RNA–Protein interactions for RNA: ENSMUST00000057185.12

Pcdh1-201, Transcript of Protocadherin 1 (Fragment), mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcdh1, Length 3,902 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1-201ENSMUST00000057185 Pabpc6Q9D4E6 643 aaKnown RBP10.45□□□□□ -0.74
Pcdh1-201ENSMUST00000057185 Cnot8Q9D8X5 292 aa10.45□□□□□ -0.74
Pcdh1-201ENSMUST00000057185 Mxra8Q9DBV4 442 aa10.45□□□□□ -0.74
Pcdh1-201ENSMUST00000057185 Tlr2Q9QUN7 784 aa10.45□□□□□ -0.74
Pcdh1-201ENSMUST00000057185 JmyQ9QXM1 983 aa10.45□□□□□ -0.74
Pcdh1-201ENSMUST00000057185 Pdzd4Q9QY39 772 aa10.45□□□□□ -0.74
Pcdh1-201ENSMUST00000057185 Tmed2Q9R0Q3 201 aa10.45□□□□□ -0.74
Pcdh1-201ENSMUST00000057185 Adam22Q9R1V6 904 aa10.45□□□□□ -0.74
Pcdh1-201ENSMUST00000057185 Scgb2b12S4R2L0 112 aa10.45□□□□□ -0.74
Pcdh1-201ENSMUST00000057185 Magea10A2AMW4 325 aa10.45□□□□□ -0.74
Pcdh1-201ENSMUST00000057185 Cyp11b1Q3TG86 501 aa10.45□□□□□ -0.74
Pcdh1-201ENSMUST00000057185 Adad1Q5SUE7 619 aa10.45□□□□□ -0.74
Pcdh1-201ENSMUST00000057185 Cacna2d2Q6PHS9 1154 aa10.45□□□□□ -0.74
Pcdh1-201ENSMUST00000057185 Mageb18Q8BQR7 327 aa10.45□□□□□ -0.74
Pcdh1-201ENSMUST00000057185 Serpinb13Q8CDC0 389 aa10.45□□□□□ -0.74
Pcdh1-201ENSMUST00000057185 Msantd4Q91YU3 345 aa10.45□□□□□ -0.74
Pcdh1-201ENSMUST00000057185 Tnpo2Q99LG2 887 aaKnown RBP10.45□□□□□ -0.74
Pcdh1-201ENSMUST00000057185 Mageb16Q9CWV4 363 aa10.45□□□□□ -0.74
Pcdh1-201ENSMUST00000057185 NkapQ9D0F4 415 aaKnown RBP10.45□□□□□ -0.74
Pcdh1-201ENSMUST00000057185 Llcfc1Q9D9P8 108 aa10.45□□□□□ -0.74
Pcdh1-201ENSMUST00000057185 Cib2Q9Z309 187 aa10.45□□□□□ -0.74
Pcdh1-201ENSMUST00000057185 Greb1lB9EJV3 1913 aa10.45□□□□□ -0.74
Pcdh1-201ENSMUST00000057185 Trappc11B2RXC1 1133 aa10.45□□□□□ -0.74
Pcdh1-201ENSMUST00000057185 Fam129cD3YZB0 591 aa10.45□□□□□ -0.74
Pcdh1-201ENSMUST00000057185 Gsta4P24472 222 aa10.45□□□□□ -0.74
Pcdh1-201ENSMUST00000057185 Vcam1P29533 739 aa10.45□□□□□ -0.74
Pcdh1-201ENSMUST00000057185 Gbp1Q01514 589 aa10.45□□□□□ -0.74
Pcdh1-201ENSMUST00000057185 Ppp2r5eQ61151 467 aa10.45□□□□□ -0.74
Pcdh1-201ENSMUST00000057185 Fmnl3Q6ZPF4 1028 aa10.45□□□□□ -0.74
Pcdh1-201ENSMUST00000057185 Ankfy1Q810B6 1169 aa10.45□□□□□ -0.74
Pcdh1-201ENSMUST00000057185 Nop9Q8BMC4 636 aaKnown RBP10.45□□□□□ -0.74
Pcdh1-201ENSMUST00000057185 Acbd3Q8BMP6 525 aa10.45□□□□□ -0.74
Pcdh1-201ENSMUST00000057185 NkrfQ8BY02 690 aaKnown RBP10.45□□□□□ -0.74
Pcdh1-201ENSMUST00000057185 Zfp449Q8CB76 518 aa10.45□□□□□ -0.74
Pcdh1-201ENSMUST00000057185 P3h4Q8K2B0 443 aa10.45□□□□□ -0.74
Pcdh1-201ENSMUST00000057185 Lztr1Q9CQ33 837 aa10.45□□□□□ -0.74
Pcdh1-201ENSMUST00000057185 Scgb2b20Q9JI02 112 aa10.45□□□□□ -0.74
Pcdh1-201ENSMUST00000057185 Sertad2Q9JJG5 309 aa10.45□□□□□ -0.74
Pcdh1-201ENSMUST00000057185 SpertQ32MG2 446 aa10.44□□□□□ -0.74
Pcdh1-201ENSMUST00000057185 TchpQ3TVW5 497 aa10.44□□□□□ -0.74
Pcdh1-201ENSMUST00000057185 Spout1Q3UHX9 385 aaKnown RBP10.44□□□□□ -0.74
Pcdh1-201ENSMUST00000057185 Cracr2aQ3UP38 310 aa10.44□□□□□ -0.74
Pcdh1-201ENSMUST00000057185 Nr2e1Q64104 385 aa10.44□□□□□ -0.74
Pcdh1-201ENSMUST00000057185 Best3Q6H1V1 669 aa10.44□□□□□ -0.74
Pcdh1-201ENSMUST00000057185 Dcaf8Q8N7N5 591 aa10.44□□□□□ -0.74
Pcdh1-201ENSMUST00000057185 Slf1Q8R3P9 1054 aa10.44□□□□□ -0.74
Pcdh1-201ENSMUST00000057185 Tti1Q91V83 1085 aa10.44□□□□□ -0.74
Pcdh1-201ENSMUST00000057185 Xpo6Q924Z6 1125 aa10.44□□□□□ -0.74
Pcdh1-201ENSMUST00000057185 Golga1Q9CW79 758 aa10.44□□□□□ -0.74
Pcdh1-201ENSMUST00000057185 Cst12Q9DAN8 128 aa10.44□□□□□ -0.74
Pcdh1-201ENSMUST00000057185 Prss51A0A286YDY8 319 aa10.44□□□□□ -0.74
Pcdh1-201ENSMUST00000057185 Klra1P20937 262 aa10.44□□□□□ -0.74
Pcdh1-201ENSMUST00000057185 NsfP46460 744 aa10.44□□□□□ -0.74
Pcdh1-201ENSMUST00000057185 G3bp2P97379 482 aaKnown RBP10.44□□□□□ -0.74
Pcdh1-201ENSMUST00000057185 Nsun2Q1HFZ0 757 aaKnown RBP10.44□□□□□ -0.74
Pcdh1-201ENSMUST00000057185 Wdr41Q3UDP0 460 aa10.44□□□□□ -0.74
Pcdh1-201ENSMUST00000057185 Q6DFW0 481 aa10.44□□□□□ -0.74
Pcdh1-201ENSMUST00000057185 Stkld1Q80YS9 662 aa10.44□□□□□ -0.74
Pcdh1-201ENSMUST00000057185 Zhx2Q8C0C0 836 aaKnown RBP10.44□□□□□ -0.74
Pcdh1-201ENSMUST00000057185 Uba6Q8C7R4 1053 aa10.44□□□□□ -0.74
Pcdh1-201ENSMUST00000057185 Kat5Q8CHK4 513 aa10.44□□□□□ -0.74
Pcdh1-201ENSMUST00000057185 Lonrf2B2RT44 518 aa10.44□□□□□ -0.74
Pcdh1-201ENSMUST00000057185 Gsg1l2M0QWL6 290 aa10.44□□□□□ -0.74
Pcdh1-201ENSMUST00000057185 Flot1O08917 428 aa10.44□□□□□ -0.74
Pcdh1-201ENSMUST00000057185 Flt1P35969 1333 aa10.44□□□□□ -0.74
Pcdh1-201ENSMUST00000057185 Hspa9P38647 679 aaKnown RBP10.44□□□□□ -0.74
Pcdh1-201ENSMUST00000057185 4930502E18RikQ14BQ3 236 aa10.44□□□□□ -0.74
Pcdh1-201ENSMUST00000057185 FdxrQ61578 494 aa10.44□□□□□ -0.74
Pcdh1-201ENSMUST00000057185 Tshz2Q68FE9 1030 aa10.44□□□□□ -0.74
Pcdh1-201ENSMUST00000057185 Enoph1Q8BGB7 257 aa10.44□□□□□ -0.74
Pcdh1-201ENSMUST00000057185 Slc25a38Q91XD8 326 aa10.44□□□□□ -0.74
Pcdh1-201ENSMUST00000057185 Xab2Q9DCD2 855 aaKnown RBP10.44□□□□□ -0.74
Pcdh1-201ENSMUST00000057185 Syngap1F6SEU4 1340 aa10.43□□□□□ -0.74
Pcdh1-201ENSMUST00000057185 Ildr2B5TVM2 661 aa10.43□□□□□ -0.74
Pcdh1-201ENSMUST00000057185 Slc16a2O70324 545 aa10.43□□□□□ -0.74
Pcdh1-201ENSMUST00000057185 ArP19091 899 aa10.43□□□□□ -0.74
Pcdh1-201ENSMUST00000057185 Pde1bQ01065 535 aa10.43□□□□□ -0.74
Pcdh1-201ENSMUST00000057185 E2f5Q61502 335 aa10.43□□□□□ -0.74
Pcdh1-201ENSMUST00000057185 Tm4sf1Q64302 202 aa10.43□□□□□ -0.74
Pcdh1-201ENSMUST00000057185 Gpr180Q8BPS4 441 aa10.43□□□□□ -0.74
Pcdh1-201ENSMUST00000057185 Pkn2Q8BWW9 983 aa10.43□□□□□ -0.74
Pcdh1-201ENSMUST00000057185 Plekhg6Q8R0J1 787 aa10.43□□□□□ -0.74
Pcdh1-201ENSMUST00000057185 Vps37bQ8R0J7 285 aa10.43□□□□□ -0.74
Pcdh1-201ENSMUST00000057185 Acot11Q8VHQ9 594 aa10.43□□□□□ -0.74
Pcdh1-201ENSMUST00000057185 Hs6st3Q9QYK4 470 aa10.43□□□□□ -0.74
Pcdh1-201ENSMUST00000057185 Usp31E9Q6Y8 1344 aa10.43□□□□□ -0.74
Pcdh1-201ENSMUST00000057185 Lrrc38A2VDH3 298 aa10.43□□□□□ -0.74
Pcdh1-201ENSMUST00000057185 Scgb2b7D3YYY1 112 aa10.43□□□□□ -0.74
Pcdh1-201ENSMUST00000057185 Gm3095E9Q058 166 aa10.43□□□□□ -0.74
Pcdh1-201ENSMUST00000057185 Myo1eE9Q634 1107 aa10.43□□□□□ -0.74
Pcdh1-201ENSMUST00000057185 Casp8O89110 480 aa10.43□□□□□ -0.74
Pcdh1-201ENSMUST00000057185 Eps15P42567 897 aa10.43□□□□□ -0.74
Pcdh1-201ENSMUST00000057185 Apba2P98084 750 aa10.43□□□□□ -0.74
Pcdh1-201ENSMUST00000057185 Dact3Q0PHV7 610 aa10.43□□□□□ -0.74
Pcdh1-201ENSMUST00000057185 Nlrp4cQ3TKR3 982 aa10.43□□□□□ -0.74
Pcdh1-201ENSMUST00000057185 Ksr1Q61097 873 aa10.43□□□□□ -0.74
Pcdh1-201ENSMUST00000057185 Nell2Q61220 819 aa10.43□□□□□ -0.74
Pcdh1-201ENSMUST00000057185 Epha7Q61772 998 aa10.43□□□□□ -0.74
Pcdh1-201ENSMUST00000057185 Kcnt1Q6ZPR4 1224 aa10.43□□□□□ -0.74
Pcdh1-201ENSMUST00000057185 Armc6Q8BNU0 468 aa10.43□□□□□ -0.74
Retrieved 100 of 22,080 RNA–protein pairs in 33.9 ms