RNA–Protein interactions for RNA: ENSMUST00000022220.12

Msh3-201, Transcript of DNA mismatch repair protein Msh3, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Msh3, Length 3,937 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Msh3-201ENSMUST00000022220 Gm4297D3YWB7 211 aa11.66□□□□□ -0.54
Msh3-201ENSMUST00000022220 Apba3O88888 571 aa11.66□□□□□ -0.54
Msh3-201ENSMUST00000022220 Hcls1P49710 486 aaKnown RBP11.66□□□□□ -0.54
Msh3-201ENSMUST00000022220 Mark2Q05512 776 aa11.66□□□□□ -0.54
Msh3-201ENSMUST00000022220 GmncQ3URY2 333 aa11.66□□□□□ -0.54
Msh3-201ENSMUST00000022220 Lrig2Q52KR2 1054 aa11.66□□□□□ -0.54
Msh3-201ENSMUST00000022220 Xlr3bQ6P205 226 aa11.66□□□□□ -0.54
Msh3-201ENSMUST00000022220 Trim37Q6PCX9 961 aa11.66□□□□□ -0.54
Msh3-201ENSMUST00000022220 IrgqQ8VIM9 583 aa11.66□□□□□ -0.54
Msh3-201ENSMUST00000022220 Kremen1Q99N43 473 aa11.66□□□□□ -0.54
Msh3-201ENSMUST00000022220 Rbm31yQ9D3U4 565 aa11.66□□□□□ -0.54
Msh3-201ENSMUST00000022220 Eya4Q9Z191 616 aa11.66□□□□□ -0.54
Msh3-201ENSMUST00000022220 Gm6588E9Q3K0 461 aa11.66□□□□□ -0.54
Msh3-201ENSMUST00000022220 Mdm4O35618 489 aa11.66□□□□□ -0.54
Msh3-201ENSMUST00000022220 Lmnb2P21619 596 aaKnown RBP11.66□□□□□ -0.54
Msh3-201ENSMUST00000022220 Trmt1Q3TX08 663 aa11.66□□□□□ -0.54
Msh3-201ENSMUST00000022220 Rhox12Q4TU81 186 aa11.66□□□□□ -0.54
Msh3-201ENSMUST00000022220 Gm11437Q5QR91 290 aa11.66□□□□□ -0.54
Msh3-201ENSMUST00000022220 TbckQ8BM85 762 aa11.66□□□□□ -0.54
Msh3-201ENSMUST00000022220 YwhabQ9CQV8 246 aaKnown RBP11.66□□□□□ -0.54
Msh3-201ENSMUST00000022220 Ccdc97Q9DBT3 340 aa11.66□□□□□ -0.54
Msh3-201ENSMUST00000022220 Myo5bP21271 1818 aa11.66□□□□□ -0.54
Msh3-201ENSMUST00000022220 Nav1Q8CH77 1875 aa11.66□□□□□ -0.54
Msh3-201ENSMUST00000022220 Ulk4Q3V129 1303 aa11.66□□□□□ -0.54
Msh3-201ENSMUST00000022220 Rasal2E9PW37 1286 aa11.66□□□□□ -0.54
Msh3-201ENSMUST00000022220 Rfpl4bJ3QPR6 266 aa11.66□□□□□ -0.54
Msh3-201ENSMUST00000022220 Vcam1P29533 739 aa11.66□□□□□ -0.54
Msh3-201ENSMUST00000022220 Epha7Q61772 998 aa11.66□□□□□ -0.54
Msh3-201ENSMUST00000022220 Tbc1d22bQ80VE5 505 aa11.66□□□□□ -0.54
Msh3-201ENSMUST00000022220 Zmynd10Q99ML0 440 aa11.66□□□□□ -0.54
Msh3-201ENSMUST00000022220 Cox16Q9CR63 106 aa11.66□□□□□ -0.54
Msh3-201ENSMUST00000022220 Thap12Q9CUX1 758 aa11.66□□□□□ -0.54
Msh3-201ENSMUST00000022220 Atp6v1e2Q9D593 226 aa11.66□□□□□ -0.54
Msh3-201ENSMUST00000022220 4933406M09RikG3XA12 479 aa11.65□□□□□ -0.54
Msh3-201ENSMUST00000022220 Gm10436L7N1Y3 520 aa11.65□□□□□ -0.54
Msh3-201ENSMUST00000022220 Slc16a2O70324 545 aa11.65□□□□□ -0.54
Msh3-201ENSMUST00000022220 Tatdn3Q3U1C6 294 aa11.65□□□□□ -0.54
Msh3-201ENSMUST00000022220 Brd9Q3UQU0 596 aaKnown RBP11.65□□□□□ -0.54
Msh3-201ENSMUST00000022220 Sh3gl1Q62419 368 aa11.65□□□□□ -0.54
Msh3-201ENSMUST00000022220 Adck2Q6NSR3 617 aa11.65□□□□□ -0.54
Msh3-201ENSMUST00000022220 Cnksr2Q80YA9 1032 aa11.65□□□□□ -0.54
Msh3-201ENSMUST00000022220 Cfap36Q8C6E0 343 aa11.65□□□□□ -0.54
Msh3-201ENSMUST00000022220 Myef2Q8C854 591 aaKnown RBP11.65□□□□□ -0.54
Msh3-201ENSMUST00000022220 Parp10Q8CIE4 960 aa11.65□□□□□ -0.54
Msh3-201ENSMUST00000022220 HibchQ8QZS1 385 aa11.65□□□□□ -0.54
Msh3-201ENSMUST00000022220 YarsQ91WQ3 528 aaKnown RBP11.65□□□□□ -0.54
Msh3-201ENSMUST00000022220 Ranbp17Q99NF8 1088 aa11.65□□□□□ -0.54
Msh3-201ENSMUST00000022220 Drap1Q9D6N5 205 aa11.65□□□□□ -0.54
Msh3-201ENSMUST00000022220 Ccdc91Q9D8L5 442 aa11.65□□□□□ -0.54
Msh3-201ENSMUST00000022220 Extl2Q9ES89 330 aa11.65□□□□□ -0.54
Msh3-201ENSMUST00000022220 D830030K20RikE9PYQ5 218 aa11.65□□□□□ -0.54
Msh3-201ENSMUST00000022220 Gm3043K7N693 218 aa11.65□□□□□ -0.54
Msh3-201ENSMUST00000022220 Gm16440K7N6G6 218 aa11.65□□□□□ -0.54
Msh3-201ENSMUST00000022220 Gm6121L7MUF1 212 aa11.65□□□□□ -0.54
Msh3-201ENSMUST00000022220 Gm2244L7N2A3 218 aa11.65□□□□□ -0.54
Msh3-201ENSMUST00000022220 Gm3278L7N2D2 218 aa11.65□□□□□ -0.54
Msh3-201ENSMUST00000022220 Gm8271L7N2E2 218 aa11.65□□□□□ -0.54
Msh3-201ENSMUST00000022220 AurkbO70126 345 aa11.65□□□□□ -0.54
Msh3-201ENSMUST00000022220 Sesn2P58043 480 aa11.65□□□□□ -0.54
Msh3-201ENSMUST00000022220 Ccdc138Q0VF22 680 aa11.65□□□□□ -0.54
Msh3-201ENSMUST00000022220 Dzip1lQ499E4 774 aa11.65□□□□□ -0.54
Msh3-201ENSMUST00000022220 FktnQ8R507 461 aa11.65□□□□□ -0.54
Msh3-201ENSMUST00000022220 Cbwd1Q8VEH6 393 aa11.65□□□□□ -0.54
Msh3-201ENSMUST00000022220 Styxl1Q9DAR2 321 aa11.65□□□□□ -0.54
Msh3-201ENSMUST00000022220 Scyl1Q9EQC5 806 aaKnown RBP11.65□□□□□ -0.54
Msh3-201ENSMUST00000022220 Tacc3Q9JJ11 631 aa11.65□□□□□ -0.54
Msh3-201ENSMUST00000022220 Fmnl1Q9JL26 1094 aa11.65□□□□□ -0.54
Msh3-201ENSMUST00000022220 Extl3Q9WVL6 918 aa11.65□□□□□ -0.54
Msh3-201ENSMUST00000022220 Gm5114W4VSN8 858 aa11.65□□□□□ -0.54
Msh3-201ENSMUST00000022220 Alpk3Q924C5 1678 aa11.65□□□□□ -0.54
Msh3-201ENSMUST00000022220 Pdha1P35486 390 aaKnown RBP11.65□□□□□ -0.55
Msh3-201ENSMUST00000022220 Fermt1P59113 677 aa11.65□□□□□ -0.55
Msh3-201ENSMUST00000022220 Emc10Q3TAS6 258 aa11.65□□□□□ -0.55
Msh3-201ENSMUST00000022220 Gm3414Q3TNU4 584 aa11.65□□□□□ -0.55
Msh3-201ENSMUST00000022220 Ccdc92bQ5SUE3 299 aa11.65□□□□□ -0.55
Msh3-201ENSMUST00000022220 Atp13a4Q5XF90 1193 aa11.65□□□□□ -0.55
Msh3-201ENSMUST00000022220 Sema4bQ62179 823 aa11.65□□□□□ -0.55
Msh3-201ENSMUST00000022220 H6pdQ8CFX1 789 aa11.65□□□□□ -0.55
Msh3-201ENSMUST00000022220 Kiaa0391Q8JZY4 584 aaKnown RBP11.65□□□□□ -0.55
Msh3-201ENSMUST00000022220 Cpa5Q8R4H4 436 aa11.65□□□□□ -0.55
Msh3-201ENSMUST00000022220 Wrap53Q8VC51 532 aa11.65□□□□□ -0.55
Msh3-201ENSMUST00000022220 Tmod3Q9JHJ0 352 aa11.65□□□□□ -0.55
Msh3-201ENSMUST00000022220 Tjp3Q9QXY1 905 aa11.65□□□□□ -0.55
Msh3-201ENSMUST00000022220 Fxr2Q9WVR4 673 aaKnown RBP11.65□□□□□ -0.55
Msh3-201ENSMUST00000022220 Mmrn2A6H6E2 943 aa11.64□□□□□ -0.55
Msh3-201ENSMUST00000022220 Tmem165P52875 323 aa11.64□□□□□ -0.55
Msh3-201ENSMUST00000022220 Psmc5P62196 406 aa11.64□□□□□ -0.55
Msh3-201ENSMUST00000022220 Pla2g4eQ50L42 875 aa11.64□□□□□ -0.55
Msh3-201ENSMUST00000022220 Asap3Q5U464 904 aa11.64□□□□□ -0.55
Msh3-201ENSMUST00000022220 Thap3Q8BJ25 218 aa11.64□□□□□ -0.55
Msh3-201ENSMUST00000022220 Dtnbp1Q91WZ8 352 aa11.64□□□□□ -0.55
Msh3-201ENSMUST00000022220 Pcdhb2Q91Y00 799 aa11.64□□□□□ -0.55
Msh3-201ENSMUST00000022220 Rhobtb3Q9CTN4 611 aa11.64□□□□□ -0.55
Msh3-201ENSMUST00000022220 AticQ9CWJ9 592 aaKnown RBP11.64□□□□□ -0.55
Msh3-201ENSMUST00000022220 Mss51Q9D5Z5 446 aa11.64□□□□□ -0.55
Msh3-201ENSMUST00000022220 Zbtb12Q9Z150 459 aa11.64□□□□□ -0.55
Msh3-201ENSMUST00000022220 Phlpp1Q8CHE4 1687 aa11.64□□□□□ -0.55
Msh3-201ENSMUST00000022220 Pde8aO88502 823 aa11.64□□□□□ -0.55
Msh3-201ENSMUST00000022220 PrphP15331 475 aa11.64□□□□□ -0.55
Msh3-201ENSMUST00000022220 NsfP46460 744 aa11.64□□□□□ -0.55
Retrieved 100 of 22,080 RNA–protein pairs in 42.4 ms