RNA–Protein interactions for RNA: ENSMUST00000040182.12

Ccdc88a-201, Transcript of Girdin, mousemouse

APPRIS P1 TSL 5 BASIC

Gene Ccdc88a, Length 9,376 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88a-201ENSMUST00000040182 Heatr9Q5QNV8 569 aa17.57■□□□□ 0.4
Ccdc88a-201ENSMUST00000040182 Q8C5C9 218 aa17.57■□□□□ 0.4
Ccdc88a-201ENSMUST00000040182 Uba6Q8C7R4 1053 aa17.57■□□□□ 0.4
Ccdc88a-201ENSMUST00000040182 Eps8Q08509 821 aa17.56■□□□□ 0.4
Ccdc88a-201ENSMUST00000040182 RasefQ5RI75 627 aa17.56■□□□□ 0.4
Ccdc88a-201ENSMUST00000040182 Szrd1Q6NXN1 152 aa17.56■□□□□ 0.4
Ccdc88a-201ENSMUST00000040182 Rundc3bQ6PDC0 408 aa17.56■□□□□ 0.4
Ccdc88a-201ENSMUST00000040182 Ttc23Q8CHY7 488 aa17.56■□□□□ 0.4
Ccdc88a-201ENSMUST00000040182 GakQ99KY4 1305 aa17.56■□□□□ 0.4
Ccdc88a-201ENSMUST00000040182 Ccdc24E9PUW8 296 aa17.56■□□□□ 0.4
Ccdc88a-201ENSMUST00000040182 Hmgxb3G3X9M3 1254 aa17.56■□□□□ 0.4
Ccdc88a-201ENSMUST00000040182 Stmn3O70166 180 aa17.56■□□□□ 0.4
Ccdc88a-201ENSMUST00000040182 Psmc1P62192 440 aa17.56■□□□□ 0.4
Ccdc88a-201ENSMUST00000040182 Gm5592Q3V0A6 857 aa17.56■□□□□ 0.4
Ccdc88a-201ENSMUST00000040182 Zfp566Q8VCI1 386 aa17.56■□□□□ 0.4
Ccdc88a-201ENSMUST00000040182 Txndc9Q9CQ79 226 aa17.56■□□□□ 0.4
Ccdc88a-201ENSMUST00000040182 Mrpl46Q9EQI8 283 aa17.56■□□□□ 0.4
Ccdc88a-201ENSMUST00000040182 Slc4a9E9PUP3 929 aa17.56■□□□□ 0.4
Ccdc88a-201ENSMUST00000040182 Hoxb8P09632 243 aa17.56■□□□□ 0.4
Ccdc88a-201ENSMUST00000040182 Ppp3ccP48455 513 aa17.56■□□□□ 0.4
Ccdc88a-201ENSMUST00000040182 GmncQ3URY2 333 aa17.56■□□□□ 0.4
Ccdc88a-201ENSMUST00000040182 Tmem247Q497K7 211 aa17.56■□□□□ 0.4
Ccdc88a-201ENSMUST00000040182 Tada1Q99LM9 335 aa17.56■□□□□ 0.4
Ccdc88a-201ENSMUST00000040182 Tbc1d22bQ80VE5 505 aa17.56■□□□□ 0.4
Ccdc88a-201ENSMUST00000040182 Psmd5Q8BJY1 504 aa17.56■□□□□ 0.4
Ccdc88a-201ENSMUST00000040182 Cct7P80313 544 aa17.56■□□□□ 0.4
Ccdc88a-201ENSMUST00000040182 Ncoa4Q5U4H9 625 aa17.56■□□□□ 0.4
Ccdc88a-201ENSMUST00000040182 Rtl3Q6P1Y1 553 aa17.56■□□□□ 0.4
Ccdc88a-201ENSMUST00000040182 Gid8Q9D7M1 228 aa17.56■□□□□ 0.4
Ccdc88a-201ENSMUST00000040182 Cnot8Q9D8X5 292 aa17.56■□□□□ 0.4
Ccdc88a-201ENSMUST00000040182 GdaQ9R111 454 aa17.56■□□□□ 0.4
Ccdc88a-201ENSMUST00000040182 Akap12Q9WTQ5 1684 aa17.56■□□□□ 0.4
Ccdc88a-201ENSMUST00000040182 Myo5cE9Q1F5 1742 aa17.56■□□□□ 0.4
Ccdc88a-201ENSMUST00000040182 Zfp558E9Q1J0 407 aa17.56■□□□□ 0.4
Ccdc88a-201ENSMUST00000040182 Gm8926L7MUE8 181 aa17.56■□□□□ 0.4
Ccdc88a-201ENSMUST00000040182 Cdc25aP48964 514 aa17.56■□□□□ 0.4
Ccdc88a-201ENSMUST00000040182 Ccdc51Q3URS9 406 aa17.56■□□□□ 0.4
Ccdc88a-201ENSMUST00000040182 StrbpQ91WM1 672 aaKnown RBP17.56■□□□□ 0.4
Ccdc88a-201ENSMUST00000040182 Ndel1Q9ERR1 345 aa17.56■□□□□ 0.4
Ccdc88a-201ENSMUST00000040182 Rbm6S4R1W5 1118 aaKnown RBP17.56■□□□□ 0.4
Ccdc88a-201ENSMUST00000040182 Nr1h4Q60641 488 aa17.56■□□□□ 0.4
Ccdc88a-201ENSMUST00000040182 Ddit3P35639 168 aa17.55■□□□□ 0.4
Ccdc88a-201ENSMUST00000040182 Runx2Q08775 607 aa17.55■□□□□ 0.4
Ccdc88a-201ENSMUST00000040182 MypnQ5DTJ9 1315 aa17.55■□□□□ 0.4
Ccdc88a-201ENSMUST00000040182 Atp7bQ64446 1462 aa17.55■□□□□ 0.4
Ccdc88a-201ENSMUST00000040182 BegainQ68EF6 600 aa17.55■□□□□ 0.4
Ccdc88a-201ENSMUST00000040182 Lrrc46Q9DAP0 323 aa17.55■□□□□ 0.4
Ccdc88a-201ENSMUST00000040182 SmapQ9R0P4 181 aaKnown RBP17.55■□□□□ 0.4
Ccdc88a-201ENSMUST00000040182 Bub1bQ9Z1S0 1052 aa17.55■□□□□ 0.4
Ccdc88a-201ENSMUST00000040182 Osbpl10S4R1M9 766 aa17.55■□□□□ 0.4
Ccdc88a-201ENSMUST00000040182 Slc13a5Q67BT3 572 aa17.55■□□□□ 0.4
Ccdc88a-201ENSMUST00000040182 Rmnd1Q8CI78 450 aa17.55■□□□□ 0.4
Ccdc88a-201ENSMUST00000040182 Trip10Q8CJ53 603 aa17.55■□□□□ 0.4
Ccdc88a-201ENSMUST00000040182 Trpc4Q9QUQ5 974 aa17.55■□□□□ 0.4
Ccdc88a-201ENSMUST00000040182 Ifi207E9Q3L4 978 aa17.55■□□□□ 0.4
Ccdc88a-201ENSMUST00000040182 Kifc3O35231 824 aa17.55■□□□□ 0.4
Ccdc88a-201ENSMUST00000040182 Lrig2Q52KR2 1054 aa17.55■□□□□ 0.4
Ccdc88a-201ENSMUST00000040182 EmsyQ8BMB0 1264 aaKnown RBP17.55■□□□□ 0.4
Ccdc88a-201ENSMUST00000040182 Ccdc90bQ8C3X2 256 aa17.55■□□□□ 0.4
Ccdc88a-201ENSMUST00000040182 Sept10Q8C650 452 aa17.55■□□□□ 0.4
Ccdc88a-201ENSMUST00000040182 Xlr3aQ60595 226 aa17.55■□□□□ 0.4
Ccdc88a-201ENSMUST00000040182 Nxf7Q80SZ6 620 aaKnown RBP17.55■□□□□ 0.4
Ccdc88a-201ENSMUST00000040182 Phf20Q8BLG0 1010 aaKnown RBP17.55■□□□□ 0.4
Ccdc88a-201ENSMUST00000040182 Twf2Q9Z0P5 349 aaKnown RBP17.55■□□□□ 0.4
Ccdc88a-201ENSMUST00000040182 Ccdc144bE9PVZ3 520 aa17.55■□□□□ 0.4
Ccdc88a-201ENSMUST00000040182 Ifnl2Q4VK74 193 aa17.55■□□□□ 0.4
Ccdc88a-201ENSMUST00000040182 Swi5Q8K3D3 89 aa17.55■□□□□ 0.4
Ccdc88a-201ENSMUST00000040182 Grk2Q99MK8 689 aa17.55■□□□□ 0.4
Ccdc88a-201ENSMUST00000040182 Trappc11B2RXC1 1133 aa17.55■□□□□ 0.4
Ccdc88a-201ENSMUST00000040182 Trim15G3UY57 292 aa17.55■□□□□ 0.4
Ccdc88a-201ENSMUST00000040182 Gm7942L7N277 499 aa17.55■□□□□ 0.4
Ccdc88a-201ENSMUST00000040182 Cacna2d1O08532 1103 aa17.55■□□□□ 0.4
Ccdc88a-201ENSMUST00000040182 Znf532Q6NXK2 1036 aa17.55■□□□□ 0.4
Ccdc88a-201ENSMUST00000040182 Dcaf5Q80T85 946 aa17.55■□□□□ 0.4
Ccdc88a-201ENSMUST00000040182 Scrn2Q8VCA8 425 aa17.55■□□□□ 0.4
Ccdc88a-201ENSMUST00000040182 FtcdQ91XD4 541 aa17.55■□□□□ 0.4
Ccdc88a-201ENSMUST00000040182 Serpina1eQ00898 413 aa17.55■□□□□ 0.4
Ccdc88a-201ENSMUST00000040182 HibchQ8QZS1 385 aa17.55■□□□□ 0.4
Ccdc88a-201ENSMUST00000040182 Rgl1Q60695 768 aa17.54■□□□□ 0.4
Ccdc88a-201ENSMUST00000040182 Ces1eQ64176 562 aa17.54■□□□□ 0.4
Ccdc88a-201ENSMUST00000040182 Prrg3Q6PAQ9 231 aa17.54■□□□□ 0.4
Ccdc88a-201ENSMUST00000040182 Sh3tc2Q80VA5 1289 aa17.54■□□□□ 0.4
Ccdc88a-201ENSMUST00000040182 Tasp1Q8R1G1 420 aa17.54■□□□□ 0.4
Ccdc88a-201ENSMUST00000040182 Adam22Q9R1V6 904 aa17.54■□□□□ 0.4
Ccdc88a-201ENSMUST00000040182 Gm7535F7CXE4 302 aa17.54■□□□□ 0.4
Ccdc88a-201ENSMUST00000040182 Nrg3O35181 713 aa17.54■□□□□ 0.4
Ccdc88a-201ENSMUST00000040182 D1Pas1P16381 660 aa17.54■□□□□ 0.4
Ccdc88a-201ENSMUST00000040182 Olfm4Q3UZZ4 505 aa17.54■□□□□ 0.4
Ccdc88a-201ENSMUST00000040182 Phactr3Q8BYK5 558 aa17.54■□□□□ 0.4
Ccdc88a-201ENSMUST00000040182 Ccdc80Q8R2G6 949 aa17.54■□□□□ 0.4
Ccdc88a-201ENSMUST00000040182 Pcdhb11Q91UZ8 797 aa17.54■□□□□ 0.4
Ccdc88a-201ENSMUST00000040182 Tmem192Q9CXT7 266 aa17.54■□□□□ 0.4
Ccdc88a-201ENSMUST00000040182 Psmb9P28076 219 aa17.54■□□□□ 0.4
Ccdc88a-201ENSMUST00000040182 SftpbP50405 377 aa17.54■□□□□ 0.4
Ccdc88a-201ENSMUST00000040182 Kpnb1P70168 876 aaKnown RBP17.54■□□□□ 0.4
Ccdc88a-201ENSMUST00000040182 Peg12Q9WVA7 283 aa17.54■□□□□ 0.4
Ccdc88a-201ENSMUST00000040182 Exosc10P56960 887 aaKnown RBP17.54■□□□□ 0.4
Ccdc88a-201ENSMUST00000040182 Hipk4Q3V016 616 aa17.54■□□□□ 0.4
Ccdc88a-201ENSMUST00000040182 Spata21Q8BHW6 681 aa17.54■□□□□ 0.4
Ccdc88a-201ENSMUST00000040182 Tcp11l2Q8K1H7 517 aa17.54■□□□□ 0.4
Retrieved 100 of 22,080 RNA–protein pairs in 21.8 ms