RNA–Protein interactions for RNA: YER088W-B

YER088W-B, Transcript of Dubious open reading frame, yeastyeast

Gene YER088W-B, Length 147 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YER088W-BYER088W-B DAM1P53267 343 aa12.68□□□□□ -0.38
YER088W-BYER088W-B SNF12P53628 566 aa12.68□□□□□ -0.38
YER088W-BYER088W-B MPP6P53725 186 aaPredicted RBP12.68□□□□□ -0.38
YER088W-BYER088W-B GRE1Q08969 168 aa12.68□□□□□ -0.38
YER088W-BYER088W-B SPC3Q12133 184 aa12.68□□□□□ -0.38
YER088W-BYER088W-B YOR343CQ12484 108 aa12.68□□□□□ -0.38
YER088W-BYER088W-B CDC39P25655 2108 aaKnown RBP12.68□□□□□ -0.38
YER088W-BYER088W-B CAR2P07991 424 aaKnown RBP12.67□□□□□ -0.38
YER088W-BYER088W-B PEP12P32854 288 aa12.67□□□□□ -0.38
YER088W-BYER088W-B SLM4P38247 162 aa12.67□□□□□ -0.38
YER088W-BYER088W-B RFC4P40339 323 aaKnown RBP12.67□□□□□ -0.38
YER088W-BYER088W-B SNL1P40548 159 aa12.67□□□□□ -0.38
YER088W-BYER088W-B SOK2P53438 785 aaPredicted RBP12.67□□□□□ -0.38
YER088W-BYER088W-B ALG12P53730 551 aa12.67□□□□□ -0.38
YER088W-BYER088W-B SCS7Q03529 384 aa12.67□□□□□ -0.38
YER088W-BYER088W-B SNT309Q06091 175 aaPredicted RBP12.67□□□□□ -0.38
YER088W-BYER088W-B RIB3Q99258 208 aa12.67□□□□□ -0.38
YER088W-BYER088W-B NUP1P20676 1076 aa12.66□□□□□ -0.38
YER088W-BYER088W-B MAK32P23060 363 aa12.66□□□□□ -0.38
YER088W-BYER088W-B PRP28P23394 588 aa12.66□□□□□ -0.38
YER088W-BYER088W-B BLM10P43583 2143 aa12.66□□□□□ -0.38
YER088W-BYER088W-B IRC7P43623 340 aa12.66□□□□□ -0.38
YER088W-BYER088W-B COS1P53822 381 aa12.66□□□□□ -0.38
YER088W-BYER088W-B DML1Q03652 475 aa12.66□□□□□ -0.38
YER088W-BYER088W-B SNO4Q04902 237 aa12.66□□□□□ -0.38
YER088W-BYER088W-B LOT6Q07923 191 aa12.66□□□□□ -0.38
YER088W-BYER088W-B HSP33Q08914 237 aaKnown RBP12.66□□□□□ -0.38
YER088W-BYER088W-B HSP32Q08992 237 aa12.66□□□□□ -0.38
YER088W-BYER088W-B ATR1P13090 542 aa12.65□□□□□ -0.38
YER088W-BYER088W-B BUD5P25300 642 aaPredicted RBP12.65□□□□□ -0.38
YER088W-BYER088W-B PRE2P30656 287 aaKnown RBP12.65□□□□□ -0.38
YER088W-BYER088W-B YKL071WP36086 256 aa12.65□□□□□ -0.38
YER088W-BYER088W-B YMR262WP38430 313 aa12.65□□□□□ -0.38
YER088W-BYER088W-B NAB3P38996 802 aaKnown RBP RIP-Chip data12.65□□□□□ -0.38not detected
YER088W-BYER088W-B YJR098CP47139 656 aa12.65□□□□□ -0.38
YER088W-BYER088W-B ASI1P54074 624 aa12.65□□□□□ -0.38
YER088W-BYER088W-B ABZ2Q03266 374 aa12.65□□□□□ -0.38
YER088W-BYER088W-B VBA4Q04602 768 aaKnown RBP12.65□□□□□ -0.38
YER088W-BYER088W-B PEP4P07267 405 aaKnown RBP12.64□□□□□ -0.39
YER088W-BYER088W-B HAP4P14064 554 aa12.64□□□□□ -0.39
YER088W-BYER088W-B SNF6P18888 332 aa12.64□□□□□ -0.39
YER088W-BYER088W-B PRP19P32523 503 aaKnown RBP12.64□□□□□ -0.39
YER088W-BYER088W-B MSN4P33749 630 aa12.64□□□□□ -0.39
YER088W-BYER088W-B MAE1P36013 669 aaKnown RBP12.64□□□□□ -0.39
YER088W-BYER088W-B COS9P36034 407 aa12.64□□□□□ -0.39
YER088W-BYER088W-B AHP1P38013 176 aaKnown RBP12.64□□□□□ -0.39
YER088W-BYER088W-B PTH1P38876 190 aaKnown RBP12.64□□□□□ -0.39
YER088W-BYER088W-B FET3P38993 636 aa12.64□□□□□ -0.39
YER088W-BYER088W-B MSY1P48527 492 aa12.64□□□□□ -0.39
YER088W-BYER088W-B SET6Q12529 373 aa12.64□□□□□ -0.39
YER088W-BYER088W-B YDL007C-AQ2V2Q0 85 aa12.64□□□□□ -0.39
YER088W-BYER088W-B CHK1P38147 527 aa12.63□□□□□ -0.39
YER088W-BYER088W-B SBE22P38814 852 aa12.63□□□□□ -0.39
YER088W-BYER088W-B KRE29P40026 464 aa12.63□□□□□ -0.39
YER088W-BYER088W-B CHA4P43634 648 aa12.63□□□□□ -0.39
YER088W-BYER088W-B IDS2P46958 469 aa12.63□□□□□ -0.39
YER088W-BYER088W-B CRR1Q05790 422 aa12.63□□□□□ -0.39
YER088W-BYER088W-B EMG1Q06287 252 aaKnown RBP12.63□□□□□ -0.39
YER088W-BYER088W-B YPR147CQ06522 304 aaKnown RBP12.63□□□□□ -0.39
YER088W-BYER088W-B HRT1Q08273 121 aa12.63□□□□□ -0.39
YER088W-BYER088W-B SEC16P48415 2195 aaKnown RBP12.62□□□□□ -0.39
YER088W-BYER088W-B RHO1P06780 209 aaKnown RBP12.62□□□□□ -0.39
YER088W-BYER088W-B MCM1P11746 286 aa12.62□□□□□ -0.39
YER088W-BYER088W-B DPM1P14020 267 aaKnown RBP12.62□□□□□ -0.39
YER088W-BYER088W-B GDI1P39958 451 aaKnown RBP12.62□□□□□ -0.39
YER088W-BYER088W-B MRPL1Q04599 285 aa12.62□□□□□ -0.39
YER088W-BYER088W-B MEU1Q07938 337 aaKnown RBP RIP-Chip data12.62□□□□□ -0.39not detected
YER088W-BYER088W-B YDL176WQ12027 708 aa12.62□□□□□ -0.39
YER088W-BYER088W-B NIC96P34077 839 aa12.61□□□□□ -0.39
YER088W-BYER088W-B MRPL16P38064 232 aa12.61□□□□□ -0.39
YER088W-BYER088W-B RTC2P38279 296 aa12.61□□□□□ -0.39
YER088W-BYER088W-B TOK1P40310 691 aa12.61□□□□□ -0.39
YER088W-BYER088W-B YRB2P40517 327 aa12.61□□□□□ -0.39
YER088W-BYER088W-B YGL101WP53144 215 aa12.61□□□□□ -0.39
YER088W-BYER088W-B TFB3Q03290 321 aa12.61□□□□□ -0.39
YER088W-BYER088W-B UIP4Q08926 304 aa12.61□□□□□ -0.39
YER088W-BYER088W-B RCN2Q12044 265 aa12.61□□□□□ -0.39
YER088W-BYER088W-B RPS20P38701 121 aaKnown RBP12.6□□□□□ -0.39
YER088W-BYER088W-B QRI7P43122 407 aa12.6□□□□□ -0.39
YER088W-BYER088W-B MDE1P47095 244 aa12.6□□□□□ -0.39
YER088W-BYER088W-B BRR6P53062 197 aa12.6□□□□□ -0.39
YER088W-BYER088W-B YMR265CQ03508 461 aaKnown RBP12.6□□□□□ -0.39
YER088W-BYER088W-B COQ11Q05892 277 aa12.6□□□□□ -0.39
YER088W-BYER088W-B TAF3Q12297 353 aa12.6□□□□□ -0.39
YER088W-BYER088W-B FOL3Q12676 427 aaPredicted RBP12.6□□□□□ -0.39
YER088W-BYER088W-B HMG1P12683 1054 aa12.59□□□□□ -0.39
YER088W-BYER088W-B TFS1P14306 219 aa12.59□□□□□ -0.39
YER088W-BYER088W-B MTC6P38849 526 aa12.59□□□□□ -0.39
YER088W-BYER088W-B NAS2P40555 220 aa12.59□□□□□ -0.39
YER088W-BYER088W-B STB1P42845 420 aa12.59□□□□□ -0.39
YER088W-BYER088W-B KAP120Q02932 1032 aa12.59□□□□□ -0.39
YER088W-BYER088W-B NIP7Q08962 181 aaKnown RBP12.59□□□□□ -0.39
YER088W-BYER088W-B SBA1P28707 216 aaKnown RBP12.58□□□□□ -0.4
YER088W-BYER088W-B MDH3P32419 343 aaKnown RBP RIP-Chip data12.58□□□□□ -0.4not detected
YER088W-BYER088W-B PAD1P33751 242 aaKnown RBP RIP-Chip data12.58□□□□□ -0.4not detected
YER088W-BYER088W-B MRPL39P36533 70 aa12.58□□□□□ -0.4
YER088W-BYER088W-B RRG9P40156 214 aa12.58□□□□□ -0.4
YER088W-BYER088W-B ADO1P47143 340 aaKnown RBP12.58□□□□□ -0.4
YER088W-BYER088W-B EXG2P52911 562 aa12.58□□□□□ -0.4
YER088W-BYER088W-B SMP3Q04174 516 aa12.58□□□□□ -0.4
Retrieved 100 of 5,963 RNA–protein pairs in 49.2 ms