RNA–Protein interactions for RNA: ENSMUST00000035283.10

Nup88-201, Transcript of Nuclear pore complex protein Nup88, mousemouse

TSL 1 (best) BASIC

Gene Nup88, Length 2,450 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88-201ENSMUST00000035283 Eya4Q9Z191 616 aa14.47□□□□□ -0.09
Nup88-201ENSMUST00000035283 Astn1Q61137 1302 aa14.47□□□□□ -0.09
Nup88-201ENSMUST00000035283 Gm4297D3YWB7 211 aa14.47□□□□□ -0.09
Nup88-201ENSMUST00000035283 Tp53P02340 387 aa14.47□□□□□ -0.09
Nup88-201ENSMUST00000035283 Xxylt1Q3U4G3 392 aa14.47□□□□□ -0.09
Nup88-201ENSMUST00000035283 Trim80Q3V061 624 aa14.47□□□□□ -0.09
Nup88-201ENSMUST00000035283 Ctc1Q5SUQ9 1212 aa14.47□□□□□ -0.09
Nup88-201ENSMUST00000035283 Adat2Q6P6J0 191 aa14.47□□□□□ -0.09
Nup88-201ENSMUST00000035283 TbataQ7TSD4 393 aa14.47□□□□□ -0.09
Nup88-201ENSMUST00000035283 Ubap1Q8BH48 502 aa14.47□□□□□ -0.09
Nup88-201ENSMUST00000035283 Kiaa0319lQ8K135 1048 aa14.47□□□□□ -0.09
Nup88-201ENSMUST00000035283 Amhr2Q8K592 568 aa14.47□□□□□ -0.09
Nup88-201ENSMUST00000035283 Themis2Q91YX0 663 aa14.47□□□□□ -0.09
Nup88-201ENSMUST00000035283 Grk1Q9WVL4 564 aa14.47□□□□□ -0.09
Nup88-201ENSMUST00000035283 Rap1gds1E9Q912 607 aa14.46□□□□□ -0.09
Nup88-201ENSMUST00000035283 Pex5O09012 639 aa14.46□□□□□ -0.09
Nup88-201ENSMUST00000035283 Cdk14O35495 469 aa14.46□□□□□ -0.09
Nup88-201ENSMUST00000035283 IvlP48997 467 aa14.46□□□□□ -0.09
Nup88-201ENSMUST00000035283 Ugt1a2P70691 533 aa14.46□□□□□ -0.09
Nup88-201ENSMUST00000035283 Vps41Q5KU39 853 aa14.46□□□□□ -0.09
Nup88-201ENSMUST00000035283 OgdhQ60597 1023 aaKnown RBP14.46□□□□□ -0.09
Nup88-201ENSMUST00000035283 ChukQ60680 745 aa14.46□□□□□ -0.09
Nup88-201ENSMUST00000035283 Map3k12Q60700 888 aa14.46□□□□□ -0.09
Nup88-201ENSMUST00000035283 Ctnna2Q61301 953 aa14.46□□□□□ -0.09
Nup88-201ENSMUST00000035283 Depdc1bQ8BH88 529 aa14.46□□□□□ -0.09
Nup88-201ENSMUST00000035283 Nop53Q8BK35 484 aaKnown RBP14.46□□□□□ -0.09
Nup88-201ENSMUST00000035283 Lmo3Q8BZL8 145 aa14.46□□□□□ -0.09
Nup88-201ENSMUST00000035283 Ccdc113Q8C5T8 377 aa14.46□□□□□ -0.09
Nup88-201ENSMUST00000035283 Btbd9Q8C726 612 aa14.46□□□□□ -0.09
Nup88-201ENSMUST00000035283 Ints9Q8K114 658 aaKnown RBP14.46□□□□□ -0.09
Nup88-201ENSMUST00000035283 Unc5bQ8K1S3 945 aa14.46□□□□□ -0.09
Nup88-201ENSMUST00000035283 Dcaf8Q8N7N5 591 aa14.46□□□□□ -0.09
Nup88-201ENSMUST00000035283 Ptf1aQ9QX98 324 aa14.46□□□□□ -0.09
Nup88-201ENSMUST00000035283 IkQ9Z1M8 557 aaKnown RBP14.46□□□□□ -0.09
Nup88-201ENSMUST00000035283 RptorQ8K4Q0 1335 aa14.46□□□□□ -0.09
Nup88-201ENSMUST00000035283 Gm5936A2BG95 728 aa14.46□□□□□ -0.1
Nup88-201ENSMUST00000035283 Gm5640A3KG49 728 aa14.46□□□□□ -0.1
Nup88-201ENSMUST00000035283 March10E9PX79 788 aa14.46□□□□□ -0.1
Nup88-201ENSMUST00000035283 Zc3h7bF8VPP8 982 aaKnown RBP14.46□□□□□ -0.1
Nup88-201ENSMUST00000035283 Cyp2b9P12790 491 aa14.46□□□□□ -0.1
Nup88-201ENSMUST00000035283 Bmp2P21274 394 aa14.46□□□□□ -0.1
Nup88-201ENSMUST00000035283 GcP21614 476 aa14.46□□□□□ -0.1
Nup88-201ENSMUST00000035283 Cd68P31996 326 aa14.46□□□□□ -0.1
Nup88-201ENSMUST00000035283 Scp2P32020 547 aaKnown RBP14.46□□□□□ -0.1
Nup88-201ENSMUST00000035283 Q3TTJ4 293 aa14.46□□□□□ -0.1
Nup88-201ENSMUST00000035283 MaeaQ4VC33 396 aa14.46□□□□□ -0.1
Nup88-201ENSMUST00000035283 Cnot7Q60809 285 aa14.46□□□□□ -0.1
Nup88-201ENSMUST00000035283 Ppp2r5eQ61151 467 aa14.46□□□□□ -0.1
Nup88-201ENSMUST00000035283 GnptabQ69ZN6 1235 aa14.46□□□□□ -0.1
Nup88-201ENSMUST00000035283 Zswim5Q80TC6 1188 aa14.46□□□□□ -0.1
Nup88-201ENSMUST00000035283 Strip1Q8C079 837 aa14.46□□□□□ -0.1
Nup88-201ENSMUST00000035283 Depdc1aQ8CIG0 804 aa14.46□□□□□ -0.1
Nup88-201ENSMUST00000035283 HibchQ8QZS1 385 aa14.46□□□□□ -0.1
Nup88-201ENSMUST00000035283 ItpkaQ8R071 459 aa14.46□□□□□ -0.1
Nup88-201ENSMUST00000035283 NcaldQ91X97 193 aa14.46□□□□□ -0.1
Nup88-201ENSMUST00000035283 IkbipQ9DBZ1 373 aa14.46□□□□□ -0.1
Nup88-201ENSMUST00000035283 Syngap1F6SEU4 1340 aa14.46□□□□□ -0.1
Nup88-201ENSMUST00000035283 Scn9aQ62205 1984 aa14.45□□□□□ -0.1
Nup88-201ENSMUST00000035283 DohhA0A1Y7VJ29 135 aa14.45□□□□□ -0.1
Nup88-201ENSMUST00000035283 Lrrc38A2VDH3 298 aa14.45□□□□□ -0.1
Nup88-201ENSMUST00000035283 Cfap221A9Q751 836 aa14.45□□□□□ -0.1
Nup88-201ENSMUST00000035283 Parp2O88554 559 aa14.45□□□□□ -0.1
Nup88-201ENSMUST00000035283 Il13ra2O88786 383 aa14.45□□□□□ -0.1
Nup88-201ENSMUST00000035283 Dok7Q18PE0 504 aa14.45□□□□□ -0.1
Nup88-201ENSMUST00000035283 Tmem120bQ3TA38 339 aa14.45□□□□□ -0.1
Nup88-201ENSMUST00000035283 Dab2ipQ3UHC7 1189 aa14.45□□□□□ -0.1
Nup88-201ENSMUST00000035283 Zbtb7bQ64321 544 aa14.45□□□□□ -0.1
Nup88-201ENSMUST00000035283 Retreg2Q6NS82 541 aa14.45□□□□□ -0.1
Nup88-201ENSMUST00000035283 Rusc1Q8BG26 893 aa14.45□□□□□ -0.1
Nup88-201ENSMUST00000035283 Kat6bQ8BRB7 1872 aa14.45□□□□□ -0.1
Nup88-201ENSMUST00000035283 Naa25Q8BWZ3 972 aa14.45□□□□□ -0.1
Nup88-201ENSMUST00000035283 Tbc1d10cQ8C9V1 444 aa14.45□□□□□ -0.1
Nup88-201ENSMUST00000035283 CalcbQ99MP3 130 aa14.45□□□□□ -0.1
Nup88-201ENSMUST00000035283 Lman1Q9D0F3 517 aa14.45□□□□□ -0.1
Nup88-201ENSMUST00000035283 Q9DA42 136 aa14.45□□□□□ -0.1
Nup88-201ENSMUST00000035283 Nudt12Q9DCN1 462 aa14.45□□□□□ -0.1
Nup88-201ENSMUST00000035283 Cpb2Q9JHH6 422 aa14.45□□□□□ -0.1
Nup88-201ENSMUST00000035283 Azi2Q9QYP6 405 aa14.45□□□□□ -0.1
Nup88-201ENSMUST00000035283 Slfn8B1ARD8 910 aa14.44□□□□□ -0.1
Nup88-201ENSMUST00000035283 Gm4907B1AXB9 411 aa14.44□□□□□ -0.1
Nup88-201ENSMUST00000035283 Gm38392E9Q2A2 434 aa14.44□□□□□ -0.1
Nup88-201ENSMUST00000035283 Diaph2O70566 1098 aa14.44□□□□□ -0.1
Nup88-201ENSMUST00000035283 Pde8aO88502 823 aa14.44□□□□□ -0.1
Nup88-201ENSMUST00000035283 AaasP58742 546 aa14.44□□□□□ -0.1
Nup88-201ENSMUST00000035283 Fgfr4Q03142 799 aa14.44□□□□□ -0.1
Nup88-201ENSMUST00000035283 Siah1bQ06985 282 aa14.44□□□□□ -0.1
Nup88-201ENSMUST00000035283 YdjcQ14BV6 310 aa14.44□□□□□ -0.1
Nup88-201ENSMUST00000035283 Skap1Q3UUV5 355 aa14.44□□□□□ -0.1
Nup88-201ENSMUST00000035283 Swap70Q6A028 585 aaKnown RBP14.44□□□□□ -0.1
Nup88-201ENSMUST00000035283 Klhl36Q8R124 613 aa14.44□□□□□ -0.1
Nup88-201ENSMUST00000035283 Atxn7Q8R4I1 867 aa14.44□□□□□ -0.1
Nup88-201ENSMUST00000035283 Yipf1Q91VU1 306 aa14.44□□□□□ -0.1
Nup88-201ENSMUST00000035283 Igf2bp3Q9CPN8 579 aaKnown RBP14.44□□□□□ -0.1
Nup88-201ENSMUST00000035283 Cep83Q9D5R3 692 aa14.44□□□□□ -0.1
Nup88-201ENSMUST00000035283 Gtf2ird1Q9JI57 1104 aaKnown RBP14.44□□□□□ -0.1
Nup88-201ENSMUST00000035283 Klrc2Q9WTJ9 238 aa14.44□□□□□ -0.1
Nup88-201ENSMUST00000035283 Cyth3O08967 399 aa14.44□□□□□ -0.1
Nup88-201ENSMUST00000035283 Eif3dO70194 548 aaKnown RBP14.44□□□□□ -0.1
Nup88-201ENSMUST00000035283 Pik3r1P26450 724 aa14.44□□□□□ -0.1
Nup88-201ENSMUST00000035283 Miga1Q4QQM5 600 aa14.44□□□□□ -0.1
Retrieved 100 of 22,080 RNA–protein pairs in 44.2 ms