RNA–Protein interactions for RNA: ENST00000005226.11

USH1C-201, Transcript of USH1 protein network component harmonin, humanhuman

APPRIS P3 TSL 5 BASIC

Gene USH1C, Length 2,700 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-201ENST00000005226 TBC1D10BQ4KMP7 808 aaPredicted RBP15.16■□□□□ 0.02
USH1C-201ENST00000005226 HIBCHQ6NVY1 386 aaPredicted RBP15.16■□□□□ 0.02
USH1C-201ENST00000005226 OTUD6AQ7L8S5 288 aa15.16■□□□□ 0.02
USH1C-201ENST00000005226 KIRREL3Q8IZU9 778 aa15.16■□□□□ 0.02
USH1C-201ENST00000005226 ATXN2LQ8WWM7 1075 aaKnown RBP15.16■□□□□ 0.02
USH1C-201ENST00000005226 KAT5Q92993 513 aa15.16■□□□□ 0.02
USH1C-201ENST00000005226 RBM17Q96I25 401 aaKnown RBP15.16■□□□□ 0.02
USH1C-201ENST00000005226 MLXIPLQ9NP71 852 aa15.16■□□□□ 0.02
USH1C-201ENST00000005226 NCANO14594 1321 aa15.16■□□□□ 0.02
USH1C-201ENST00000005226 SMCHD1A6NHR9 2005 aa15.16■□□□□ 0.02
USH1C-201ENST00000005226 COL24A1Q17RW2 1714 aa15.16■□□□□ 0.02
USH1C-201ENST00000005226 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP15.16■□□□□ 0.02
USH1C-201ENST00000005226 GOLGA6L10A0A0M3HER8 536 aa15.16■□□□□ 0.02
USH1C-201ENST00000005226 RGL2O15211 777 aa15.16■□□□□ 0.02
USH1C-201ENST00000005226 SLITRK3O94933 977 aa15.16■□□□□ 0.02
USH1C-201ENST00000005226 FTLP02792 175 aaPredicted RBP15.16■□□□□ 0.02
USH1C-201ENST00000005226 HLA-DOAP06340 250 aa15.16■□□□□ 0.02
USH1C-201ENST00000005226 CCDC172P0C7W6 258 aa15.16■□□□□ 0.02
USH1C-201ENST00000005226 MAPK7Q13164 816 aa15.16■□□□□ 0.02
USH1C-201ENST00000005226 Q4G0T1 1027 aa15.16■□□□□ 0.02
USH1C-201ENST00000005226 APOBEC3HQ6NTF7 200 aaKnown RBP15.16■□□□□ 0.02
USH1C-201ENST00000005226 TRMT1LQ7Z2T5 733 aaKnown RBP15.16■□□□□ 0.02
USH1C-201ENST00000005226 FBXO11Q86XK2 927 aa15.16■□□□□ 0.02
USH1C-201ENST00000005226 CCDC197Q8NCU1 140 aa15.16■□□□□ 0.02
USH1C-201ENST00000005226 ZSWIM2Q8NEG5 633 aa15.16■□□□□ 0.02
USH1C-201ENST00000005226 AMNQ9BXJ7 453 aa15.16■□□□□ 0.02
USH1C-201ENST00000005226 UBE2TQ9NPD8 197 aaPredicted RBP15.16■□□□□ 0.02
USH1C-201ENST00000005226 WRAP73Q9P2S5 460 aaPredicted RBP15.16■□□□□ 0.02
USH1C-201ENST00000005226 TTC7AQ9ULT0 858 aaPredicted RBP15.16■□□□□ 0.02
USH1C-201ENST00000005226 CD2APQ9Y5K6 639 aa15.16■□□□□ 0.02
USH1C-201ENST00000005226 F5H6K3 240 aa15.16■□□□□ 0.02
USH1C-201ENST00000005226 CREB1P16220 341 aa15.16■□□□□ 0.02
USH1C-201ENST00000005226 PREPLQ4J6C6 727 aaPredicted RBP15.16■□□□□ 0.02
USH1C-201ENST00000005226 ARHGEF19Q8IW93 802 aa15.16■□□□□ 0.02
USH1C-201ENST00000005226 CARD9Q9H257 536 aa15.16■□□□□ 0.02
USH1C-201ENST00000005226 BAIAP2L1Q9UHR4 511 aa15.16■□□□□ 0.02
USH1C-201ENST00000005226 JAG1P78504 1218 aa15.15■□□□□ 0.02
USH1C-201ENST00000005226 CERKLQ49MI3 558 aaPredicted RBP15.15■□□□□ 0.02
USH1C-201ENST00000005226 LACTB2Q53H82 288 aaPredicted RBP15.15■□□□□ 0.02
USH1C-201ENST00000005226 C1orf186Q6ZWK4 172 aa15.15■□□□□ 0.02
USH1C-201ENST00000005226 HOOK3Q86VS8 718 aa15.15■□□□□ 0.02
USH1C-201ENST00000005226 GIMAP7Q8NHV1 300 aa15.15■□□□□ 0.02
USH1C-201ENST00000005226 TCP11Q8WWU5 503 aa15.15■□□□□ 0.02
USH1C-201ENST00000005226 C8orf37Q96NL8 207 aa15.15■□□□□ 0.02
USH1C-201ENST00000005226 AGPAT1Q99943 283 aa15.15■□□□□ 0.02
USH1C-201ENST00000005226 INTS9Q9NV88 658 aaKnown RBP15.15■□□□□ 0.02
USH1C-201ENST00000005226 DNAJC17Q9NVM6 304 aaKnown RBP15.15■□□□□ 0.02
USH1C-201ENST00000005226 GTPBP10A4D1E9 387 aaKnown RBP15.15■□□□□ 0.02
USH1C-201ENST00000005226 HGSO14964 777 aaPredicted RBP15.15■□□□□ 0.02
USH1C-201ENST00000005226 PPIP5K2O43314 1243 aa15.15■□□□□ 0.02
USH1C-201ENST00000005226 PYGMP11217 842 aa15.15■□□□□ 0.02
USH1C-201ENST00000005226 EIF3BP55884 814 aaKnown RBP15.15■□□□□ 0.02
USH1C-201ENST00000005226 MYL7Q01449 175 aa15.15■□□□□ 0.02
USH1C-201ENST00000005226 CRY2Q49AN0 593 aa15.15■□□□□ 0.02
USH1C-201ENST00000005226 TBC1D1Q86TI0 1168 aaPredicted RBP15.15■□□□□ 0.02
USH1C-201ENST00000005226 C3orf20Q8ND61 904 aa15.15■□□□□ 0.02
USH1C-201ENST00000005226 SH2D3AQ9BRG2 576 aa15.15■□□□□ 0.02
USH1C-201ENST00000005226 WDR18Q9BV38 432 aa15.15■□□□□ 0.02
USH1C-201ENST00000005226 CNOT10Q9H9A5 744 aaKnown RBP15.15■□□□□ 0.02
USH1C-201ENST00000005226 A1CFQ9NQ94 594 aaKnown RBP15.15■□□□□ 0.02
USH1C-201ENST00000005226 AGPAT3Q9NRZ7 376 aa15.15■□□□□ 0.02
USH1C-201ENST00000005226 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP15.15■□□□□ 0.02
USH1C-201ENST00000005226 APEX2Q9UBZ4 518 aa15.15■□□□□ 0.02
USH1C-201ENST00000005226 MCM8Q9UJA3 840 aa15.15■□□□□ 0.02
USH1C-201ENST00000005226 ANKRD62A6NC57 917 aa15.14■□□□□ 0.01
USH1C-201ENST00000005226 EXOC3O60645 756 aa15.14■□□□□ 0.01
USH1C-201ENST00000005226 RPSAP08865 295 aaKnown RBP15.14■□□□□ 0.01
USH1C-201ENST00000005226 COMTP21964 271 aa15.14■□□□□ 0.01
USH1C-201ENST00000005226 SREBF1P36956 1147 aa15.14■□□□□ 0.01
USH1C-201ENST00000005226 MMP13P45452 471 aa15.14■□□□□ 0.01
USH1C-201ENST00000005226 ELF3P78545 371 aaPredicted RBP15.14■□□□□ 0.01
USH1C-201ENST00000005226 AP3B2Q13367 1082 aa15.14■□□□□ 0.01
USH1C-201ENST00000005226 ODR4Q5SWX8 454 aa15.14■□□□□ 0.01
USH1C-201ENST00000005226 FAM20AQ96MK3 541 aa15.14■□□□□ 0.01
USH1C-201ENST00000005226 FIZ1Q96SL8 496 aa15.14■□□□□ 0.01
USH1C-201ENST00000005226 HSD17B14Q9BPX1 270 aa15.14■□□□□ 0.01
USH1C-201ENST00000005226 LRRC4BQ9NT99 713 aa15.14■□□□□ 0.01
USH1C-201ENST00000005226 ODF2LQ9ULJ1 636 aa15.14■□□□□ 0.01
USH1C-201ENST00000005226 PPP1R12BO60237 982 aaPredicted RBP15.14■□□□□ 0.01
USH1C-201ENST00000005226 CFBP00751 764 aa15.14■□□□□ 0.01
USH1C-201ENST00000005226 CLTAP09496 248 aa15.14■□□□□ 0.01
USH1C-201ENST00000005226 ANXA13P27216 316 aa15.14■□□□□ 0.01
USH1C-201ENST00000005226 MSL1Q68DK7 614 aa15.14■□□□□ 0.01
USH1C-201ENST00000005226 CCDC137Q6PK04 289 aaKnown RBP15.14■□□□□ 0.01
USH1C-201ENST00000005226 ZNF720Q7Z2F6 126 aa15.14■□□□□ 0.01
USH1C-201ENST00000005226 PNMA8AQ86V59 439 aaPredicted RBP15.14■□□□□ 0.01
USH1C-201ENST00000005226 FAM178BQ8IXR5 827 aa15.14■□□□□ 0.01
USH1C-201ENST00000005226 RPUSD2Q8IZ73 545 aaKnown RBP15.14■□□□□ 0.01
USH1C-201ENST00000005226 N4BP2L2Q92802 583 aaPredicted RBP15.14■□□□□ 0.01
USH1C-201ENST00000005226 PCDHB18PQ96TA0 734 aa15.14■□□□□ 0.01
USH1C-201ENST00000005226 DDX23Q9BUQ8 820 aaKnown RBP15.14■□□□□ 0.01
USH1C-201ENST00000005226 KDM4CQ9H3R0 1056 aa15.14■□□□□ 0.01
USH1C-201ENST00000005226 PARVGQ9HBI0 331 aa15.14■□□□□ 0.01
USH1C-201ENST00000005226 ABCF3Q9NUQ8 709 aa15.14■□□□□ 0.01
USH1C-201ENST00000005226 PKD2L1Q9P0L9 805 aa15.14■□□□□ 0.01
USH1C-201ENST00000005226 FRMD4BQ9Y2L6 1034 aa15.14■□□□□ 0.01
USH1C-201ENST00000005226 BBOX1O75936 387 aa15.13■□□□□ 0.01
USH1C-201ENST00000005226 NDUFB10O96000 172 aa15.13■□□□□ 0.01
USH1C-201ENST00000005226 NUDT17P0C025 328 aa15.13■□□□□ 0.01
USH1C-201ENST00000005226 GCLMP48507 274 aa15.13■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms