RNA–Protein interactions for RNA: YNL189W

SRP1, Transcript of Karyopherin alpha homolog, yeastyeast

Gene SRP1, Length 1,629 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SRP1YNL189W ASP3-2P0CX77 362 aa2.5□□□□□ -2.01
SRP1YNL189W ASP3-3P0CX78 362 aa2.5□□□□□ -2.01
SRP1YNL189W ASP3-4P0CX79 362 aa2.5□□□□□ -2.01
SRP1YNL189W ASP3-1P0CZ17 362 aa2.5□□□□□ -2.01
SRP1YNL189W URA10P30402 227 aa2.5□□□□□ -2.01
SRP1YNL189W CAB5Q03941 241 aa2.5□□□□□ -2.01
SRP1YNL189W API2Q04413 109 aa2.5□□□□□ -2.01
SRP1YNL189W MMT2Q08970 484 aa2.5□□□□□ -2.01
SRP1YNL189W FAB1P34756 2278 aa2.5□□□□□ -2.01
SRP1YNL189W CDC37P06101 506 aaKnown RBP2.5□□□□□ -2.01
SRP1YNL189W BGL2P15703 313 aaKnown RBP2.5□□□□□ -2.01
SRP1YNL189W EPT1P22140 391 aa2.5□□□□□ -2.01
SRP1YNL189W MID2P36027 376 aa2.5□□□□□ -2.01
SRP1YNL189W MRPS9P38120 278 aa2.5□□□□□ -2.01
SRP1YNL189W PCH2P38126 564 aa2.5□□□□□ -2.01
SRP1YNL189W SWC5P38326 303 aa2.5□□□□□ -2.01
SRP1YNL189W RNY1Q02933 434 aaKnown RBP2.5□□□□□ -2.01
SRP1YNL189W YOL029CQ08187 201 aa2.5□□□□□ -2.01
SRP1YNL189W YPQ1Q12010 308 aa2.5□□□□□ -2.01
SRP1YNL189W PAA1Q12447 191 aaKnown RBP2.5□□□□□ -2.01
SRP1YNL189W YBL111CQ3E7Y5 667 aa2.5□□□□□ -2.01
SRP1YNL189W YAL067W-AQ8TGK6 75 aa2.5□□□□□ -2.01
SRP1YNL189W CCH1P50077 2039 aa2.49□□□□□ -2.01
SRP1YNL189W TPI1P00942 248 aaKnown RBP2.49□□□□□ -2.01
SRP1YNL189W CBP2P03874 630 aaPredicted RBP2.49□□□□□ -2.01
SRP1YNL189W VMA5P31412 392 aaKnown RBP2.49□□□□□ -2.01
SRP1YNL189W BUD2P33314 1104 aa2.49□□□□□ -2.01
SRP1YNL189W SHE3P38272 425 aaKnown RBP2.49□□□□□ -2.01
SRP1YNL189W YDR089WP38966 869 aa2.49□□□□□ -2.01
SRP1YNL189W END3P39013 349 aa2.49□□□□□ -2.01
SRP1YNL189W PES4P39684 611 aa2.49□□□□□ -2.01
SRP1YNL189W YFR018CP43599 363 aa2.49□□□□□ -2.01
SRP1YNL189W HCH1P53834 153 aa2.49□□□□□ -2.01
SRP1YNL189W FAR10Q06001 478 aa2.49□□□□□ -2.01
SRP1YNL189W CUR1Q06469 252 aa2.49□□□□□ -2.01
SRP1YNL189W MIM1Q08176 113 aa2.49□□□□□ -2.01
SRP1YNL189W RTC5Q12108 567 aaKnown RBP2.49□□□□□ -2.01
SRP1YNL189W FLO11P08640 1367 aa2.48□□□□□ -2.01
SRP1YNL189W DBP7P36120 742 aaKnown RBP2.48□□□□□ -2.01
SRP1YNL189W TAE1P38340 232 aa2.48□□□□□ -2.01
SRP1YNL189W GGC1P38988 300 aa2.48□□□□□ -2.01
SRP1YNL189W FET3P38993 636 aa2.48□□□□□ -2.01
SRP1YNL189W SSO2P39926 295 aa2.48□□□□□ -2.01
SRP1YNL189W YFL040WP43562 540 aa2.48□□□□□ -2.01
SRP1YNL189W NRM1P53718 249 aa2.48□□□□□ -2.01
SRP1YNL189W RVB1Q03940 463 aaKnown RBP2.48□□□□□ -2.01
SRP1YNL189W MGR3Q04472 501 aa2.48□□□□□ -2.01
SRP1YNL189W YDR018CQ12185 396 aa2.48□□□□□ -2.01
SRP1YNL189W SPS19P32573 292 aaKnown RBP2.47□□□□□ -2.01
SRP1YNL189W CYM1P32898 989 aa2.47□□□□□ -2.01
SRP1YNL189W RIB4P50861 169 aaPredicted RBP2.47□□□□□ -2.01
SRP1YNL189W DBP6P53734 629 aaKnown RBP2.47□□□□□ -2.01
SRP1YNL189W YMR244WQ04018 355 aa2.47□□□□□ -2.01
SRP1YNL189W MDY2Q12285 212 aa2.47□□□□□ -2.01
SRP1YNL189W LDB17Q12342 491 aa2.47□□□□□ -2.01
SRP1YNL189W MHP1P43638 1398 aa2.47□□□□□ -2.01
SRP1YNL189W CBF5P33322 483 aaKnown RBP RIP-Chip data2.46□□□□□ -2.02not detected
SRP1YNL189W YKL071WP36086 256 aa2.46□□□□□ -2.02
SRP1YNL189W RCK1P38622 512 aa2.46□□□□□ -2.02
SRP1YNL189W ECM34P38728 170 aa2.46□□□□□ -2.02
SRP1YNL189W PET8P38921 284 aa2.46□□□□□ -2.02
SRP1YNL189W YER184CP39961 794 aa2.46□□□□□ -2.02
SRP1YNL189W YFL012WP43580 148 aa2.46□□□□□ -2.02
SRP1YNL189W YLR297WQ05899 129 aa2.46□□□□□ -2.02
SRP1YNL189W RDL2Q08742 149 aaKnown RBP2.46□□□□□ -2.02
SRP1YNL189W RBK1P25332 333 aa2.46□□□□□ -2.02
SRP1YNL189W MEI5P32489 222 aa2.46□□□□□ -2.02
SRP1YNL189W TIP20P33891 701 aa2.46□□□□□ -2.02
SRP1YNL189W UTP25P40498 721 aaKnown RBP2.46□□□□□ -2.02
SRP1YNL189W INA22P40576 216 aa2.46□□□□□ -2.02
SRP1YNL189W FLC3P53121 802 aa2.46□□□□□ -2.02
SRP1YNL189W SED5Q01590 340 aa2.46□□□□□ -2.02
SRP1YNL189W YPL080CQ02826 108 aa2.46□□□□□ -2.02
SRP1YNL189W INP1Q03694 420 aa2.46□□□□□ -2.02
SRP1YNL189W ECM11Q04110 302 aa2.46□□□□□ -2.02
SRP1YNL189W PET18P25362 215 aa2.45□□□□□ -2.02
SRP1YNL189W KTI12P34253 313 aaKnown RBP2.45□□□□□ -2.02
SRP1YNL189W DSE1P40077 573 aa2.45□□□□□ -2.02
SRP1YNL189W RPN8Q08723 338 aaKnown RBP2.45□□□□□ -2.02
SRP1YNL189W AUS1Q08409 1394 aa2.44□□□□□ -2.02
SRP1YNL189W STE2D6VTK4 431 aa2.44□□□□□ -2.02
SRP1YNL189W RPS19AP07280 144 aaKnown RBP2.44□□□□□ -2.02
SRP1YNL189W RPS19BP07281 144 aaPredicted RBP2.44□□□□□ -2.02
SRP1YNL189W CAR2P07991 424 aaKnown RBP2.44□□□□□ -2.02
SRP1YNL189W COX10P21592 462 aa2.44□□□□□ -2.02
SRP1YNL189W ITR2P30606 609 aa2.44□□□□□ -2.02
SRP1YNL189W ACB1P31787 87 aa2.44□□□□□ -2.02
SRP1YNL189W RAD23P32628 398 aaKnown RBP2.44□□□□□ -2.02
SRP1YNL189W MNN9P39107 395 aaKnown RBP2.44□□□□□ -2.02
SRP1YNL189W PMT4P46971 762 aa2.44□□□□□ -2.02
SRP1YNL189W YGR067CP53243 804 aa2.44□□□□□ -2.02
SRP1YNL189W MRX9Q07349 420 aaKnown RBP2.44□□□□□ -2.02
SRP1YNL189W PBP4Q07362 185 aaKnown RBP2.44□□□□□ -2.02
SRP1YNL189W YLR012CQ07927 99 aa2.44□□□□□ -2.02
SRP1YNL189W SAM4Q08985 325 aaKnown RBP2.44□□□□□ -2.02
SRP1YNL189W APC2Q12440 853 aa2.44□□□□□ -2.02
SRP1YNL189W CTA1P15202 515 aa2.43□□□□□ -2.02
SRP1YNL189W YBR062CP38239 180 aa2.43□□□□□ -2.02
SRP1YNL189W COQ5P49017 307 aa2.43□□□□□ -2.02
SRP1YNL189W FMP48P53233 369 aa2.43□□□□□ -2.02
Retrieved 100 of 5,963 RNA–protein pairs in 16.2 ms