RNA–Protein interactions for RNA: ENSMUST00000111044.2

Bdnf-204, Transcript of Brain-derived neurotrophic factor, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Bdnf, Length 3,854 nt, Biotype protein coding, Subcellular localisation Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Bdnf-204ENSMUST00000111044 Myl3P09542 204 aa8.01□□□□□ -1.13
Bdnf-204ENSMUST00000111044 Mylk4Q5SUV5 386 aa8.01□□□□□ -1.13
Bdnf-204ENSMUST00000111044 Bnip1Q6QD59 228 aa8.01□□□□□ -1.13
Bdnf-204ENSMUST00000111044 Fam107aQ78TU8 144 aa8.01□□□□□ -1.13
Bdnf-204ENSMUST00000111044 Ttc39bQ8BYY4 617 aa8.01□□□□□ -1.13
Bdnf-204ENSMUST00000111044 Washc1Q8VDD8 475 aa8.01□□□□□ -1.13
Bdnf-204ENSMUST00000111044 Tom1l1Q923U0 474 aa8.01□□□□□ -1.13
Bdnf-204ENSMUST00000111044 Mmtag2Q99LX5 260 aaKnown RBP8.01□□□□□ -1.13
Bdnf-204ENSMUST00000111044 Ap2b1Q9DBG3 937 aa8.01□□□□□ -1.13
Bdnf-204ENSMUST00000111044 Kat2aQ9JHD2 830 aa8.01□□□□□ -1.13
Bdnf-204ENSMUST00000111044 Gtf2ird1Q9JI57 1104 aaKnown RBP8.01□□□□□ -1.13
Bdnf-204ENSMUST00000111044 Phtf1Q9QZ09 761 aa8.01□□□□□ -1.13
Bdnf-204ENSMUST00000111044 Myh2G3UW82 1942 aa8□□□□□ -1.13
Bdnf-204ENSMUST00000111044 Bfsp1A2AMT1 669 aa8□□□□□ -1.13
Bdnf-204ENSMUST00000111044 Magea10A2AMW4 325 aa8□□□□□ -1.13
Bdnf-204ENSMUST00000111044 Heatr4E9Q357 955 aa8□□□□□ -1.13
Bdnf-204ENSMUST00000111044 Tmem132bF7BAB2 1078 aa8□□□□□ -1.13
Bdnf-204ENSMUST00000111044 Aff1O88573 1216 aa8□□□□□ -1.13
Bdnf-204ENSMUST00000111044 Vav1P27870 845 aa8□□□□□ -1.13
Bdnf-204ENSMUST00000111044 Man1a2P39098 641 aa8□□□□□ -1.13
Bdnf-204ENSMUST00000111044 Ccna1Q61456 421 aa8□□□□□ -1.13
Bdnf-204ENSMUST00000111044 Abtb2Q7TQI7 1024 aa8□□□□□ -1.13
Bdnf-204ENSMUST00000111044 Psmd5Q8BJY1 504 aa8□□□□□ -1.13
Bdnf-204ENSMUST00000111044 Tbl3Q8C4J7 801 aaKnown RBP8□□□□□ -1.13
Bdnf-204ENSMUST00000111044 Ccdc113Q8C5T8 377 aa8□□□□□ -1.13
Bdnf-204ENSMUST00000111044 Rbm5Q91YE7 815 aaKnown RBP8□□□□□ -1.13
Bdnf-204ENSMUST00000111044 AacsQ9D2R0 672 aa8□□□□□ -1.13
Bdnf-204ENSMUST00000111044 Tmem68Q9D850 329 aa8□□□□□ -1.13
Bdnf-204ENSMUST00000111044 Clcn2Q9R0A1 908 aa8□□□□□ -1.13
Bdnf-204ENSMUST00000111044 Gpaa1Q9WTK3 621 aa8□□□□□ -1.13
Bdnf-204ENSMUST00000111044 Col3a1P08121 1464 aa8□□□□□ -1.13
Bdnf-204ENSMUST00000111044 FocadA2AKG8 1798 aa8□□□□□ -1.13
Bdnf-204ENSMUST00000111044 6030498E09RikB1AX85 169 aa8□□□□□ -1.13
Bdnf-204ENSMUST00000111044 1700024B05RikE9Q6D7 167 aa8□□□□□ -1.13
Bdnf-204ENSMUST00000111044 Speer4dL7N216 212 aa8□□□□□ -1.13
Bdnf-204ENSMUST00000111044 Znf280dQ68FE8 974 aa8□□□□□ -1.13
Bdnf-204ENSMUST00000111044 Atl2Q6PA06 583 aa8□□□□□ -1.13
Bdnf-204ENSMUST00000111044 Nucks1Q80XU3 234 aaKnown RBP8□□□□□ -1.13
Bdnf-204ENSMUST00000111044 Rps6kc1Q8BLK9 1056 aa8□□□□□ -1.13
Bdnf-204ENSMUST00000111044 C130026I21RikQ8C898 291 aa8□□□□□ -1.13
Bdnf-204ENSMUST00000111044 Cep57Q8CEE0 500 aa8□□□□□ -1.13
Bdnf-204ENSMUST00000111044 Kbtbd4Q8R179 534 aa8□□□□□ -1.13
Bdnf-204ENSMUST00000111044 Irak4Q8R4K2 459 aa8□□□□□ -1.13
Bdnf-204ENSMUST00000111044 Slc35c2Q8VCX2 364 aa8□□□□□ -1.13
Bdnf-204ENSMUST00000111044 Ascc2Q91WR3 749 aa8□□□□□ -1.13
Bdnf-204ENSMUST00000111044 Pcdha3Q91Y16 942 aa8□□□□□ -1.13
Bdnf-204ENSMUST00000111044 Lzts2Q91YU6 671 aa8□□□□□ -1.13
Bdnf-204ENSMUST00000111044 Mfsd5Q921Y4 450 aa8□□□□□ -1.13
Bdnf-204ENSMUST00000111044 Hdac9Q99N13 588 aa8□□□□□ -1.13
Bdnf-204ENSMUST00000111044 Med21Q9CQ39 144 aa8□□□□□ -1.13
Bdnf-204ENSMUST00000111044 Thumpd2Q9CZB3 528 aa8□□□□□ -1.13
Bdnf-204ENSMUST00000111044 PlgrktQ9D3P8 147 aa8□□□□□ -1.13
Bdnf-204ENSMUST00000111044 Rnf138rt1Q9D9M9 248 aa8□□□□□ -1.13
Bdnf-204ENSMUST00000111044 IcmtQ9EQK7 283 aa8□□□□□ -1.13
Bdnf-204ENSMUST00000111044 Tmed2Q9R0Q3 201 aa8□□□□□ -1.13
Bdnf-204ENSMUST00000111044 Col18a1P39061 1774 aa8□□□□□ -1.13
Bdnf-204ENSMUST00000111044 Myl1P05977 188 aa8□□□□□ -1.13
Bdnf-204ENSMUST00000111044 PtprcP06800 1291 aa8□□□□□ -1.13
Bdnf-204ENSMUST00000111044 Syt2P46097 422 aa8□□□□□ -1.13
Bdnf-204ENSMUST00000111044 Fermt1P59113 677 aa8□□□□□ -1.13
Bdnf-204ENSMUST00000111044 Zc3h18Q0P678 948 aaKnown RBP8□□□□□ -1.13
Bdnf-204ENSMUST00000111044 P3h1Q3V1T4 739 aa8□□□□□ -1.13
Bdnf-204ENSMUST00000111044 Map3k12Q60700 888 aa8□□□□□ -1.13
Bdnf-204ENSMUST00000111044 Tfe3Q64092 572 aaKnown RBP8□□□□□ -1.13
Bdnf-204ENSMUST00000111044 Pram1Q6BCL1 675 aa8□□□□□ -1.13
Bdnf-204ENSMUST00000111044 Q8BGD0 127 aa8□□□□□ -1.13
Bdnf-204ENSMUST00000111044 Kcns3Q8BQZ8 491 aa8□□□□□ -1.13
Bdnf-204ENSMUST00000111044 Slx1bQ8BX32 270 aa8□□□□□ -1.13
Bdnf-204ENSMUST00000111044 TdrpQ8C5P7 182 aa8□□□□□ -1.13
Bdnf-204ENSMUST00000111044 Pus7lQ8CE46 702 aa8□□□□□ -1.13
Bdnf-204ENSMUST00000111044 Rbm19Q8R3C6 952 aaKnown RBP8□□□□□ -1.13
Bdnf-204ENSMUST00000111044 Tor1aip1Q921T2 595 aaKnown RBP8□□□□□ -1.13
Bdnf-204ENSMUST00000111044 Terb2Q9D494 218 aa8□□□□□ -1.13
Bdnf-204ENSMUST00000111044 Gm4985A2ALC6 410 aa7.99□□□□□ -1.13
Bdnf-204ENSMUST00000111044 Cfap221A9Q751 836 aa7.99□□□□□ -1.13
Bdnf-204ENSMUST00000111044 Zbtb11G5E8B9 1050 aaKnown RBP7.99□□□□□ -1.13
Bdnf-204ENSMUST00000111044 Zfp408H7BX78 710 aa7.99□□□□□ -1.13
Bdnf-204ENSMUST00000111044 Copb2O55029 905 aa7.99□□□□□ -1.13
Bdnf-204ENSMUST00000111044 Prl2c2P04095 224 aa7.99□□□□□ -1.13
Bdnf-204ENSMUST00000111044 Fen1P39749 378 aa7.99□□□□□ -1.13
Bdnf-204ENSMUST00000111044 Pstpip1P97814 415 aa7.99□□□□□ -1.13
Bdnf-204ENSMUST00000111044 HdxQ14B70 692 aa7.99□□□□□ -1.13
Bdnf-204ENSMUST00000111044 Zdhhc18Q5Y5T2 380 aa7.99□□□□□ -1.13
Bdnf-204ENSMUST00000111044 EregQ61521 162 aa7.99□□□□□ -1.13
Bdnf-204ENSMUST00000111044 Birc2Q62210 612 aa7.99□□□□□ -1.13
Bdnf-204ENSMUST00000111044 Ankfy1Q810B6 1169 aa7.99□□□□□ -1.13
Bdnf-204ENSMUST00000111044 Lrrc41Q8K1C9 807 aa7.99□□□□□ -1.13
Bdnf-204ENSMUST00000111044 Olfr805Q8VFI4 319 aa7.99□□□□□ -1.13
Bdnf-204ENSMUST00000111044 MgarpQ8VI64 283 aa7.99□□□□□ -1.13
Bdnf-204ENSMUST00000111044 Themis2Q91YX0 663 aa7.99□□□□□ -1.13
Bdnf-204ENSMUST00000111044 Nmd3Q99L48 503 aaKnown RBP7.99□□□□□ -1.13
Bdnf-204ENSMUST00000111044 Srfbp1Q9CZ91 441 aaKnown RBP7.99□□□□□ -1.13
Bdnf-204ENSMUST00000111044 Grtp1Q9D3N8 359 aa7.99□□□□□ -1.13
Bdnf-204ENSMUST00000111044 Nudt12Q9DCN1 462 aa7.99□□□□□ -1.13
Bdnf-204ENSMUST00000111044 Sh2d3cQ9QZS8 854 aa7.99□□□□□ -1.13
Bdnf-204ENSMUST00000111044 DexiQ9WUQ7 95 aa7.99□□□□□ -1.13
Bdnf-204ENSMUST00000111044 Zbed6D2EAC2 980 aa7.99□□□□□ -1.13
Bdnf-204ENSMUST00000111044 Rfx8D3YU81 596 aa7.99□□□□□ -1.13
Bdnf-204ENSMUST00000111044 Gm4297D3YWB7 211 aa7.99□□□□□ -1.13
Bdnf-204ENSMUST00000111044 Trim34bJ3QNR8 485 aa7.99□□□□□ -1.13
Retrieved 100 of 22,080 RNA–protein pairs in 14.2 ms