RNA–Protein interactions for RNA: ENSMUST00000172711.1

Trim40-203, Transcript of Tripartite motif-containing protein 40, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Trim40, Length 1,539 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim40-203ENSMUST00000172711 Satb1Q60611 764 aa9.03□□□□□ -0.96
Trim40-203ENSMUST00000172711 ItgaeQ60677 1167 aa9.03□□□□□ -0.96
Trim40-203ENSMUST00000172711 Slc9a1Q61165 820 aa9.03□□□□□ -0.96
Trim40-203ENSMUST00000172711 LbpQ61805 481 aa9.03□□□□□ -0.96
Trim40-203ENSMUST00000172711 Slc41a1Q8BJA2 512 aa9.03□□□□□ -0.96
Trim40-203ENSMUST00000172711 Amz1Q8BVF9 502 aa9.03□□□□□ -0.96
Trim40-203ENSMUST00000172711 Rsl1d1Q8BVY0 452 aaKnown RBP9.03□□□□□ -0.96
Trim40-203ENSMUST00000172711 Pnma1Q8C1C8 353 aa9.03□□□□□ -0.96
Trim40-203ENSMUST00000172711 Abi1Q8CBW3 481 aa9.03□□□□□ -0.96
Trim40-203ENSMUST00000172711 Lonp1Q8CGK3 949 aaKnown RBP9.03□□□□□ -0.96
Trim40-203ENSMUST00000172711 Pak2Q8CIN4 524 aa9.03□□□□□ -0.96
Trim40-203ENSMUST00000172711 Mrgprx1Q8CIP3 322 aa9.03□□□□□ -0.96
Trim40-203ENSMUST00000172711 Nat10Q8K224 1024 aaKnown RBP9.03□□□□□ -0.96
Trim40-203ENSMUST00000172711 OtoaQ8K561 1137 aa9.03□□□□□ -0.96
Trim40-203ENSMUST00000172711 Tmem30aQ8VEK0 364 aa9.03□□□□□ -0.96
Trim40-203ENSMUST00000172711 Pcdhb12Q91Y07 789 aa9.03□□□□□ -0.96
Trim40-203ENSMUST00000172711 Slx4ipQ9D7Y9 413 aa9.03□□□□□ -0.96
Trim40-203ENSMUST00000172711 Zfyve19Q9DAZ9 389 aa9.03□□□□□ -0.96
Trim40-203ENSMUST00000172711 IydQ9DCX8 285 aa9.03□□□□□ -0.96
Trim40-203ENSMUST00000172711 Rab27aQ9ERI2 221 aa9.03□□□□□ -0.96
Trim40-203ENSMUST00000172711 PigoQ9JJI6 1093 aa9.03□□□□□ -0.96
Trim40-203ENSMUST00000172711 Egfl7Q9QXT5 275 aa9.03□□□□□ -0.96
Trim40-203ENSMUST00000172711 Bscl2Q9Z2E9 383 aa9.03□□□□□ -0.96
Trim40-203ENSMUST00000172711 Svs3aF2Z472 265 aa9.02□□□□□ -0.97
Trim40-203ENSMUST00000172711 Bcat1P24288 386 aa9.02□□□□□ -0.97
Trim40-203ENSMUST00000172711 Wnt7aP24383 349 aa9.02□□□□□ -0.97
Trim40-203ENSMUST00000172711 Mpzl3Q3V3F6 237 aa9.02□□□□□ -0.97
Trim40-203ENSMUST00000172711 G2e3Q5RJY2 716 aa9.02□□□□□ -0.97
Trim40-203ENSMUST00000172711 Slc27a1Q60714 646 aa9.02□□□□□ -0.97
Trim40-203ENSMUST00000172711 Tgoln2Q62314 363 aa9.02□□□□□ -0.97
Trim40-203ENSMUST00000172711 Zbtb5Q7TQG0 670 aa9.02□□□□□ -0.97
Trim40-203ENSMUST00000172711 Zscan4cQ80VJ6 506 aa9.02□□□□□ -0.97
Trim40-203ENSMUST00000172711 Bbs9Q811G0 885 aa9.02□□□□□ -0.97
Trim40-203ENSMUST00000172711 Q8BHR8 331 aa9.02□□□□□ -0.97
Trim40-203ENSMUST00000172711 Rd3Q8BRE0 195 aa9.02□□□□□ -0.97
Trim40-203ENSMUST00000172711 Fbxl5Q8C2S5 690 aa9.02□□□□□ -0.97
Trim40-203ENSMUST00000172711 Inpp5fQ8CDA1 1132 aa9.02□□□□□ -0.97
Trim40-203ENSMUST00000172711 Mamdc2Q8CG85 686 aa9.02□□□□□ -0.97
Trim40-203ENSMUST00000172711 Eif2b5Q8CHW4 717 aa9.02□□□□□ -0.97
Trim40-203ENSMUST00000172711 Acvr1cQ8K348 493 aa9.02□□□□□ -0.97
Trim40-203ENSMUST00000172711 Unc93b1Q8VCW4 598 aa9.02□□□□□ -0.97
Trim40-203ENSMUST00000172711 Ccdc71Q8VEG0 433 aa9.02□□□□□ -0.97
Trim40-203ENSMUST00000172711 Fuca1Q99LJ1 452 aa9.02□□□□□ -0.97
Trim40-203ENSMUST00000172711 BrapQ99MP8 591 aa9.02□□□□□ -0.97
Trim40-203ENSMUST00000172711 AacsQ9D2R0 672 aa9.02□□□□□ -0.97
Trim40-203ENSMUST00000172711 Ascl3Q9JJR7 174 aa9.02□□□□□ -0.97
Trim40-203ENSMUST00000172711 Tnfsf13bQ9WU72 309 aa9.02□□□□□ -0.97
Trim40-203ENSMUST00000172711 Cd97Q9Z0M6 818 aa9.02□□□□□ -0.97
Trim40-203ENSMUST00000172711 Sucla2Q9Z2I9 463 aa9.02□□□□□ -0.97
Trim40-203ENSMUST00000172711 Psma5Q9Z2U1 241 aaKnown RBP9.02□□□□□ -0.97
Trim40-203ENSMUST00000172711 Gprin2D3Z1D7 455 aa9.01□□□□□ -0.97
Trim40-203ENSMUST00000172711 Lmod3E9QA62 571 aa9.01□□□□□ -0.97
Trim40-203ENSMUST00000172711 Cyp3a25O09158 503 aa9.01□□□□□ -0.97
Trim40-203ENSMUST00000172711 Psmc3O88685 442 aa9.01□□□□□ -0.97
Trim40-203ENSMUST00000172711 Hoxb3P09026 433 aa9.01□□□□□ -0.97
Trim40-203ENSMUST00000172711 ArvcfP98203 962 aa9.01□□□□□ -0.97
Trim40-203ENSMUST00000172711 GaltQ03249 379 aa9.01□□□□□ -0.97
Trim40-203ENSMUST00000172711 Kcnma1Q08460 1209 aa9.01□□□□□ -0.97
Trim40-203ENSMUST00000172711 Oog4Q4G0C7 502 aa9.01□□□□□ -0.97
Trim40-203ENSMUST00000172711 Trak2Q6P9N8 913 aa9.01□□□□□ -0.97
Trim40-203ENSMUST00000172711 Acot5Q6Q2Z6 421 aa9.01□□□□□ -0.97
Trim40-203ENSMUST00000172711 Igsf3Q6ZQA6 1194 aa9.01□□□□□ -0.97
Trim40-203ENSMUST00000172711 Ppip5k2Q6ZQB6 1129 aa9.01□□□□□ -0.97
Trim40-203ENSMUST00000172711 Ipo8Q7TMY7 1010 aa9.01□□□□□ -0.97
Trim40-203ENSMUST00000172711 Ccdc172Q810N9 267 aa9.01□□□□□ -0.97
Trim40-203ENSMUST00000172711 Vps52Q8C754 723 aaKnown RBP9.01□□□□□ -0.97
Trim40-203ENSMUST00000172711 Asb2Q8K0L0 634 aa9.01□□□□□ -0.97
Trim40-203ENSMUST00000172711 Smc1aQ9CU62 1233 aaKnown RBP9.01□□□□□ -0.97
Trim40-203ENSMUST00000172711 Tmem206Q9D771 350 aa9.01□□□□□ -0.97
Trim40-203ENSMUST00000172711 Chmp5Q9D7S9 219 aa9.01□□□□□ -0.97
Trim40-203ENSMUST00000172711 Akr1a1Q9JII6 325 aa9.01□□□□□ -0.97
Trim40-203ENSMUST00000172711 Vmn2r17E9PYF5 849 aa9□□□□□ -0.97
Trim40-203ENSMUST00000172711 Rab11fip2G3XA57 512 aa9□□□□□ -0.97
Trim40-203ENSMUST00000172711 Wisp1O54775 367 aa9□□□□□ -0.97
Trim40-203ENSMUST00000172711 Axin2O88566 840 aa9□□□□□ -0.97
Trim40-203ENSMUST00000172711 EgfP01132 1217 aa9□□□□□ -0.97
Trim40-203ENSMUST00000172711 Xrcc6P23475 608 aa9□□□□□ -0.97
Trim40-203ENSMUST00000172711 Psmc5P62196 406 aa9□□□□□ -0.97
Trim40-203ENSMUST00000172711 Kmt5aQ2YDW7 349 aa9□□□□□ -0.97
Trim40-203ENSMUST00000172711 Stk11ipQ3TAA7 1072 aa9□□□□□ -0.97
Trim40-203ENSMUST00000172711 Gtf2f1Q3THK3 508 aaKnown RBP9□□□□□ -0.97
Trim40-203ENSMUST00000172711 Bahd1Q497V6 772 aa9□□□□□ -0.97
Trim40-203ENSMUST00000172711 Nlrp2Q4PLS0 1046 aaKnown RBP9□□□□□ -0.97
Trim40-203ENSMUST00000172711 Cyp2c66Q5GLZ0 490 aa9□□□□□ -0.97
Trim40-203ENSMUST00000172711 Tsr1Q5SWD9 803 aa9□□□□□ -0.97
Trim40-203ENSMUST00000172711 Ppp2r5cQ60996 524 aa9□□□□□ -0.97
Trim40-203ENSMUST00000172711 Serpinb3dQ6UKZ0 387 aa9□□□□□ -0.97
Trim40-203ENSMUST00000172711 Lrfn3Q8BLY3 626 aa9□□□□□ -0.97
Trim40-203ENSMUST00000172711 Shc2Q8BMC3 573 aa9□□□□□ -0.97
Trim40-203ENSMUST00000172711 Rspry1Q8BVR6 576 aa9□□□□□ -0.97
Trim40-203ENSMUST00000172711 Plekhs1Q8BW88 474 aa9□□□□□ -0.97
Trim40-203ENSMUST00000172711 Prpf31Q8CCF0 499 aaKnown RBP9□□□□□ -0.97
Trim40-203ENSMUST00000172711 Znf467Q8JZL0 594 aa9□□□□□ -0.97
Trim40-203ENSMUST00000172711 Tdrd7Q8K1H1 1086 aaKnown RBP9□□□□□ -0.97
Trim40-203ENSMUST00000172711 Stxbp5Q8K400 1152 aaKnown RBP9□□□□□ -0.97
Trim40-203ENSMUST00000172711 SdsQ8VBT2 327 aa9□□□□□ -0.97
Trim40-203ENSMUST00000172711 Bbox1Q924Y0 387 aa9□□□□□ -0.97
Trim40-203ENSMUST00000172711 Atoh8Q99NA2 322 aa9□□□□□ -0.97
Trim40-203ENSMUST00000172711 Krtap5-3Q9D226 196 aa9□□□□□ -0.97
Trim40-203ENSMUST00000172711 Col4a3bpQ9EQG9 624 aa9□□□□□ -0.97
Retrieved 100 of 22,080 RNA–protein pairs in 27.4 ms