RNA–Protein interactions for RNA: ENSMUST00000213874.1

Usp28-203, Transcript of Ubiquitin carboxyl-terminal hydrolase 28, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Usp28, Length 4,109 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Usp28-203ENSMUST00000213874 Bub1bQ9Z1S0 1052 aa10.04□□□□□ -0.8
Usp28-203ENSMUST00000213874 Ggt5Q9Z2A9 573 aa10.04□□□□□ -0.8
Usp28-203ENSMUST00000213874 Znf638Q61464 1960 aaKnown RBP10.04□□□□□ -0.8
Usp28-203ENSMUST00000213874 Cdca2Q14B71 982 aaKnown RBP10.04□□□□□ -0.8
Usp28-203ENSMUST00000213874 Usp17leQ7M764 540 aa10.04□□□□□ -0.8
Usp28-203ENSMUST00000213874 Fbxo10Q7TQF2 950 aa10.04□□□□□ -0.8
Usp28-203ENSMUST00000213874 Ints2Q80UK8 1198 aa10.04□□□□□ -0.8
Usp28-203ENSMUST00000213874 Lin9Q8C735 542 aa10.04□□□□□ -0.8
Usp28-203ENSMUST00000213874 Tmem221Q8K071 230 aa10.04□□□□□ -0.8
Usp28-203ENSMUST00000213874 Senp2Q91ZX6 588 aa10.04□□□□□ -0.8
Usp28-203ENSMUST00000213874 Aipl1Q924K1 328 aa10.04□□□□□ -0.8
Usp28-203ENSMUST00000213874 Txnrd3Q99MD6 652 aa10.04□□□□□ -0.8
Usp28-203ENSMUST00000213874 Ubxn6Q99PL6 442 aa10.04□□□□□ -0.8
Usp28-203ENSMUST00000213874 Usp29Q9ES63 869 aa10.04□□□□□ -0.8
Usp28-203ENSMUST00000213874 Hebp1Q9R257 190 aa10.04□□□□□ -0.8
Usp28-203ENSMUST00000213874 Myh10Q61879 1976 aaKnown RBP10.04□□□□□ -0.8
Usp28-203ENSMUST00000213874 Prdm2A2A7B5 1709 aaKnown RBP10.04□□□□□ -0.8
Usp28-203ENSMUST00000213874 Snapc4Q8BP86 1333 aa10.04□□□□□ -0.8
Usp28-203ENSMUST00000213874 Znf804aA2AKY4 1200 aa10.04□□□□□ -0.8
Usp28-203ENSMUST00000213874 Mdm4O35618 489 aa10.04□□□□□ -0.8
Usp28-203ENSMUST00000213874 Gsta4P24472 222 aa10.04□□□□□ -0.8
Usp28-203ENSMUST00000213874 Nsun7Q14AW5 724 aa10.04□□□□□ -0.8
Usp28-203ENSMUST00000213874 Fbxo28Q8BIG4 368 aa10.04□□□□□ -0.8
Usp28-203ENSMUST00000213874 Ythdf3Q8BYK6 585 aaKnown RBP10.04□□□□□ -0.8
Usp28-203ENSMUST00000213874 CpzQ8R4V4 654 aa10.04□□□□□ -0.8
Usp28-203ENSMUST00000213874 Pagr1aQ99L02 253 aa10.04□□□□□ -0.8
Usp28-203ENSMUST00000213874 Cuedc2Q9CXX9 284 aa10.04□□□□□ -0.8
Usp28-203ENSMUST00000213874 IydQ9DCX8 285 aa10.04□□□□□ -0.8
Usp28-203ENSMUST00000213874 IdeQ9JHR7 1019 aa10.04□□□□□ -0.8
Usp28-203ENSMUST00000213874 Apol10bG3X9K7 334 aa10.03□□□□□ -0.8
Usp28-203ENSMUST00000213874 Ift81O35594 676 aa10.03□□□□□ -0.8
Usp28-203ENSMUST00000213874 Marcksl1P28667 200 aa10.03□□□□□ -0.8
Usp28-203ENSMUST00000213874 Rpl13P47963 211 aaKnown RBP10.03□□□□□ -0.8
Usp28-203ENSMUST00000213874 Rbm46P86049 533 aa10.03□□□□□ -0.8
Usp28-203ENSMUST00000213874 Sec23ipQ6NZC7 998 aa10.03□□□□□ -0.8
Usp28-203ENSMUST00000213874 Tmem132dQ76HP3 1097 aa10.03□□□□□ -0.8
Usp28-203ENSMUST00000213874 Man2a2Q8BRK9 1152 aa10.03□□□□□ -0.8
Usp28-203ENSMUST00000213874 Ttll1Q91V51 423 aa10.03□□□□□ -0.8
Usp28-203ENSMUST00000213874 Mtmr4Q91XS1 1190 aa10.03□□□□□ -0.8
Usp28-203ENSMUST00000213874 MmadhcQ99LS1 296 aa10.03□□□□□ -0.8
Usp28-203ENSMUST00000213874 NesQ6P5H2 1864 aaKnown RBP10.03□□□□□ -0.8
Usp28-203ENSMUST00000213874 Adamtsl3G3UXC7 1706 aa10.03□□□□□ -0.8
Usp28-203ENSMUST00000213874 DgkhD3YXJ0 1156 aa10.03□□□□□ -0.8
Usp28-203ENSMUST00000213874 Tada2bD3Z4Z0 420 aaKnown RBP10.03□□□□□ -0.8
Usp28-203ENSMUST00000213874 Epha3P29319 983 aa10.03□□□□□ -0.8
Usp28-203ENSMUST00000213874 Flt3Q00342 1000 aa10.03□□□□□ -0.8
Usp28-203ENSMUST00000213874 Spata18Q0P557 537 aa10.03□□□□□ -0.8
Usp28-203ENSMUST00000213874 Klra6Q60653 266 aa10.03□□□□□ -0.8
Usp28-203ENSMUST00000213874 Ccdc189Q6NZQ0 333 aa10.03□□□□□ -0.8
Usp28-203ENSMUST00000213874 Wnk4Q80UE6 1222 aa10.03□□□□□ -0.8
Usp28-203ENSMUST00000213874 TufmQ8BFR5 452 aa10.03□□□□□ -0.8
Usp28-203ENSMUST00000213874 Usp20Q8C6M1 916 aa10.03□□□□□ -0.8
Usp28-203ENSMUST00000213874 Slc18a1Q8R090 521 aa10.03□□□□□ -0.8
Usp28-203ENSMUST00000213874 Bud13Q8R149 637 aa10.03□□□□□ -0.8
Usp28-203ENSMUST00000213874 NptxrQ99J85 493 aa10.03□□□□□ -0.8
Usp28-203ENSMUST00000213874 Uchl3Q9JKB1 230 aa10.03□□□□□ -0.8
Usp28-203ENSMUST00000213874 Nudt5Q9JKX6 218 aa10.03□□□□□ -0.8
Usp28-203ENSMUST00000213874 Eif2ak1Q9Z2R9 619 aa10.03□□□□□ -0.8
Usp28-203ENSMUST00000213874 Ddx60E9PZQ1 1711 aa10.03□□□□□ -0.8
Usp28-203ENSMUST00000213874 Pcdh11xF6ZNL5 1338 aa10.03□□□□□ -0.8
Usp28-203ENSMUST00000213874 Slc27a2O35488 620 aa10.03□□□□□ -0.8
Usp28-203ENSMUST00000213874 Got1P05201 413 aa10.03□□□□□ -0.8
Usp28-203ENSMUST00000213874 Krt8P11679 490 aaKnown RBP10.03□□□□□ -0.8
Usp28-203ENSMUST00000213874 Ccdc110Q3V125 848 aa10.03□□□□□ -0.8
Usp28-203ENSMUST00000213874 Luc7l3Q5SUF2 432 aaKnown RBP10.03□□□□□ -0.8
Usp28-203ENSMUST00000213874 Dlg4Q62108 724 aa10.03□□□□□ -0.8
Usp28-203ENSMUST00000213874 Q6PD19 689 aa10.03□□□□□ -0.8
Usp28-203ENSMUST00000213874 Vps52Q8C754 723 aaKnown RBP10.03□□□□□ -0.8
Usp28-203ENSMUST00000213874 Abcf3Q8K268 709 aa10.03□□□□□ -0.8
Usp28-203ENSMUST00000213874 Plekhh3Q8VCE9 796 aa10.03□□□□□ -0.8
Usp28-203ENSMUST00000213874 Ces1fQ91WU0 561 aa10.03□□□□□ -0.8
Usp28-203ENSMUST00000213874 Tmem192Q9CXT7 266 aa10.03□□□□□ -0.8
Usp28-203ENSMUST00000213874 1700109H08RikQ9D9C0 210 aa10.03□□□□□ -0.8
Usp28-203ENSMUST00000213874 Rtn3Q9ES97 964 aa10.03□□□□□ -0.8
Usp28-203ENSMUST00000213874 Krt17Q9QWL7 433 aa10.03□□□□□ -0.8
Usp28-203ENSMUST00000213874 Sept3Q9Z1S5 350 aa10.03□□□□□ -0.8
Usp28-203ENSMUST00000213874 Tns2Q8CGB6 1400 aa10.03□□□□□ -0.8
Usp28-203ENSMUST00000213874 EvplQ9D952 2035 aa10.02□□□□□ -0.8
Usp28-203ENSMUST00000213874 Dynlt1P51807 113 aa10.02□□□□□ -0.8
Usp28-203ENSMUST00000213874 Slc10a4Q3UEZ8 437 aa10.02□□□□□ -0.8
Usp28-203ENSMUST00000213874 Fbxo11Q7TPD1 930 aaKnown RBP10.02□□□□□ -0.8
Usp28-203ENSMUST00000213874 PhkbQ7TSH2 1085 aa10.02□□□□□ -0.8
Usp28-203ENSMUST00000213874 Sfr1Q8BP27 319 aa10.02□□□□□ -0.8
Usp28-203ENSMUST00000213874 Slc26a6Q8CIW6 758 aa10.02□□□□□ -0.8
Usp28-203ENSMUST00000213874 Lpgat1Q91YX5 370 aa10.02□□□□□ -0.8
Usp28-203ENSMUST00000213874 Srfbp1Q9CZ91 441 aaKnown RBP10.02□□□□□ -0.8
Usp28-203ENSMUST00000213874 Ddx24Q9ESV0 857 aaKnown RBP10.02□□□□□ -0.8
Usp28-203ENSMUST00000213874 Sipa1l2Q80TE4 1722 aa10.02□□□□□ -0.81
Usp28-203ENSMUST00000213874 Osbpl9A2A8Z1 736 aa10.02□□□□□ -0.81
Usp28-203ENSMUST00000213874 Gm4297D3YWB7 211 aa10.02□□□□□ -0.81
Usp28-203ENSMUST00000213874 Gm4758L7N258 96 aa10.02□□□□□ -0.81
Usp28-203ENSMUST00000213874 Aco1P28271 889 aaKnown RBP10.02□□□□□ -0.81
Usp28-203ENSMUST00000213874 DesP31001 469 aaKnown RBP10.02□□□□□ -0.81
Usp28-203ENSMUST00000213874 Smarcad1Q04692 1021 aa10.02□□□□□ -0.81
Usp28-203ENSMUST00000213874 Hipk4Q3V016 616 aa10.02□□□□□ -0.81
Usp28-203ENSMUST00000213874 Mtus1Q5HZI1 1210 aa10.02□□□□□ -0.81
Usp28-203ENSMUST00000213874 Dph1Q5NCQ5 438 aa10.02□□□□□ -0.81
Usp28-203ENSMUST00000213874 Cacna2d2Q6PHS9 1154 aa10.02□□□□□ -0.81
Usp28-203ENSMUST00000213874 Mindy1Q76LS9 468 aa10.02□□□□□ -0.81
Usp28-203ENSMUST00000213874 Slc7a6osQ7TPE5 306 aa10.02□□□□□ -0.81
Retrieved 100 of 22,080 RNA–protein pairs in 19.5 ms