RNA–Protein interactions for RNA: YMR304W

UBP15, Transcript of Ubiquitin-specific protease involved in protein deubiquitination, yeastyeast

Gene UBP15, Length 3,693 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBP15YMR304W YGR026WP53217 278 aa2.25□□□□□ -2.05
UBP15YMR304W RTT102P53330 157 aa2.25□□□□□ -2.05
UBP15YMR304W ACT1P60010 375 aaKnown RBP2.25□□□□□ -2.05
UBP15YMR304W YMR315WQ04869 349 aaKnown RBP2.25□□□□□ -2.05
UBP15YMR304W ARP9Q05123 467 aa2.25□□□□□ -2.05
UBP15YMR304W YLR283WQ05867 314 aa2.25□□□□□ -2.05
UBP15YMR304W PIN3Q06449 215 aa2.25□□□□□ -2.05
UBP15YMR304W PKH2Q12236 1081 aaKnown RBP2.25□□□□□ -2.05
UBP15YMR304W ZRT2Q12436 422 aa2.25□□□□□ -2.05
UBP15YMR304W CMR1Q12510 522 aaKnown RBP2.25□□□□□ -2.05
UBP15YMR304W SLO1Q3E784 85 aa2.25□□□□□ -2.05
UBP15YMR304W YCL001W-BQ96VH2 84 aa2.25□□□□□ -2.05
UBP15YMR304W VCX1Q99385 411 aa2.25□□□□□ -2.05
UBP15YMR304W CYC1P00044 109 aaPredicted RBP2.24□□□□□ -2.05
UBP15YMR304W ADH2P00331 348 aaKnown RBP2.24□□□□□ -2.05
UBP15YMR304W MES1P00958 751 aaKnown RBP2.24□□□□□ -2.05
UBP15YMR304W RPL9AP05738 191 aaKnown RBP2.24□□□□□ -2.05
UBP15YMR304W HTS1P07263 546 aaKnown RBP2.24□□□□□ -2.05
UBP15YMR304W SGA1P08019 549 aa2.24□□□□□ -2.05
UBP15YMR304W SPS2P08459 502 aa2.24□□□□□ -2.05
UBP15YMR304W URA6P15700 204 aa2.24□□□□□ -2.05
UBP15YMR304W MRPL44P19956 98 aa2.24□□□□□ -2.05
UBP15YMR304W SRB5P32585 307 aa2.24□□□□□ -2.05
UBP15YMR304W MRPL15P36523 253 aa2.24□□□□□ -2.05
UBP15YMR304W TCM62P38228 572 aaKnown RBP2.24□□□□□ -2.05
UBP15YMR304W HIS2P38635 335 aa2.24□□□□□ -2.05
UBP15YMR304W MND2P40577 368 aa2.24□□□□□ -2.05
UBP15YMR304W AIM22P47051 409 aa2.24□□□□□ -2.05
UBP15YMR304W GCV1P48015 400 aa2.24□□□□□ -2.05
UBP15YMR304W PAC10P48363 199 aa2.24□□□□□ -2.05
UBP15YMR304W APT1P49435 187 aaKnown RBP2.24□□□□□ -2.05
UBP15YMR304W RPL9BP51401 191 aaKnown RBP2.24□□□□□ -2.05
UBP15YMR304W SPC98P53540 846 aa2.24□□□□□ -2.05
UBP15YMR304W NRM1P53718 249 aa2.24□□□□□ -2.05
UBP15YMR304W MRPL22P53881 309 aa2.24□□□□□ -2.05
UBP15YMR304W SLM2P53955 656 aa2.24□□□□□ -2.05
UBP15YMR304W UTP5Q04177 643 aaKnown RBP2.24□□□□□ -2.05
UBP15YMR304W ERP1Q05359 219 aaKnown RBP2.24□□□□□ -2.05
UBP15YMR304W UPS1Q05776 175 aa2.24□□□□□ -2.05
UBP15YMR304W DIA2Q08496 732 aaPredicted RBP2.24□□□□□ -2.05
UBP15YMR304W SYC1Q08553 188 aaPredicted RBP2.24□□□□□ -2.05
UBP15YMR304W YLR049CQ12110 428 aa2.24□□□□□ -2.05
UBP15YMR304W RAX2Q12465 1220 aa2.24□□□□□ -2.05
UBP15YMR304W LDS1P31379 325 aa2.24□□□□□ -2.05
UBP15YMR304W HXT4P32467 576 aa2.24□□□□□ -2.05
UBP15YMR304W RPT5P33297 434 aaKnown RBP2.24□□□□□ -2.05
UBP15YMR304W FMP46P36141 133 aaKnown RBP2.24□□□□□ -2.05
UBP15YMR304W GIP4P39732 760 aa2.24□□□□□ -2.05
UBP15YMR304W POP1P41812 875 aa2.24□□□□□ -2.05
UBP15YMR304W TFG2P41896 400 aaPredicted RBP2.24□□□□□ -2.05
UBP15YMR304W RMD8P43620 662 aa2.24□□□□□ -2.05
UBP15YMR304W YJR030CP47101 745 aa2.24□□□□□ -2.05
UBP15YMR304W DUO1P53168 247 aaKnown RBP2.24□□□□□ -2.05
UBP15YMR304W YGR017WP53210 297 aa2.24□□□□□ -2.05
UBP15YMR304W GND2P53319 492 aa2.24□□□□□ -2.05
UBP15YMR304W MEP3P53390 489 aa2.24□□□□□ -2.05
UBP15YMR304W IBD2P53892 351 aa2.24□□□□□ -2.05
UBP15YMR304W TIM44Q01852 431 aa2.24□□□□□ -2.05
UBP15YMR304W DIG1Q03063 452 aaKnown RBP2.24□□□□□ -2.05
UBP15YMR304W HRD3Q05787 833 aa2.24□□□□□ -2.05
UBP15YMR304W UTP21Q06078 939 aaPredicted RBP2.24□□□□□ -2.05
UBP15YMR304W YLR446WQ06204 433 aa2.24□□□□□ -2.05
UBP15YMR304W IPK1Q06667 281 aa2.24□□□□□ -2.05
UBP15YMR304W YLR413WQ06689 675 aa2.24□□□□□ -2.05
UBP15YMR304W SDO1Q07953 250 aaKnown RBP2.24□□□□□ -2.05
UBP15YMR304W YOR365CQ08844 703 aa2.24□□□□□ -2.05
UBP15YMR304W TCO89Q08921 799 aa2.24□□□□□ -2.05
UBP15YMR304W ORT1Q12375 292 aa2.24□□□□□ -2.05
UBP15YMR304W MRX4Q12467 430 aa2.24□□□□□ -2.05
UBP15YMR304W COX4P04037 155 aa2.24□□□□□ -2.05
UBP15YMR304W GAL10P04397 699 aa2.24□□□□□ -2.05
UBP15YMR304W SST2P11972 698 aaKnown RBP2.24□□□□□ -2.05
UBP15YMR304W TCP1P12612 559 aaKnown RBP2.24□□□□□ -2.05
UBP15YMR304W ERD2P18414 219 aa2.24□□□□□ -2.05
UBP15YMR304W KIN3P22209 435 aa2.24□□□□□ -2.05
UBP15YMR304W NFS1P25374 497 aa2.24□□□□□ -2.05
UBP15YMR304W NPL6P32832 435 aa2.24□□□□□ -2.05
UBP15YMR304W YKL077WP36081 392 aa2.24□□□□□ -2.05
UBP15YMR304W YCR087C-AP37263 153 aa2.24□□□□□ -2.05
UBP15YMR304W RIB5P38145 238 aa2.24□□□□□ -2.05
UBP15YMR304W AME1P38313 324 aa2.24□□□□□ -2.05
UBP15YMR304W BIG1P38813 335 aa2.24□□□□□ -2.05
UBP15YMR304W TPA1P40032 644 aaKnown RBP2.24□□□□□ -2.05
UBP15YMR304W IRC8P47046 822 aa2.24□□□□□ -2.05
UBP15YMR304W NUP57P48837 541 aa2.24□□□□□ -2.05
UBP15YMR304W YNL092WP53934 400 aa2.24□□□□□ -2.05
UBP15YMR304W AIM36Q03798 255 aa2.24□□□□□ -2.05
UBP15YMR304W GIS1Q03833 894 aa2.24□□□□□ -2.05
UBP15YMR304W DIC1Q06143 298 aa2.24□□□□□ -2.05
UBP15YMR304W BCP1Q06338 283 aa2.24□□□□□ -2.05
UBP15YMR304W CTR3Q06686 241 aa2.24□□□□□ -2.05
UBP15YMR304W HRK1Q08732 759 aaKnown RBP2.24□□□□□ -2.05
UBP15YMR304W GPB1Q08886 897 aa2.24□□□□□ -2.05
UBP15YMR304W RUP1Q12242 671 aa2.24□□□□□ -2.05
UBP15YMR304W TPO4Q12256 659 aa2.24□□□□□ -2.05
UBP15YMR304W ATG5Q12380 294 aa2.24□□□□□ -2.05
UBP15YMR304W YDL199CQ12407 687 aa2.24□□□□□ -2.05
UBP15YMR304W YPR145C-AQ2V2P0 78 aa2.24□□□□□ -2.05
UBP15YMR304W VMA9Q3E7B6 73 aa2.24□□□□□ -2.05
UBP15YMR304W YBR298C-AQ8TGK4 73 aa2.24□□□□□ -2.05
Retrieved 100 of 5,963 RNA–protein pairs in 9.9 ms