RNA–Protein interactions for RNA: ENSMUST00000002708.4

Shh-201, Transcript of Sonic hedgehog protein, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Shh, Length 2,847 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Shh-201ENSMUST00000002708 Ythdf3Q8BYK6 585 aaKnown RBP17.73■□□□□ 0.43
Shh-201ENSMUST00000002708 Tmx4Q8C0L0 335 aa17.73■□□□□ 0.43
Shh-201ENSMUST00000002708 Btbd7Q8CFE5 1130 aa17.73■□□□□ 0.43
Shh-201ENSMUST00000002708 Gimap4Q99JY3 219 aa17.73■□□□□ 0.43
Shh-201ENSMUST00000002708 CalcbQ99MP3 130 aa17.73■□□□□ 0.43
Shh-201ENSMUST00000002708 Znf654Q9DAU9 571 aa17.73■□□□□ 0.43
Shh-201ENSMUST00000002708 Fthl17aQ9DAX0 182 aa17.73■□□□□ 0.43
Shh-201ENSMUST00000002708 Fam205a1D3YZF6 1314 aa17.73■□□□□ 0.43
Shh-201ENSMUST00000002708 Itgb4A2A863 1818 aa17.73■□□□□ 0.43
Shh-201ENSMUST00000002708 Slc35g2D3YVE8 412 aa17.73■□□□□ 0.43
Shh-201ENSMUST00000002708 Gm6121L7MUF1 212 aa17.73■□□□□ 0.43
Shh-201ENSMUST00000002708 AfpP02772 605 aa17.73■□□□□ 0.43
Shh-201ENSMUST00000002708 CtshP49935 333 aa17.73■□□□□ 0.43
Shh-201ENSMUST00000002708 Psmd1Q3TXS7 953 aa17.73■□□□□ 0.43
Shh-201ENSMUST00000002708 Drc1Q3USS3 753 aa17.73■□□□□ 0.43
Shh-201ENSMUST00000002708 Myo6Q64331 1265 aa17.73■□□□□ 0.43
Shh-201ENSMUST00000002708 Ints2Q80UK8 1198 aa17.73■□□□□ 0.43
Shh-201ENSMUST00000002708 Vps52Q8C754 723 aaKnown RBP17.73■□□□□ 0.43
Shh-201ENSMUST00000002708 PhykplQ8R1K4 467 aa17.73■□□□□ 0.43
Shh-201ENSMUST00000002708 Cpb1B2RS76 415 aa17.72■□□□□ 0.43
Shh-201ENSMUST00000002708 Cep126Q0VBV7 1103 aa17.72■□□□□ 0.43
Shh-201ENSMUST00000002708 Brd9Q3UQU0 596 aaKnown RBP17.72■□□□□ 0.43
Shh-201ENSMUST00000002708 ItgaeQ60677 1167 aa17.72■□□□□ 0.43
Shh-201ENSMUST00000002708 Ehbp1Q69ZW3 1231 aa17.72■□□□□ 0.43
Shh-201ENSMUST00000002708 Themis2Q91YX0 663 aa17.72■□□□□ 0.43
Shh-201ENSMUST00000002708 Pdxdc1Q99K01 787 aaKnown RBP17.72■□□□□ 0.43
Shh-201ENSMUST00000002708 Skor2A7M7C7 1008 aa17.72■□□□□ 0.43
Shh-201ENSMUST00000002708 Gm5814J3QP80 125 aa17.72■□□□□ 0.43
Shh-201ENSMUST00000002708 Mrfap1Q9CQL7 125 aa17.72■□□□□ 0.43
Shh-201ENSMUST00000002708 Mageb16Q9CWV4 363 aa17.72■□□□□ 0.43
Shh-201ENSMUST00000002708 Cse1lQ9ERK4 971 aaKnown RBP17.72■□□□□ 0.43
Shh-201ENSMUST00000002708 Cacna2d3Q9Z1L5 1091 aa17.72■□□□□ 0.43
Shh-201ENSMUST00000002708 Fam205aA2APU8 1308 aa17.71■□□□□ 0.43
Shh-201ENSMUST00000002708 Prss51A0A286YDY8 319 aa17.71■□□□□ 0.43
Shh-201ENSMUST00000002708 1700018F24RikB2RW27 314 aa17.71■□□□□ 0.43
Shh-201ENSMUST00000002708 Slc16a2O70324 545 aa17.71■□□□□ 0.43
Shh-201ENSMUST00000002708 Rrp36Q3UFY0 244 aaKnown RBP17.71■□□□□ 0.43
Shh-201ENSMUST00000002708 Ttf2Q5NC05 1138 aa17.71■□□□□ 0.43
Shh-201ENSMUST00000002708 Ugt1a9Q62452 528 aa17.71■□□□□ 0.43
Shh-201ENSMUST00000002708 Psmd5Q8BJY1 504 aa17.71■□□□□ 0.43
Shh-201ENSMUST00000002708 Kcnv2Q8CFS6 562 aa17.71■□□□□ 0.43
Shh-201ENSMUST00000002708 MyripQ8K3I4 856 aa17.71■□□□□ 0.43
Shh-201ENSMUST00000002708 Gpsm2Q8VDU0 679 aa17.71■□□□□ 0.43
Shh-201ENSMUST00000002708 Atp6v1e2Q9D593 226 aa17.71■□□□□ 0.43
Shh-201ENSMUST00000002708 Gm45194A0A140LJG2 572 aa17.71■□□□□ 0.43
Shh-201ENSMUST00000002708 Dlg4Q62108 724 aa17.71■□□□□ 0.43
Shh-201ENSMUST00000002708 CbarpQ66L44 698 aa17.71■□□□□ 0.43
Shh-201ENSMUST00000002708 Ttyh3Q6P5F7 524 aa17.71■□□□□ 0.43
Shh-201ENSMUST00000002708 Ssxb10Q6XAR7 170 aa17.71■□□□□ 0.43
Shh-201ENSMUST00000002708 Gprasp2Q8BUY8 826 aa17.71■□□□□ 0.43
Shh-201ENSMUST00000002708 Cd248Q91V98 765 aa17.71■□□□□ 0.43
Shh-201ENSMUST00000002708 Ergic2Q9CR89 377 aa17.71■□□□□ 0.43
Shh-201ENSMUST00000002708 Ctnnbl1Q9CWL8 563 aaKnown RBP17.71■□□□□ 0.43
Shh-201ENSMUST00000002708 Nfs1Q9Z1J3 459 aa17.71■□□□□ 0.43
Shh-201ENSMUST00000002708 Adamtsl1Q8BLI0 1745 aa17.71■□□□□ 0.43
Shh-201ENSMUST00000002708 March10E9PX79 788 aa17.71■□□□□ 0.42
Shh-201ENSMUST00000002708 Ephb4P54761 987 aa17.71■□□□□ 0.42
Shh-201ENSMUST00000002708 Znf583Q3V080 568 aa17.71■□□□□ 0.42
Shh-201ENSMUST00000002708 E2f7Q6S7F2 904 aa17.71■□□□□ 0.42
Shh-201ENSMUST00000002708 Cnot10Q8BH15 744 aa17.71■□□□□ 0.42
Shh-201ENSMUST00000002708 PpatQ8CIH9 517 aa17.71■□□□□ 0.42
Shh-201ENSMUST00000002708 Pcdhgb4Q91XX6 912 aa17.71■□□□□ 0.42
Shh-201ENSMUST00000002708 Ttc5Q99LG4 440 aa17.71■□□□□ 0.42
Shh-201ENSMUST00000002708 Spc24Q9D083 201 aa17.71■□□□□ 0.42
Shh-201ENSMUST00000002708 Hebp1Q9R257 190 aa17.71■□□□□ 0.42
Shh-201ENSMUST00000002708 MyocO70624 490 aa17.7■□□□□ 0.42
Shh-201ENSMUST00000002708 Mgat1P27808 447 aa17.7■□□□□ 0.42
Shh-201ENSMUST00000002708 Lrrn4P59383 733 aa17.7■□□□□ 0.42
Shh-201ENSMUST00000002708 Ndufaf2Q59J78 168 aa17.7■□□□□ 0.42
Shh-201ENSMUST00000002708 Tfe3Q64092 572 aaKnown RBP17.7■□□□□ 0.42
Shh-201ENSMUST00000002708 Zbtb7bQ64321 544 aa17.7■□□□□ 0.42
Shh-201ENSMUST00000002708 Senp6Q6P7W0 1132 aa17.7■□□□□ 0.42
Shh-201ENSMUST00000002708 Kirrel3Q8BR86 778 aa17.7■□□□□ 0.42
Shh-201ENSMUST00000002708 Usp20Q8C6M1 916 aa17.7■□□□□ 0.42
Shh-201ENSMUST00000002708 Kat5Q8CHK4 513 aa17.7■□□□□ 0.42
Shh-201ENSMUST00000002708 Cyp2d26Q8CIM7 500 aa17.7■□□□□ 0.42
Shh-201ENSMUST00000002708 Xpo6Q924Z6 1125 aa17.7■□□□□ 0.42
Shh-201ENSMUST00000002708 Cntnap2Q9CPW0 1332 aa17.7■□□□□ 0.42
Shh-201ENSMUST00000002708 Gm14525B1AZA0 212 aa17.7■□□□□ 0.42
Shh-201ENSMUST00000002708 Gm2012B1B0R1 212 aa17.7■□□□□ 0.42
Shh-201ENSMUST00000002708 Heatr4E9Q357 955 aa17.7■□□□□ 0.42
Shh-201ENSMUST00000002708 Tp53P02340 387 aa17.7■□□□□ 0.42
Shh-201ENSMUST00000002708 Pon1P52430 355 aa17.7■□□□□ 0.42
Shh-201ENSMUST00000002708 NfibP97863 570 aaKnown RBP17.7■□□□□ 0.42
Shh-201ENSMUST00000002708 Vwa3aQ3UVV9 1148 aa17.7■□□□□ 0.42
Shh-201ENSMUST00000002708 HnrnpdQ60668 355 aaKnown RBP17.7■□□□□ 0.42
Shh-201ENSMUST00000002708 Gm14819Q62478 212 aa17.7■□□□□ 0.42
Shh-201ENSMUST00000002708 Tas2r134Q7TQB0 298 aa17.7■□□□□ 0.42
Shh-201ENSMUST00000002708 Rnaseh2bQ80ZV0 308 aa17.7■□□□□ 0.42
Shh-201ENSMUST00000002708 Gm5622Q810Q0 167 aa17.7■□□□□ 0.42
Shh-201ENSMUST00000002708 Slc18a1Q8R090 521 aa17.7■□□□□ 0.42
Shh-201ENSMUST00000002708 Defb15Q8R2I5 79 aa17.7■□□□□ 0.42
Shh-201ENSMUST00000002708 Gm2030D3Z7C4 212 aa17.69■□□□□ 0.42
Shh-201ENSMUST00000002708 Olfr247E9PVJ7 320 aa17.69■□□□□ 0.42
Shh-201ENSMUST00000002708 Olfr819K7N727 320 aa17.69■□□□□ 0.42
Shh-201ENSMUST00000002708 PtenO08586 403 aa17.69■□□□□ 0.42
Shh-201ENSMUST00000002708 Barx2O08686 283 aa17.69■□□□□ 0.42
Shh-201ENSMUST00000002708 Ccdc92bQ5SUE3 299 aa17.69■□□□□ 0.42
Shh-201ENSMUST00000002708 Stxbp2Q64324 593 aa17.69■□□□□ 0.42
Shh-201ENSMUST00000002708 Fbxo38Q8BMI0 1194 aa17.69■□□□□ 0.42
Retrieved 100 of 22,080 RNA–protein pairs in 36.4 ms