RNA–Protein interactions for RNA: ENST00000054666.10

VAMP3-201, Transcript of vesicle associated membrane protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VAMP3, Length 2,205 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP3-201ENST00000054666 MATR3P43243 847 aaKnown RBP eCLIP8.97□□□□□ -0.97
VAMP3-201ENST00000054666 MXI1P50539 228 aa8.97□□□□□ -0.97
VAMP3-201ENST00000054666 NPEPPSP55786 919 aa8.97□□□□□ -0.97
VAMP3-201ENST00000054666 RPS6KA1Q15418 735 aa8.97□□□□□ -0.97
VAMP3-201ENST00000054666 ARHGAP44Q17R89 818 aa8.97□□□□□ -0.97
VAMP3-201ENST00000054666 CTNNBL1Q8WYA6 563 aaPredicted RBP8.97□□□□□ -0.97
VAMP3-201ENST00000054666 A1CFQ9NQ94 594 aaKnown RBP8.97□□□□□ -0.97
VAMP3-201ENST00000054666 KMT5AQ9NQR1 393 aa8.97□□□□□ -0.97
VAMP3-201ENST00000054666 SEPT11Q9NVA2 429 aaKnown RBP8.97□□□□□ -0.97
VAMP3-201ENST00000054666 CYP39A1Q9NYL5 469 aa8.97□□□□□ -0.97
VAMP3-201ENST00000054666 SLC9A2Q9UBY0 812 aa8.97□□□□□ -0.97
VAMP3-201ENST00000054666 SEPT9Q9UHD8 586 aaPredicted RBP8.97□□□□□ -0.97
VAMP3-201ENST00000054666 FZD1Q9UP38 647 aa8.97□□□□□ -0.97
VAMP3-201ENST00000054666 KIAA1217Q5T5P2 1943 aa8.97□□□□□ -0.97
VAMP3-201ENST00000054666 SPDYE16A6NNV3 312 aaPredicted RBP8.97□□□□□ -0.97
VAMP3-201ENST00000054666 H0YCG3 227 aa8.97□□□□□ -0.97
VAMP3-201ENST00000054666 CES2O00748 559 aa8.97□□□□□ -0.97
VAMP3-201ENST00000054666 DGAT1O75907 488 aa8.97□□□□□ -0.97
VAMP3-201ENST00000054666 KCNA2P16389 499 aa8.97□□□□□ -0.97
VAMP3-201ENST00000054666 SP4Q02446 784 aa8.97□□□□□ -0.97
VAMP3-201ENST00000054666 GLE1Q53GS7 698 aaKnown RBP8.97□□□□□ -0.97
VAMP3-201ENST00000054666 MIS18BP1Q6P0N0 1132 aa8.97□□□□□ -0.97
VAMP3-201ENST00000054666 ANO5Q75V66 913 aa8.97□□□□□ -0.97
VAMP3-201ENST00000054666 MAP4K3Q8IVH8 894 aa8.97□□□□□ -0.97
VAMP3-201ENST00000054666 CCDC102AQ96A19 550 aa8.97□□□□□ -0.97
VAMP3-201ENST00000054666 SGIP1Q9BQI5 828 aa8.97□□□□□ -0.97
VAMP3-201ENST00000054666 UBXN6Q9BZV1 441 aa8.97□□□□□ -0.97
VAMP3-201ENST00000054666 VIPAS39Q9H9C1 493 aa8.97□□□□□ -0.97
VAMP3-201ENST00000054666 PDE11AQ9HCR9 933 aa8.97□□□□□ -0.97
VAMP3-201ENST00000054666 TBX20Q9UMR3 447 aa8.97□□□□□ -0.97
VAMP3-201ENST00000054666 SSC5DA1L4H1 1573 aa8.97□□□□□ -0.97
VAMP3-201ENST00000054666 ARID2Q68CP9 1835 aa8.96□□□□□ -0.97
VAMP3-201ENST00000054666 DENND3A2RUS2 1198 aa8.96□□□□□ -0.97
VAMP3-201ENST00000054666 TISP43B9A030 160 aa8.96□□□□□ -0.97
VAMP3-201ENST00000054666 DDX3XO00571 662 aaKnown RBP eCLIP8.96□□□□□ -0.972e-7■■■■□ 23.7
VAMP3-201ENST00000054666 KCNK3O14649 394 aa8.96□□□□□ -0.97
VAMP3-201ENST00000054666 LRRN2O75325 713 aa8.96□□□□□ -0.97
VAMP3-201ENST00000054666 TNFAIP3P21580 790 aa8.96□□□□□ -0.97
VAMP3-201ENST00000054666 NPTX2P47972 431 aa8.96□□□□□ -0.97
VAMP3-201ENST00000054666 GCLMP48507 274 aa8.96□□□□□ -0.97
VAMP3-201ENST00000054666 PRKCEQ02156 737 aa8.96□□□□□ -0.97
VAMP3-201ENST00000054666 PRKG1Q13976 671 aa8.96□□□□□ -0.97
VAMP3-201ENST00000054666 TMEM161BQ8NDZ6 487 aa8.96□□□□□ -0.97
VAMP3-201ENST00000054666 CHST13Q8NET6 341 aa8.96□□□□□ -0.97
VAMP3-201ENST00000054666 DDX55Q8NHQ9 600 aaKnown RBP eCLIP8.96□□□□□ -0.97
VAMP3-201ENST00000054666 SPIRE2Q8WWL2 714 aa8.96□□□□□ -0.97
VAMP3-201ENST00000054666 RFFLQ8WZ73 363 aa8.96□□□□□ -0.97
VAMP3-201ENST00000054666 IFT74Q96LB3 600 aa8.96□□□□□ -0.97
VAMP3-201ENST00000054666 SELENOOQ9BVL4 669 aa8.96□□□□□ -0.97
VAMP3-201ENST00000054666 SUGCTQ9HAC7 445 aa8.96□□□□□ -0.97
VAMP3-201ENST00000054666 ATP6V0A4Q9HBG4 840 aa8.96□□□□□ -0.97
VAMP3-201ENST00000054666 STIM2Q9P246 746 aa8.96□□□□□ -0.97
VAMP3-201ENST00000054666 NENFQ9UMX5 172 aa8.96□□□□□ -0.97
VAMP3-201ENST00000054666 AFG3L2Q9Y4W6 797 aa8.96□□□□□ -0.97
VAMP3-201ENST00000054666 CSADQ9Y600 493 aa8.96□□□□□ -0.97
VAMP3-201ENST00000054666 WDR90Q96KV7 1748 aa8.96□□□□□ -0.97
VAMP3-201ENST00000054666 LOC285556D6RIA3 1793 aa8.96□□□□□ -0.97
VAMP3-201ENST00000054666 TMCO5BA8MYB1 307 aa8.96□□□□□ -0.98
VAMP3-201ENST00000054666 TULP1O00294 542 aaPredicted RBP8.96□□□□□ -0.98
VAMP3-201ENST00000054666 KIF4AO95239 1232 aa8.96□□□□□ -0.98
VAMP3-201ENST00000054666 ACTR2P61160 394 aa8.96□□□□□ -0.98
VAMP3-201ENST00000054666 TNNC1P63316 161 aa8.96□□□□□ -0.98
VAMP3-201ENST00000054666 STXBP2Q15833 593 aa8.96□□□□□ -0.98
VAMP3-201ENST00000054666 SNRNP35Q16560 246 aaKnown RBP8.96□□□□□ -0.98
VAMP3-201ENST00000054666 SWSAP1Q6NVH7 229 aa8.96□□□□□ -0.98
VAMP3-201ENST00000054666 PEX26Q7Z412 305 aa8.96□□□□□ -0.98
VAMP3-201ENST00000054666 GLYCTKQ8IVS8 523 aa8.96□□□□□ -0.98
VAMP3-201ENST00000054666 ANKRD35Q8N283 1001 aa8.96□□□□□ -0.98
VAMP3-201ENST00000054666 DNERQ8NFT8 737 aa8.96□□□□□ -0.98
VAMP3-201ENST00000054666 NLGN2Q8NFZ4 835 aa8.96□□□□□ -0.98
VAMP3-201ENST00000054666 TPCN2Q8NHX9 752 aa8.96□□□□□ -0.98
VAMP3-201ENST00000054666 LNX1Q8TBB1 728 aaPredicted RBP8.96□□□□□ -0.98
VAMP3-201ENST00000054666 FBXO41Q8TF61 875 aa8.96□□□□□ -0.98
VAMP3-201ENST00000054666 BICD1Q96G01 975 aa8.96□□□□□ -0.98
VAMP3-201ENST00000054666 PBKQ96KB5 322 aa8.96□□□□□ -0.98
VAMP3-201ENST00000054666 KIFC3Q9BVG8 833 aa8.96□□□□□ -0.98
VAMP3-201ENST00000054666 UBE2TQ9NPD8 197 aaPredicted RBP8.96□□□□□ -0.98
VAMP3-201ENST00000054666 MED4Q9NPJ6 270 aa8.96□□□□□ -0.98
VAMP3-201ENST00000054666 RBM12Q9NTZ6 932 aaKnown RBP8.96□□□□□ -0.98
VAMP3-201ENST00000054666 SMARCAL1Q9NZC9 954 aa8.96□□□□□ -0.98
VAMP3-201ENST00000054666 EHD2Q9NZN4 543 aa8.96□□□□□ -0.98
VAMP3-201ENST00000054666 FBXO40Q9UH90 709 aa8.96□□□□□ -0.98
VAMP3-201ENST00000054666 KCNG1Q9UIX4 513 aa8.96□□□□□ -0.98
VAMP3-201ENST00000054666 PACSIN2Q9UNF0 486 aaPredicted RBP8.96□□□□□ -0.98
VAMP3-201ENST00000054666 NCANO14594 1321 aa8.95□□□□□ -0.98
VAMP3-201ENST00000054666 PFASO15067 1338 aa8.95□□□□□ -0.98
VAMP3-201ENST00000054666 IGSF9BQ9UPX0 1349 aa8.95□□□□□ -0.98
VAMP3-201ENST00000054666 WDR81Q562E7 1941 aa8.95□□□□□ -0.98
VAMP3-201ENST00000054666 DICER1Q9UPY3 1922 aaKnown RBP8.95□□□□□ -0.98
VAMP3-201ENST00000054666 HNRNPDLO14979 420 aaKnown RBP8.95□□□□□ -0.98
VAMP3-201ENST00000054666 ZMYND10O75800 440 aa8.95□□□□□ -0.98
VAMP3-201ENST00000054666 TMEM253P0C7T8 217 aa8.95□□□□□ -0.98
VAMP3-201ENST00000054666 GALCP54803 685 aa8.95□□□□□ -0.98
VAMP3-201ENST00000054666 RTP1P59025 263 aa8.95□□□□□ -0.98
VAMP3-201ENST00000054666 DLG4P78352 724 aa8.95□□□□□ -0.98
VAMP3-201ENST00000054666 PPP3CAQ08209 521 aa8.95□□□□□ -0.98
VAMP3-201ENST00000054666 KIF22Q14807 665 aa8.95□□□□□ -0.98
VAMP3-201ENST00000054666 EPC2Q52LR7 807 aa8.95□□□□□ -0.98
VAMP3-201ENST00000054666 SH3D19Q5HYK7 790 aa8.95□□□□□ -0.98
VAMP3-201ENST00000054666 DAAM2Q86T65 1068 aa8.95□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms