RNA–Protein interactions for RNA: ENSMUST00000108908.5

Scn8a-203, Transcript of Sodium channel protein type 8 subunit alpha, mousemouse

APPRIS ALT1 TSL 5 BASIC

Gene Scn8a, Length 7,030 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn8a-203ENSMUST00000108908 Gm3893E9Q1I1 302 aa11.78□□□□□ -0.52
Scn8a-203ENSMUST00000108908 PltpP55065 493 aa11.78□□□□□ -0.52
Scn8a-203ENSMUST00000108908 Sem1P60897 70 aa11.78□□□□□ -0.52
Scn8a-203ENSMUST00000108908 TwistnbQ78WZ7 330 aaKnown RBP11.78□□□□□ -0.52
Scn8a-203ENSMUST00000108908 Pcdha11Q91Y19 950 aa11.78□□□□□ -0.52
Scn8a-203ENSMUST00000108908 Llcfc1Q9D9P8 108 aa11.78□□□□□ -0.52
Scn8a-203ENSMUST00000108908 Abca17E9PX95 1733 aa11.78□□□□□ -0.52
Scn8a-203ENSMUST00000108908 Gm3371F7CQW8 167 aa11.78□□□□□ -0.52
Scn8a-203ENSMUST00000108908 Satb1Q60611 764 aa11.78□□□□□ -0.52
Scn8a-203ENSMUST00000108908 Snx2Q9CWK8 519 aa11.78□□□□□ -0.52
Scn8a-203ENSMUST00000108908 Mad2l2Q9D752 211 aa11.78□□□□□ -0.52
Scn8a-203ENSMUST00000108908 Acnat1A2AKK5 416 aa11.78□□□□□ -0.52
Scn8a-203ENSMUST00000108908 Prss40A6H6T1 365 aa11.78□□□□□ -0.52
Scn8a-203ENSMUST00000108908 Atp2c2A7L9Z8 944 aa11.78□□□□□ -0.52
Scn8a-203ENSMUST00000108908 Gnrh1P13562 90 aa11.78□□□□□ -0.52
Scn8a-203ENSMUST00000108908 Cdc25aP48964 514 aa11.78□□□□□ -0.52
Scn8a-203ENSMUST00000108908 Rbp3P49194 1234 aa11.78□□□□□ -0.52
Scn8a-203ENSMUST00000108908 Dsg1aQ61495 1057 aa11.78□□□□□ -0.52
Scn8a-203ENSMUST00000108908 KynuQ9CXF0 464 aa11.78□□□□□ -0.52
Scn8a-203ENSMUST00000108908 1700013H16RikQ9DAC5 291 aa11.78□□□□□ -0.52
Scn8a-203ENSMUST00000108908 Rbm6S4R1W5 1118 aaKnown RBP11.78□□□□□ -0.52
Scn8a-203ENSMUST00000108908 Rabgap1A2AWA9 1064 aa11.78□□□□□ -0.52
Scn8a-203ENSMUST00000108908 Trappc11B2RXC1 1133 aa11.78□□□□□ -0.52
Scn8a-203ENSMUST00000108908 CcnoP0C242 352 aa11.78□□□□□ -0.52
Scn8a-203ENSMUST00000108908 Arl4cP61208 192 aa11.78□□□□□ -0.52
Scn8a-203ENSMUST00000108908 Gbp10Q000W5 611 aa11.78□□□□□ -0.52
Scn8a-203ENSMUST00000108908 Krt31Q61765 416 aa11.78□□□□□ -0.52
Scn8a-203ENSMUST00000108908 Ddx3yQ62095 658 aaKnown RBP11.78□□□□□ -0.52
Scn8a-203ENSMUST00000108908 Tdpoz2Q717B2 364 aa11.78□□□□□ -0.52
Scn8a-203ENSMUST00000108908 Klhl29Q80T74 875 aa11.78□□□□□ -0.52
Scn8a-203ENSMUST00000108908 Nim1kQ8BHI9 436 aa11.78□□□□□ -0.52
Scn8a-203ENSMUST00000108908 Btbd7Q8CFE5 1130 aa11.78□□□□□ -0.52
Scn8a-203ENSMUST00000108908 Fam20aQ8CID3 541 aa11.78□□□□□ -0.52
Scn8a-203ENSMUST00000108908 Kif23E9Q5G3 953 aa11.78□□□□□ -0.52
Scn8a-203ENSMUST00000108908 Gjb6P70689 261 aa11.78□□□□□ -0.52
Scn8a-203ENSMUST00000108908 RnaselQ05921 735 aa11.78□□□□□ -0.52
Scn8a-203ENSMUST00000108908 Tnni3kQ5GIG6 834 aa11.78□□□□□ -0.52
Scn8a-203ENSMUST00000108908 Creb3Q61817 404 aa11.78□□□□□ -0.52
Scn8a-203ENSMUST00000108908 Fam102aQ78T81 392 aa11.78□□□□□ -0.52
Scn8a-203ENSMUST00000108908 Gm5622Q810Q0 167 aa11.78□□□□□ -0.52
Scn8a-203ENSMUST00000108908 Scrn2Q8VCA8 425 aa11.78□□□□□ -0.52
Scn8a-203ENSMUST00000108908 Rrp15Q9CYX7 281 aaKnown RBP11.78□□□□□ -0.52
Scn8a-203ENSMUST00000108908 Rcan1Q9JHG6 198 aa11.78□□□□□ -0.52
Scn8a-203ENSMUST00000108908 Anapc7Q9WVM3 565 aa11.78□□□□□ -0.52
Scn8a-203ENSMUST00000108908 Eya4Q9Z191 616 aa11.78□□□□□ -0.52
Scn8a-203ENSMUST00000108908 Crlf3Q9Z2L7 442 aa11.78□□□□□ -0.52
Scn8a-203ENSMUST00000108908 Plekhg4A0A1L1SU27 1217 aa11.78□□□□□ -0.52
Scn8a-203ENSMUST00000108908 Vmn2r87E9PZX4 848 aa11.78□□□□□ -0.52
Scn8a-203ENSMUST00000108908 Znf148Q61624 794 aa11.78□□□□□ -0.52
Scn8a-203ENSMUST00000108908 Hpcal4Q8BGZ1 191 aa11.78□□□□□ -0.52
Scn8a-203ENSMUST00000108908 Usp32F8VPZ3 1604 aa11.78□□□□□ -0.52
Scn8a-203ENSMUST00000108908 Grin2dQ03391 1323 aa11.77□□□□□ -0.52
Scn8a-203ENSMUST00000108908 Slc35g2D3YVE8 412 aa11.77□□□□□ -0.52
Scn8a-203ENSMUST00000108908 1700122O11RikJ3QPW6 241 aa11.77□□□□□ -0.52
Scn8a-203ENSMUST00000108908 Mtco1P00397 514 aa11.77□□□□□ -0.52
Scn8a-203ENSMUST00000108908 Zhx2Q8C0C0 836 aaKnown RBP11.77□□□□□ -0.52
Scn8a-203ENSMUST00000108908 Tasp1Q8R1G1 420 aa11.77□□□□□ -0.52
Scn8a-203ENSMUST00000108908 Orc3Q9JK30 715 aaKnown RBP11.77□□□□□ -0.52
Scn8a-203ENSMUST00000108908 AdgbG3UZ78 1657 aa11.77□□□□□ -0.52
Scn8a-203ENSMUST00000108908 Ttc13A0A1L1SSC7 844 aa11.77□□□□□ -0.52
Scn8a-203ENSMUST00000108908 Psmd14O35593 310 aa11.77□□□□□ -0.52
Scn8a-203ENSMUST00000108908 Pla2g4bP0C871 782 aa11.77□□□□□ -0.52
Scn8a-203ENSMUST00000108908 Cap1P40124 474 aa11.77□□□□□ -0.52
Scn8a-203ENSMUST00000108908 Hipk4Q3V016 616 aa11.77□□□□□ -0.52
Scn8a-203ENSMUST00000108908 Ece1Q4PZA2 769 aa11.77□□□□□ -0.52
Scn8a-203ENSMUST00000108908 Slc9c1Q6UJY2 1175 aa11.77□□□□□ -0.52
Scn8a-203ENSMUST00000108908 PolrmtQ8BKF1 1207 aaKnown RBP11.77□□□□□ -0.52
Scn8a-203ENSMUST00000108908 Morc4Q8BMD7 928 aa11.77□□□□□ -0.52
Scn8a-203ENSMUST00000108908 Arhgap29Q8CGF1 1266 aa11.77□□□□□ -0.52
Scn8a-203ENSMUST00000108908 SmtnQ921U8 923 aa11.77□□□□□ -0.52
Scn8a-203ENSMUST00000108908 Ranbp17Q99NF8 1088 aa11.77□□□□□ -0.52
Scn8a-203ENSMUST00000108908 ArpinQ9D0A3 226 aa11.77□□□□□ -0.52
Scn8a-203ENSMUST00000108908 Dthd1E9PZX1 795 aa11.77□□□□□ -0.53
Scn8a-203ENSMUST00000108908 Kcnma1Q08460 1209 aa11.77□□□□□ -0.53
Scn8a-203ENSMUST00000108908 Skap1Q3UUV5 355 aa11.77□□□□□ -0.53
Scn8a-203ENSMUST00000108908 Slc39a11Q8BWY7 342 aa11.77□□□□□ -0.53
Scn8a-203ENSMUST00000108908 Orc1Q9Z1N2 840 aaKnown RBP11.77□□□□□ -0.53
Scn8a-203ENSMUST00000108908 Serpinb3cA2RSF9 386 aa11.77□□□□□ -0.53
Scn8a-203ENSMUST00000108908 AfmO89020 608 aa11.77□□□□□ -0.53
Scn8a-203ENSMUST00000108908 Chp1P61022 195 aa11.77□□□□□ -0.53
Scn8a-203ENSMUST00000108908 Grm4Q68EF4 912 aa11.77□□□□□ -0.53
Scn8a-203ENSMUST00000108908 Wdr64Q9D565 1086 aa11.77□□□□□ -0.53
Scn8a-203ENSMUST00000108908 Slc12a1P55014 1095 aa11.77□□□□□ -0.53
Scn8a-203ENSMUST00000108908 NfixP70257 488 aa11.77□□□□□ -0.53
Scn8a-203ENSMUST00000108908 Itih3Q61704 889 aa11.77□□□□□ -0.53
Scn8a-203ENSMUST00000108908 TfrcQ62351 763 aaKnown RBP11.77□□□□□ -0.53
Scn8a-203ENSMUST00000108908 Phka2Q8BWJ3 1235 aa11.77□□□□□ -0.53
Scn8a-203ENSMUST00000108908 1700129C05RikQ9CQ77 218 aa11.77□□□□□ -0.53
Scn8a-203ENSMUST00000108908 Styxl1Q9DAR2 321 aa11.77□□□□□ -0.53
Scn8a-203ENSMUST00000108908 MagohP61327 146 aaKnown RBP11.76□□□□□ -0.53
Scn8a-203ENSMUST00000108908 Amz1Q8BVF9 502 aa11.76□□□□□ -0.53
Scn8a-203ENSMUST00000108908 Bag5Q8CI32 447 aa11.76□□□□□ -0.53
Scn8a-203ENSMUST00000108908 Ube2sQ921J4 223 aa11.76□□□□□ -0.53
Scn8a-203ENSMUST00000108908 Sf3b3Q921M3 1217 aaKnown RBP11.76□□□□□ -0.53
Scn8a-203ENSMUST00000108908 MagohbQ9CQL1 146 aa11.76□□□□□ -0.53
Scn8a-203ENSMUST00000108908 Sugt1Q9CX34 336 aa11.76□□□□□ -0.53
Scn8a-203ENSMUST00000108908 AatfQ9JKX4 526 aaKnown RBP11.76□□□□□ -0.53
Scn8a-203ENSMUST00000108908 B3galt4Q9Z0F0 371 aa11.76□□□□□ -0.53
Scn8a-203ENSMUST00000108908 HpdP49429 393 aa11.76□□□□□ -0.53
Scn8a-203ENSMUST00000108908 Usp10P52479 792 aaKnown RBP11.76□□□□□ -0.53
Retrieved 100 of 22,080 RNA–protein pairs in 24.8 ms