RNA–Protein interactions for RNA: YFR004W

RPN11, Transcript of Metalloprotease subunit of 19S regulatory particle, yeastyeast

Gene RPN11, Length 921 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPN11YFR004W ROG1P53118 685 aa5.58□□□□□ -1.52
RPN11YFR004W VPS73P53142 486 aaKnown RBP5.58□□□□□ -1.52
RPN11YFR004W MRPL13Q02204 264 aa5.58□□□□□ -1.52
RPN11YFR004W FIN1Q03898 291 aa5.58□□□□□ -1.52
RPN11YFR004W RNH1Q04740 348 aa5.58□□□□□ -1.52
RPN11YFR004W VPS36Q06696 566 aa5.58□□□□□ -1.52
RPN11YFR004W RRP40Q08285 240 aaKnown RBP5.58□□□□□ -1.52
RPN11YFR004W SKS1Q12505 502 aa5.58□□□□□ -1.52
RPN11YFR004W ADE5,7P07244 802 aaKnown RBP5.57□□□□□ -1.52
RPN11YFR004W ZWF1P11412 505 aaKnown RBP5.57□□□□□ -1.52
RPN11YFR004W TFS1P14306 219 aa5.57□□□□□ -1.52
RPN11YFR004W YCK1P23291 538 aa5.57□□□□□ -1.52
RPN11YFR004W RRP7P25368 297 aaPredicted RBP5.57□□□□□ -1.52
RPN11YFR004W ADH7P25377 361 aa5.57□□□□□ -1.52
RPN11YFR004W CTS1P29029 562 aa5.57□□□□□ -1.52
RPN11YFR004W DBF20P32328 564 aa5.57□□□□□ -1.52
RPN11YFR004W ZRT3P34240 503 aa5.57□□□□□ -1.52
RPN11YFR004W DHR2P36009 735 aaPredicted RBP5.57□□□□□ -1.52
RPN11YFR004W SCO2P38072 301 aa5.57□□□□□ -1.52
RPN11YFR004W BNA4P38169 460 aa5.57□□□□□ -1.52
RPN11YFR004W MDM31P38880 579 aa5.57□□□□□ -1.52
RPN11YFR004W AIM10P39965 576 aaKnown RBP5.57□□□□□ -1.52
RPN11YFR004W ZRG8P40021 1076 aa5.57□□□□□ -1.52
RPN11YFR004W VRG4P40107 337 aa5.57□□□□□ -1.52
RPN11YFR004W HIS6P40545 261 aa5.57□□□□□ -1.52
RPN11YFR004W MET28P40573 187 aa5.57□□□□□ -1.52
RPN11YFR004W PRM10P42946 383 aa5.57□□□□□ -1.52
RPN11YFR004W QRI7P43122 407 aa5.57□□□□□ -1.52
RPN11YFR004W MPC1P53157 130 aaKnown RBP5.57□□□□□ -1.52
RPN11YFR004W MTQ1P53944 314 aa5.57□□□□□ -1.52
RPN11YFR004W FDC1Q03034 503 aa5.57□□□□□ -1.52
RPN11YFR004W PLP1Q04004 230 aa5.57□□□□□ -1.52
RPN11YFR004W YMR087WQ04299 284 aa5.57□□□□□ -1.52
RPN11YFR004W RNH202Q05635 350 aa5.57□□□□□ -1.52
RPN11YFR004W NBA1Q08229 501 aaKnown RBP5.57□□□□□ -1.52
RPN11YFR004W REX4Q08237 289 aa5.57□□□□□ -1.52
RPN11YFR004W LEU9Q12166 604 aaKnown RBP5.57□□□□□ -1.52
RPN11YFR004W YOR114WQ12219 294 aa5.57□□□□□ -1.52
RPN11YFR004W LAG2Q92325 660 aa5.57□□□□□ -1.52
RPN11YFR004W SAC7P17121 654 aa5.56□□□□□ -1.52
RPN11YFR004W GRX2P17695 143 aaKnown RBP5.56□□□□□ -1.52
RPN11YFR004W CHA1P25379 360 aaKnown RBP5.56□□□□□ -1.52
RPN11YFR004W SSH4P32343 579 aa5.56□□□□□ -1.52
RPN11YFR004W SPT14P32363 452 aa5.56□□□□□ -1.52
RPN11YFR004W ARC19P33204 171 aaKnown RBP5.56□□□□□ -1.52
RPN11YFR004W YHR035WP38769 630 aa5.56□□□□□ -1.52
RPN11YFR004W YHR210CP38893 341 aa5.56□□□□□ -1.52
RPN11YFR004W SYG1P40528 902 aa5.56□□□□□ -1.52
RPN11YFR004W MAD2P40958 196 aa5.56□□□□□ -1.52
RPN11YFR004W PAC11P40960 533 aa5.56□□□□□ -1.52
RPN11YFR004W RAD17P48581 401 aa5.56□□□□□ -1.52
RPN11YFR004W NIT3P49954 291 aa5.56□□□□□ -1.52
RPN11YFR004W LSG1P53145 640 aaKnown RBP5.56□□□□□ -1.52
RPN11YFR004W CDH1P53197 566 aa5.56□□□□□ -1.52
RPN11YFR004W MEP3P53390 489 aa5.56□□□□□ -1.52
RPN11YFR004W GRX3Q03835 250 aa5.56□□□□□ -1.52
RPN11YFR004W ROY1Q04847 553 aa5.56□□□□□ -1.52
RPN11YFR004W YLR446WQ06204 433 aa5.56□□□□□ -1.52
RPN11YFR004W YOL107WQ12239 342 aa5.56□□□□□ -1.52
RPN11YFR004W YLR111WQ12528 110 aa5.56□□□□□ -1.52
RPN11YFR004W GPM1P00950 247 aaKnown RBP5.55□□□□□ -1.52
RPN11YFR004W PET122P10355 254 aa5.55□□□□□ -1.52
RPN11YFR004W HOM3P10869 527 aa5.55□□□□□ -1.52
RPN11YFR004W CAP2P13517 287 aa5.55□□□□□ -1.52
RPN11YFR004W DBF2P22204 572 aa5.55□□□□□ -1.52
RPN11YFR004W NNK1P36003 928 aa5.55□□□□□ -1.52
RPN11YFR004W NVJ1P38881 321 aa5.55□□□□□ -1.52
RPN11YFR004W AXL2P38928 823 aa5.55□□□□□ -1.52
RPN11YFR004W PLB1P39105 664 aa5.55□□□□□ -1.52
RPN11YFR004W FMC1P40491 155 aa5.55□□□□□ -1.52
RPN11YFR004W YJL218WP40892 196 aaKnown RBP5.55□□□□□ -1.52
RPN11YFR004W PSA1P41940 361 aaKnown RBP5.55□□□□□ -1.52
RPN11YFR004W IRC7P43623 340 aa5.55□□□□□ -1.52
RPN11YFR004W UBC9P50623 157 aaPredicted RBP5.55□□□□□ -1.52
RPN11YFR004W TNA1P53322 534 aa5.55□□□□□ -1.52
RPN11YFR004W MKC7P53379 596 aa5.55□□□□□ -1.52
RPN11YFR004W BUD17P53727 317 aa5.55□□□□□ -1.52
RPN11YFR004W DBP6P53734 629 aaKnown RBP5.55□□□□□ -1.52
RPN11YFR004W RHO4Q00246 291 aa5.55□□□□□ -1.52
RPN11YFR004W ABZ2Q03266 374 aa5.55□□□□□ -1.52
RPN11YFR004W NOP12Q08208 459 aaKnown RBP5.55□□□□□ -1.52
RPN11YFR004W FRE5Q08908 694 aa5.55□□□□□ -1.52
RPN11YFR004W RPS21BQ3E754 87 aaKnown RBP5.55□□□□□ -1.52
RPN11YFR004W PNO1Q99216 274 aaKnown RBP5.55□□□□□ -1.52
RPN11YFR004W CYR1P08678 2026 aaKnown RBP5.55□□□□□ -1.52
RPN11YFR004W RPL7AP05737 244 aaKnown RBP5.54□□□□□ -1.52
RPN11YFR004W RPL6BP05739 176 aaKnown RBP5.54□□□□□ -1.52
RPN11YFR004W STE7P06784 515 aa5.54□□□□□ -1.52
RPN11YFR004W CAR2P07991 424 aaKnown RBP5.54□□□□□ -1.52
RPN11YFR004W GAL7P08431 366 aa5.54□□□□□ -1.52
RPN11YFR004W CMP2P14747 604 aa5.54□□□□□ -1.52
RPN11YFR004W SNF6P18888 332 aa5.54□□□□□ -1.52
RPN11YFR004W YCL002CP25565 263 aa5.54□□□□□ -1.52
RPN11YFR004W MSN2P33748 704 aa5.54□□□□□ -1.52
RPN11YFR004W TOD6P34219 525 aa5.54□□□□□ -1.52
RPN11YFR004W CLG1P35190 452 aa5.54□□□□□ -1.52
RPN11YFR004W UTP30P36144 274 aaKnown RBP5.54□□□□□ -1.52
RPN11YFR004W ASC1P38011 319 aaKnown RBP5.54□□□□□ -1.52
RPN11YFR004W YBR137WP38276 179 aa5.54□□□□□ -1.52
RPN11YFR004W RTC2P38279 296 aa5.54□□□□□ -1.52
Retrieved 100 of 5,963 RNA–protein pairs in 19.5 ms