RNA–Protein interactions for RNA: ENSMUST00000160369.7

Ercc1-203, Transcript of DNA excision repair protein ERCC-1, mousemouse

TSL 1 (best) BASIC

Gene Ercc1, Length 1,175 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ercc1-203ENSMUST00000160369 Hook1Q8BIL5 728 aa15.2■□□□□ 0.02
Ercc1-203ENSMUST00000160369 Igdcc3Q8BQC3 813 aa15.2■□□□□ 0.02
Ercc1-203ENSMUST00000160369 Serpina3bQ8BYY9 420 aa15.2■□□□□ 0.02
Ercc1-203ENSMUST00000160369 Naa30Q8CES0 364 aa15.2■□□□□ 0.02
Ercc1-203ENSMUST00000160369 Pde5aQ8CG03 865 aa15.2■□□□□ 0.02
Ercc1-203ENSMUST00000160369 Tdrd7Q8K1H1 1086 aaKnown RBP15.2■□□□□ 0.02
Ercc1-203ENSMUST00000160369 Unc93b1Q8VCW4 598 aa15.2■□□□□ 0.02
Ercc1-203ENSMUST00000160369 Psmd2Q8VDM4 908 aa15.2■□□□□ 0.02
Ercc1-203ENSMUST00000160369 TraipQ8VIG6 470 aa15.2■□□□□ 0.02
Ercc1-203ENSMUST00000160369 Med15Q924H2 789 aa15.2■□□□□ 0.02
Ercc1-203ENSMUST00000160369 Dhx30Q99PU8 1217 aaKnown RBP15.2■□□□□ 0.02
Ercc1-203ENSMUST00000160369 Glipr1l2Q9CQ35 332 aa15.2■□□□□ 0.02
Ercc1-203ENSMUST00000160369 Micu3Q9CTY5 523 aa15.2■□□□□ 0.02
Ercc1-203ENSMUST00000160369 Smyd3Q9CWR2 428 aa15.2■□□□□ 0.02
Ercc1-203ENSMUST00000160369 Tube1Q9D6T1 475 aa15.2■□□□□ 0.02
Ercc1-203ENSMUST00000160369 2310002L09RikQ9D7L5 217 aa15.2■□□□□ 0.02
Ercc1-203ENSMUST00000160369 Tlr6Q9EPW9 795 aa15.2■□□□□ 0.02
Ercc1-203ENSMUST00000160369 Tbx18Q9EPZ6 613 aa15.2■□□□□ 0.02
Ercc1-203ENSMUST00000160369 Sh3bgrQ9WUZ7 214 aa15.2■□□□□ 0.02
Ercc1-203ENSMUST00000160369 Ppp2r3dQ9Z176 491 aa15.2■□□□□ 0.02
Ercc1-203ENSMUST00000160369 Gys1Q9Z1E4 738 aaKnown RBP15.2■□□□□ 0.02
Ercc1-203ENSMUST00000160369 Arih2Q9Z1K6 492 aa15.2■□□□□ 0.02
Ercc1-203ENSMUST00000160369 Ralgapa2A3KGS3 1872 aa15.2■□□□□ 0.02
Ercc1-203ENSMUST00000160369 1110002E22RikE0CYV9 1786 aa15.19■□□□□ 0.02
Ercc1-203ENSMUST00000160369 Myo5aQ99104 1853 aaKnown RBP15.19■□□□□ 0.02
Ercc1-203ENSMUST00000160369 Klhl34A2AI76 644 aa15.19■□□□□ 0.02
Ercc1-203ENSMUST00000160369 Kng1O08677 661 aa15.19■□□□□ 0.02
Ercc1-203ENSMUST00000160369 Wdr5P61965 334 aa15.19■□□□□ 0.02
Ercc1-203ENSMUST00000160369 Ssrp1Q08943 708 aaKnown RBP15.19■□□□□ 0.02
Ercc1-203ENSMUST00000160369 Nlrp4cQ3TKR3 982 aa15.19■□□□□ 0.02
Ercc1-203ENSMUST00000160369 Tgfbrap1Q3UR70 860 aa15.19■□□□□ 0.02
Ercc1-203ENSMUST00000160369 Uimc1Q5U5Q9 727 aa15.19■□□□□ 0.02
Ercc1-203ENSMUST00000160369 Fkbp3Q62446 224 aaKnown RBP15.19■□□□□ 0.02
Ercc1-203ENSMUST00000160369 IgflQ6B9Z0 140 aa15.19■□□□□ 0.02
Ercc1-203ENSMUST00000160369 PoliQ6R3M4 717 aa15.19■□□□□ 0.02
Ercc1-203ENSMUST00000160369 Cd300aQ6SJQ0 318 aa15.19■□□□□ 0.02
Ercc1-203ENSMUST00000160369 Suz12Q80U70 741 aaKnown RBP15.19■□□□□ 0.02
Ercc1-203ENSMUST00000160369 Gprc5aQ8BHL4 356 aa15.19■□□□□ 0.02
Ercc1-203ENSMUST00000160369 Spata32Q8C5V0 334 aa15.19■□□□□ 0.02
Ercc1-203ENSMUST00000160369 Glis1Q8K1M4 789 aa15.19■□□□□ 0.02
Ercc1-203ENSMUST00000160369 Ushbp1Q8R370 680 aa15.19■□□□□ 0.02
Ercc1-203ENSMUST00000160369 Zcchc14Q8VIG0 956 aa15.19■□□□□ 0.02
Ercc1-203ENSMUST00000160369 Zfp64Q99KE8 643 aa15.19■□□□□ 0.02
Ercc1-203ENSMUST00000160369 Slc15a2Q9ES07 729 aa15.19■□□□□ 0.02
Ercc1-203ENSMUST00000160369 Wfdc1Q9ESH5 211 aa15.19■□□□□ 0.02
Ercc1-203ENSMUST00000160369 B4galt4Q9JJ04 344 aa15.19■□□□□ 0.02
Ercc1-203ENSMUST00000160369 Dnajb7Q9QYI8 312 aa15.19■□□□□ 0.02
Ercc1-203ENSMUST00000160369 Atp8b5A3FIN4 1183 aa15.18■□□□□ 0.02
Ercc1-203ENSMUST00000160369 Mmrn2A6H6E2 943 aa15.18■□□□□ 0.02
Ercc1-203ENSMUST00000160369 Trim30bE9PVL6 203 aa15.18■□□□□ 0.02
Ercc1-203ENSMUST00000160369 Ptpn22P29352 802 aa15.18■□□□□ 0.02
Ercc1-203ENSMUST00000160369 Ccnd2P30280 289 aa15.18■□□□□ 0.02
Ercc1-203ENSMUST00000160369 Gtf2bP62915 316 aa15.18■□□□□ 0.02
Ercc1-203ENSMUST00000160369 Ric8aQ3TIR3 530 aa15.18■□□□□ 0.02
Ercc1-203ENSMUST00000160369 Oog4Q4G0C7 502 aa15.18■□□□□ 0.02
Ercc1-203ENSMUST00000160369 Kiaa1841Q68FF0 718 aa15.18■□□□□ 0.02
Ercc1-203ENSMUST00000160369 Caps2Q8BUG5 550 aa15.18■□□□□ 0.02
Ercc1-203ENSMUST00000160369 Ttc39bQ8BYY4 617 aa15.18■□□□□ 0.02
Ercc1-203ENSMUST00000160369 Mis18aQ9CZJ6 204 aa15.18■□□□□ 0.02
Ercc1-203ENSMUST00000160369 Vmn1r65Q9EPS7 332 aa15.18■□□□□ 0.02
Ercc1-203ENSMUST00000160369 Tacc2Q9JJG0 1149 aa15.18■□□□□ 0.02
Ercc1-203ENSMUST00000160369 Lcmt1A0A0U1RNF2 332 aa15.17■□□□□ 0.02
Ercc1-203ENSMUST00000160369 Fpr-rs4A4FUQ5 323 aa15.17■□□□□ 0.02
Ercc1-203ENSMUST00000160369 Vmn2r17E9PYF5 849 aa15.17■□□□□ 0.02
Ercc1-203ENSMUST00000160369 Gm3739L7N296 216 aa15.17■□□□□ 0.02
Ercc1-203ENSMUST00000160369 Mdm4O35618 489 aa15.17■□□□□ 0.02
Ercc1-203ENSMUST00000160369 Nmt1O70310 496 aaKnown RBP15.17■□□□□ 0.02
Ercc1-203ENSMUST00000160369 SarsP26638 512 aaKnown RBP15.17■□□□□ 0.02
Ercc1-203ENSMUST00000160369 Nol4P60954 483 aa15.17■□□□□ 0.02
Ercc1-203ENSMUST00000160369 Arf4P61750 180 aa15.17■□□□□ 0.02
Ercc1-203ENSMUST00000160369 Kcnb1Q03717 857 aa15.17■□□□□ 0.02
Ercc1-203ENSMUST00000160369 Hexim2Q3TVI4 313 aa15.17■□□□□ 0.02
Ercc1-203ENSMUST00000160369 1700123L14RikQ3V2K7 440 aa15.17■□□□□ 0.02
Ercc1-203ENSMUST00000160369 Gas6Q61592 674 aa15.17■□□□□ 0.02
Ercc1-203ENSMUST00000160369 Cep135Q6P5D4 1140 aa15.17■□□□□ 0.02
Ercc1-203ENSMUST00000160369 Slc2a12Q8BFW9 622 aa15.17■□□□□ 0.02
Ercc1-203ENSMUST00000160369 Npas4Q8BGD7 802 aa15.17■□□□□ 0.02
Ercc1-203ENSMUST00000160369 Ildr1Q8CBR1 537 aa15.17■□□□□ 0.02
Ercc1-203ENSMUST00000160369 Slc14a1Q8VHL0 384 aa15.17■□□□□ 0.02
Ercc1-203ENSMUST00000160369 Git2Q9JLQ2 708 aa15.17■□□□□ 0.02
Ercc1-203ENSMUST00000160369 CluhQ5SW19 1315 aa15.17■□□□□ 0.02
Ercc1-203ENSMUST00000160369 1700017N19RikA0A087WPJ1 469 aa15.16■□□□□ 0.02
Ercc1-203ENSMUST00000160369 Vmn2r79E9Q067 851 aa15.16■□□□□ 0.02
Ercc1-203ENSMUST00000160369 Kdelc2G5E897 503 aa15.16■□□□□ 0.02
Ercc1-203ENSMUST00000160369 Ap1b1O35643 943 aaKnown RBP15.16■□□□□ 0.02
Ercc1-203ENSMUST00000160369 Pbx2O35984 430 aa15.16■□□□□ 0.02
Ercc1-203ENSMUST00000160369 Eif3dO70194 548 aaKnown RBP15.16■□□□□ 0.02
Ercc1-203ENSMUST00000160369 CcnoP0C242 352 aa15.16■□□□□ 0.02
Ercc1-203ENSMUST00000160369 Aimp1P31230 310 aaKnown RBP15.16■□□□□ 0.02
Ercc1-203ENSMUST00000160369 Sdc2P43407 202 aa15.16■□□□□ 0.02
Ercc1-203ENSMUST00000160369 Mrgprb8Q7TN51 330 aa15.16■□□□□ 0.02
Ercc1-203ENSMUST00000160369 DekQ7TNV0 380 aaKnown RBP15.16■□□□□ 0.02
Ercc1-203ENSMUST00000160369 FtoQ8BGW1 502 aa15.16■□□□□ 0.02
Ercc1-203ENSMUST00000160369 Adcy3Q8VHH7 1145 aa15.16■□□□□ 0.02
Ercc1-203ENSMUST00000160369 Spred2Q924S7 410 aa15.16■□□□□ 0.02
Ercc1-203ENSMUST00000160369 Ribc1Q9D0B8 379 aa15.16■□□□□ 0.02
Ercc1-203ENSMUST00000160369 Lrrc46Q9DAP0 323 aa15.16■□□□□ 0.02
Ercc1-203ENSMUST00000160369 Olig1Q9JKN5 260 aa15.16■□□□□ 0.02
Ercc1-203ENSMUST00000160369 Acox2Q9QXD1 681 aa15.16■□□□□ 0.02
Ercc1-203ENSMUST00000160369 Tatdn2B7ZNL9 783 aaKnown RBP15.15■□□□□ 0.02
Retrieved 100 of 22,080 RNA–protein pairs in 46.5 ms