14324 419 aaKnown RBP20.11■□□□□ 0.81
MBD3-201ENST00000156825 SDC4P31431 198 aa20.11■□□□□ 0.81
MBD3-201ENST00000156825 GRIN1Q05586 938 aa20.11■□□□□ 0.81
MBD3-201ENST00000156825 CACNB2Q08289 660 aaPredicted RBP20.11■□□□□ 0.81
MBD3-201ENST00000156825 ALS2CLQ60I27 953 aa20.11■□□□□ 0.81
MBD3-201ENST00000156825 ALDH8A1Q9H2A2 487 aaPredicted RBP20.11■□□□□ 0.81
MBD3-201ENST00000156825 LIMA1Q9UHB6 759 aaKnown RBP20.11■□□□□ 0.81
MBD3-201ENST00000156825 ATP8B3O60423 1300 aa20.11■□□□□ 0.81
MBD3-201ENST00000156825 SYNGAP1Q96PV0 1343 aa20.11■□□□□ 0.81
MBD3-201ENST00000156825 HABP4Q5JVS0 413 aaKnown RBP20.1■□□□□ 0.81
MBD3-201ENST00000156825 A0A0G2JND7 137 aa20.1■□□□□ 0.81
MBD3-201ENST00000156825 A8MXQ7 604 aa20.1■□□□□ 0.81
MBD3-201ENST00000156825 EYA4O95677 639 aa20.1■□□□□ 0.81
MBD3-201ENST00000156825 STAT5BP51692 787 aa20.1■□□□□ 0.81
MBD3-201ENST00000156825 FAM102AQ5T9C2 384 aaPredicted RBP20.1■□□□□ 0.81
MBD3-201ENST00000156825 BEST2Q8NFU1 509 aa20.1■□□□□ 0.81
MBD3-201ENST00000156825 SLC30A5Q8TAD4 765 aa20.1■□□□□ 0.81
MBD3-201ENST00000156825 PRR12Q9ULL5 1215 aa20.1■□□□□ 0.81
MBD3-201ENST00000156825 HIBCHQ6NVY1 386 aaPredicted RBP20.1■□□□□ 0.81
MBD3-201ENST00000156825 KIF12Q96FN5 646 aa20.1■□□□□ 0.81
MBD3-201ENST00000156825 KLC2Q9H0B6 622 aa20.1■□□□□ 0.81
MBD3-201ENST00000156825 SEL1LQ9UBV2 794 aa20.1■□□□□ 0.81
MBD3-201ENST00000156825 RASA4BC9J798 803 aa20.1■□□□□ 0.81
MBD3-201ENST00000156825 RASA4O43374 803 aa20.1■□□□□ 0.81
MBD3-201ENST00000156825 GGCXP38435 758 aa20.1■□□□□ 0.81
MBD3-201ENST00000156825 SNCBQ16143 134 aa20.1■□□□□ 0.81
MBD3-201ENST00000156825 WDR72Q3MJ13 1102 aa20.1■□□□□ 0.81
MBD3-201ENST00000156825 TMED8Q6PL24 325 aaPredicted RBP20.1■□□□□ 0.81
MBD3-201ENST00000156825 RBM41Q96IZ5 413 aaKnown RBP20.1■□□□□ 0.81
MBD3-201ENST00000156825 FGD4Q96M96 766 aa20.1■□□□□ 0.81
MBD3-201ENST00000156825 CRAMP1Q96RY5 1269 aa20.1■□□□□ 0.81
MBD3-201ENST00000156825 PDHBP11177 359 aa20.1■□□□□ 0.81
MBD3-201ENST00000156825 MAP2K2P36507 400 aa20.1■□□□□ 0.81
MBD3-201ENST00000156825 RFX5P48382 616 aaPredicted RBP20.1■□□□□ 0.81
MBD3-201ENST00000156825 FBXL13Q8NEE6 735 aa20.1■□□□□ 0.81
MBD3-201ENST00000156825 REEP2Q9BRK0 252 aa20.1■□□□□ 0.81
MBD3-201ENST00000156825 TNFAIP2Q03169 654 aa20.09■□□□□ 0.81
MBD3-201ENST00000156825 ZC2HC1CQ53FD0 456 aaPredicted RBP20.09■□□□□ 0.81
MBD3-201ENST00000156825 PLA2G4FQ68DD2 849 aa20.09■□□□□ 0.81
MBD3-201ENST00000156825 AGPAT5Q9NUQ2 364 aa20.09■□□□□ 0.81
MBD3-201ENST00000156825 QRICH2Q9H0J4 1663 aa20.09■□□□□ 0.81
MBD3-201ENST00000156825 ARHGEF37A1IGU5 675 aa20.09■□□□□ 0.81
MBD3-201ENST00000156825 PODXLO00592 558 aa20.09■□□□□ 0.81
MBD3-201ENST00000156825 GGPS1O95749 300 aa20.09■□□□□ 0.81
MBD3-201ENST00000156825 TMEM62Q0P6H9 643 aa20.09■□□□□ 0.81
MBD3-201ENST00000156825 ANGEL2Q5VTE6 544 aaKnown RBP20.09■□□□□ 0.81
MBD3-201ENST00000156825 GPD1LQ8N335 351 aa20.09■□□□□ 0.81
MBD3-201ENST00000156825 PRPF31Q8WWY3 499 aaKnown RBP20.09■□□□□ 0.81
MBD3-201ENST00000156825 ASNSD1Q9NWL6 643 aa20.09■□□□□ 0.81
MBD3-201ENST00000156825 MYMKA6NI61 221 aa20.09■□□□□ 0.81
MBD3-201ENST00000156825 POLRMTO00411 1230 aaKnown RBP20.09■□□□□ 0.81
MBD3-201ENST00000156825 GNAT1P11488 350 aa20.09■□□□□ 0.81
MBD3-201ENST00000156825 PDE1CQ14123 709 aaPredicted RBP20.09■□□□□ 0.81
MBD3-201ENST00000156825 COG2Q14746 738 aa20.09■□□□□ 0.81
MBD3-201ENST00000156825 C6orf118Q5T5N4 469 aa20.09■□□□□ 0.81
MBD3-201ENST00000156825 TRIM59Q8IWR1 403 aa20.09■□□□□ 0.81
MBD3-201ENST00000156825 SPDYE1Q8NFV5 336 aaPredicted RBP20.09■□□□□ 0.81
MBD3-201ENST00000156825 ABCA6Q8N139 1617 aa20.09■□□□□ 0.81
MBD3-201ENST00000156825 ZNF185O15231 689 aa20.09■□□□□ 0.81
MBD3-201ENST00000156825 SPHKAPQ2M3C7 1700 aa20.09■□□□□ 0.81
MBD3-201ENST00000156825 TRIM67Q6ZTA4 783 aa20.09■□□□□ 0.81
MBD3-201ENST00000156825 SPATA31A1Q5TZJ5 1347 aa20.09■□□□□ 0.81
MBD3-201ENST00000156825 ZC3H18Q86VM9 953 aaKnown RBP20.08■□□□□ 0.81
MBD3-201ENST00000156825 DHX35Q9H5Z1 703 aaKnown RBP20.08■□□□□ 0.81
MBD3-201ENST00000156825 CIITAP33076 1130 aa20.08■□□□□ 0.81
MBD3-201ENST00000156825 CC2D1AQ6P1N0 951 aaPredicted RBP20.08■□□□□ 0.81
MBD3-201ENST00000156825 ZNF70Q9UC06 446 aaPredicted RBP20.08■□□□□ 0.81
MBD3-201ENST00000156825 DYNC1LI1Q9Y6G9 523 aaKnown RBP20.08■□□□□ 0.81
MBD3-201ENST00000156825 CALB1P05937 261 aa20.08■□□□□ 0.8
MBD3-201ENST00000156825 HOXA7P31268 230 aaPredicted RBP20.08■□□□□ 0.8
MBD3-201ENST00000156825 ARL4CP56559 192 aa20.08■□□□□ 0.8
MBD3-201ENST00000156825 TMPRSS15P98073 1019 aa20.08■□□□□ 0.8
MBD3-201ENST00000156825 GPS1Q13098 491 aa20.08■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms