RNA–Protein interactions for RNA: YHR056C

RSC30, Transcript of Component of the RSC chromatin remodeling complex, yeast

Gene RSC30, Length 2,652 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RSC30	YHR056C	SNC1	P31109	117 aa		4.81	□□□□□ -1.64
RSC30	YHR056C	VMA11	P32842	164 aa		4.81	□□□□□ -1.64
RSC30	YHR056C	COS9	P36034	407 aa		4.81	□□□□□ -1.64
RSC30	YHR056C	TSC10	P38342	320 aa		4.81	□□□□□ -1.64
RSC30	YHR056C	BIG1	P38813	335 aa		4.81	□□□□□ -1.64
RSC30	YHR056C	SHU2	P38957	223 aa		4.81	□□□□□ -1.64
RSC30	YHR056C	YIL166C	P40445	542 aa		4.81	□□□□□ -1.64
RSC30	YHR056C	GLR1	P41921	483 aa	Known RBP	4.81	□□□□□ -1.64
RSC30	YHR056C	APM1	Q00776	475 aa	Predicted RBP	4.81	□□□□□ -1.64
RSC30	YHR056C	YPL108W	Q02872	168 aa	Predicted RBP	4.81	□□□□□ -1.64
RSC30	YHR056C	RRT8	Q08219	342 aa		4.81	□□□□□ -1.64
RSC30	YHR056C	SNF8	Q12483	233 aa		4.81	□□□□□ -1.64
RSC30	YHR056C	SEC12	P11655	471 aa		4.8	□□□□□ -1.64
RSC30	YHR056C	YNL208W	P40159	199 aa	Known RBP	4.8	□□□□□ -1.64
RSC30	YHR056C	CCT7	P42943	550 aa	Known RBP	4.8	□□□□□ -1.64
RSC30	YHR056C	LYS5	P50113	272 aa		4.8	□□□□□ -1.64
RSC30	YHR056C	YGL235W	P53071	178 aa		4.8	□□□□□ -1.64
RSC30	YHR056C	YHC1	Q05900	231 aa	Known RBP	4.8	□□□□□ -1.64
RSC30	YHR056C	YPR127W	Q06494	345 aa		4.8	□□□□□ -1.64
RSC30	YHR056C	YPR196W	Q06595	470 aa		4.8	□□□□□ -1.64
RSC30	YHR056C	RPN6	Q12377	434 aa		4.8	□□□□□ -1.64
RSC30	YHR056C	ILV5	P06168	395 aa	Known RBP	4.8	□□□□□ -1.64
RSC30	YHR056C	MER1	P16523	270 aa		4.8	□□□□□ -1.64
RSC30	YHR056C	ERD2	P18414	219 aa		4.8	□□□□□ -1.64
RSC30	YHR056C	POL4	P25615	582 aa		4.8	□□□□□ -1.64
RSC30	YHR056C	HSP30	P25619	332 aa		4.8	□□□□□ -1.64
RSC30	YHR056C	ECM15	P35195	104 aa		4.8	□□□□□ -1.64
RSC30	YHR056C	YBR138C	P38277	524 aa		4.8	□□□□□ -1.64
RSC30	YHR056C	YHR097C	P38809	366 aa	Known RBP	4.8	□□□□□ -1.64
RSC30	YHR056C	GDI1	P39958	451 aa	Known RBP	4.8	□□□□□ -1.64
RSC30	YHR056C	IDS2	P46958	469 aa		4.8	□□□□□ -1.64
RSC30	YHR056C	YPR097W	Q06839	1073 aa		4.8	□□□□□ -1.64
RSC30	YHR056C	GAT3	Q07928	141 aa		4.8	□□□□□ -1.64
RSC30	YHR056C	YKL018C-A	Q3E7A7	99 aa		4.8	□□□□□ -1.64
RSC30	YHR056C	HTA1	P04911	132 aa	Known RBP	4.79	□□□□□ -1.64
RSC30	YHR056C	YAK1	P14680	807 aa		4.79	□□□□□ -1.64
RSC30	YHR056C	PHO81	P17442	1178 aa		4.79	□□□□□ -1.64
RSC30	YHR056C	PRE2	P30656	287 aa	Known RBP	4.79	□□□□□ -1.64
RSC30	YHR056C	MRPL16	P38064	232 aa		4.79	□□□□□ -1.64
RSC30	YHR056C	YBL029W	P38201	376 aa		4.79	□□□□□ -1.64
RSC30	YHR056C	SGN1	P40561	250 aa	Known RBP RIP-Chip data	4.79	□□□□□ -1.64	not detected
RSC30	YHR056C	IMA5	P40884	581 aa		4.79	□□□□□ -1.64
RSC30	YHR056C	DPB11	P47027	764 aa	Predicted RBP	4.79	□□□□□ -1.64
RSC30	YHR056C	UBC13	P52490	153 aa		4.79	□□□□□ -1.64
RSC30	YHR056C	CIK1	Q01649	594 aa		4.79	□□□□□ -1.64
RSC30	YHR056C	TFB3	Q03290	321 aa		4.79	□□□□□ -1.64
RSC30	YHR056C	FIT3	Q08907	204 aa		4.79	□□□□□ -1.64
RSC30	YHR056C	YIG1	Q08956	461 aa		4.79	□□□□□ -1.64
RSC30	YHR056C	YHR214C-E	Q8TGK0	99 aa		4.79	□□□□□ -1.64
RSC30	YHR056C	URA2	P07259	2214 aa	Known RBP	4.79	□□□□□ -1.64
RSC30	YHR056C	ARP2	P32381	391 aa	Known RBP	4.79	□□□□□ -1.64
RSC30	YHR056C	TOA1	P32773	286 aa		4.79	□□□□□ -1.64
RSC30	YHR056C	SWH1	P35845	1188 aa		4.79	□□□□□ -1.64
RSC30	YHR056C	JEN1	P36035	616 aa		4.79	□□□□□ -1.64
RSC30	YHR056C	YGR201C	P42936	225 aa		4.79	□□□□□ -1.64
RSC30	YHR056C	SUT1	P53032	299 aa	Known RBP	4.79	□□□□□ -1.64
RSC30	YHR056C	YMR279C	Q03263	540 aa		4.79	□□□□□ -1.64
RSC30	YHR056C	YMR010W	Q03687	405 aa		4.79	□□□□□ -1.64
RSC30	YHR056C	ULA1	Q12059	462 aa		4.79	□□□□□ -1.64
RSC30	YHR056C	SUA7	P29055	345 aa	Predicted RBP	4.79	□□□□□ -1.64
RSC30	YHR056C	YNK1	P36010	153 aa	Known RBP	4.79	□□□□□ -1.64
RSC30	YHR056C	YKL071W	P36086	256 aa		4.79	□□□□□ -1.64
RSC30	YHR056C	ECM34	P38728	170 aa		4.79	□□□□□ -1.64
RSC30	YHR056C	MLH1	P38920	769 aa		4.79	□□□□□ -1.64
RSC30	YHR056C	GZF3	P42944	551 aa	Known RBP	4.79	□□□□□ -1.64
RSC30	YHR056C	CTL1	Q03220	320 aa	Known RBP	4.79	□□□□□ -1.64
RSC30	YHR056C	PRP11	Q07350	266 aa	Predicted RBP	4.79	□□□□□ -1.64
RSC30	YHR056C	YOL163W	P0CF20	169 aa		4.78	□□□□□ -1.64
RSC30	YHR056C	NIC96	P34077	839 aa		4.78	□□□□□ -1.64
RSC30	YHR056C	GPI18	P38211	433 aa		4.78	□□□□□ -1.64
RSC30	YHR056C	COG2	P53271	262 aa		4.78	□□□□□ -1.64
RSC30	YHR056C	GTB1	Q04924	702 aa		4.78	□□□□□ -1.64
RSC30	YHR056C	SIA1	Q12212	622 aa		4.78	□□□□□ -1.64
RSC30	YHR056C	KRE29	P40026	464 aa		4.78	□□□□□ -1.64
RSC30	YHR056C	RGI1	P40043	161 aa	Predicted RBP	4.78	□□□□□ -1.64
RSC30	YHR056C	DIA3	P52290	468 aa		4.78	□□□□□ -1.64
RSC30	YHR056C	ARO10	Q06408	635 aa		4.78	□□□□□ -1.64
RSC30	YHR056C	MFG1	Q07684	458 aa		4.78	□□□□□ -1.64
RSC30	YHR056C	YER190C-B	P0CX94	160 aa		4.77	□□□□□ -1.65
RSC30	YHR056C	YEL077W-A	P0CX95	160 aa		4.77	□□□□□ -1.65
RSC30	YHR056C	YGR296C-B	P0CX96	160 aa		4.77	□□□□□ -1.65
RSC30	YHR056C	YPL283W-B	P0CX97	160 aa		4.77	□□□□□ -1.65
RSC30	YHR056C	YPR204C-A	P0CX98	160 aa		4.77	□□□□□ -1.65
RSC30	YHR056C	YFL068W	P0CX99	160 aa		4.77	□□□□□ -1.65
RSC30	YHR056C	YLL066W-A	P0CY00	160 aa		4.77	□□□□□ -1.65
RSC30	YHR056C	YLL067W-A	P0CY01	160 aa		4.77	□□□□□ -1.65
RSC30	YHR056C	TIM12	P32830	109 aa		4.77	□□□□□ -1.65
RSC30	YHR056C	BNA1	P47096	177 aa		4.77	□□□□□ -1.65
RSC30	YHR056C	MRP51	Q02950	344 aa		4.77	□□□□□ -1.65
RSC30	YHR056C	YMR102C	Q03177	834 aa		4.77	□□□□□ -1.65
RSC30	YHR056C	KRE28	Q04431	385 aa		4.77	□□□□□ -1.65
RSC30	YHR056C	FRE8	Q12209	686 aa		4.77	□□□□□ -1.65
RSC30	YHR056C	RIB2	Q12362	591 aa	Known RBP	4.77	□□□□□ -1.65
RSC30	YHR056C	CLG1	P35190	452 aa		4.77	□□□□□ -1.65
RSC30	YHR056C	MRPL17	P36528	281 aa		4.77	□□□□□ -1.65
RSC30	YHR056C	FAT1	P38225	669 aa		4.77	□□□□□ -1.65
RSC30	YHR056C	YEL068C	P39977	110 aa		4.77	□□□□□ -1.65
RSC30	YHR056C	NUP57	P48837	541 aa		4.77	□□□□□ -1.65
RSC30	YHR056C	MPC1	P53157	130 aa	Known RBP	4.77	□□□□□ -1.65
RSC30	YHR056C	GEP7	P53171	287 aa		4.77	□□□□□ -1.65

Retrieved 100 of 5,963 RNA–protein pairs in 10.6 ms