RNA–Protein interactions for RNA: YDL070W

BDF2, Transcript of Protein involved in transcription initiation, yeastyeast

Gene BDF2, Length 1,917 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
BDF2YDL070W YBR284WP38150 797 aa6.17□□□□□ -1.42
BDF2YDL070W PAU24P38155 120 aa6.17□□□□□ -1.42
BDF2YDL070W ZTA1P38230 334 aaKnown RBP6.17□□□□□ -1.42
BDF2YDL070W GCV3P39726 170 aaPredicted RBP6.17□□□□□ -1.42
BDF2YDL070W VAC8P39968 578 aa6.17□□□□□ -1.42
BDF2YDL070W PRM10P42946 383 aa6.17□□□□□ -1.42
BDF2YDL070W YJR111CP47148 283 aaKnown RBP6.17□□□□□ -1.42
BDF2YDL070W PHB2P50085 310 aa6.17□□□□□ -1.42
BDF2YDL070W SYF2P53277 215 aaPredicted RBP6.17□□□□□ -1.42
BDF2YDL070W PCL9Q12477 304 aa6.17□□□□□ -1.42
BDF2YDL070W YIL002W-AQ3E7Z5 69 aa6.17□□□□□ -1.42
BDF2YDL070W AI3P03877 415 aa6.16□□□□□ -1.42
BDF2YDL070W SCH9P11792 824 aaKnown RBP6.16□□□□□ -1.42
BDF2YDL070W PDA1P16387 420 aaKnown RBP6.16□□□□□ -1.42
BDF2YDL070W PTR2P32901 601 aa6.16□□□□□ -1.42
BDF2YDL070W TIP20P33891 701 aa6.16□□□□□ -1.42
BDF2YDL070W PXA2P34230 853 aa6.16□□□□□ -1.42
BDF2YDL070W MTH1P35198 433 aa6.16□□□□□ -1.42
BDF2YDL070W MRPL37P36532 105 aa6.16□□□□□ -1.42
BDF2YDL070W HSE1P38753 452 aa6.16□□□□□ -1.42
BDF2YDL070W LRP1P38801 184 aaKnown RBP6.16□□□□□ -1.42
BDF2YDL070W PTH1P38876 190 aaKnown RBP6.16□□□□□ -1.42
BDF2YDL070W RTS2P40962 232 aa6.16□□□□□ -1.42
BDF2YDL070W IBA57P47158 497 aa6.16□□□□□ -1.42
BDF2YDL070W YNL134CP53912 376 aaKnown RBP6.16□□□□□ -1.42
BDF2YDL070W ASI3P53983 676 aa6.16□□□□□ -1.42
BDF2YDL070W RCR2Q03446 210 aaKnown RBP6.16□□□□□ -1.42
BDF2YDL070W RPN4Q03465 531 aa6.16□□□□□ -1.42
BDF2YDL070W OST6Q03723 332 aa6.16□□□□□ -1.42
BDF2YDL070W LRS4Q04087 347 aaKnown RBP6.16□□□□□ -1.42
BDF2YDL070W PLM2Q04383 521 aa6.16□□□□□ -1.42
BDF2YDL070W GAS2Q06135 555 aa6.16□□□□□ -1.42
BDF2YDL070W TEN1Q07921 160 aa6.16□□□□□ -1.42
BDF2YDL070W GUP2Q08929 609 aa6.16□□□□□ -1.42
BDF2YDL070W YPR011CQ12251 326 aa6.16□□□□□ -1.42
BDF2YDL070W INP53Q12271 1107 aa6.16□□□□□ -1.42
BDF2YDL070W SLH1P53327 1967 aaKnown RBP6.16□□□□□ -1.42
BDF2YDL070W HIS5P07172 385 aa6.15□□□□□ -1.42
BDF2YDL070W NAM2P11325 894 aa6.15□□□□□ -1.42
BDF2YDL070W YCL002CP25565 263 aa6.15□□□□□ -1.42
BDF2YDL070W POT1P27796 417 aaKnown RBP RIP-Chip data6.15□□□□□ -1.42not detected
BDF2YDL070W PUB1P32588 453 aaKnown RBP RIP-Chip data6.15□□□□□ -1.42not detected
BDF2YDL070W CSE2P33308 149 aa6.15□□□□□ -1.42
BDF2YDL070W YHR177WP38867 453 aa6.15□□□□□ -1.42
BDF2YDL070W YIR016WP40572 265 aa6.15□□□□□ -1.42
BDF2YDL070W AIM24P47127 394 aa6.15□□□□□ -1.42
BDF2YDL070W DOC1P53068 250 aa6.15□□□□□ -1.42
BDF2YDL070W REC102Q02721 264 aa6.15□□□□□ -1.42
BDF2YDL070W YMR252CQ04814 134 aa6.15□□□□□ -1.42
BDF2YDL070W ECM22Q05958 814 aaPredicted RBP6.15□□□□□ -1.42
BDF2YDL070W KEI1Q06346 221 aa6.15□□□□□ -1.42
BDF2YDL070W MHR1Q06630 226 aa6.15□□□□□ -1.42
BDF2YDL070W CRT10Q08226 957 aa6.15□□□□□ -1.42
BDF2YDL070W AVO1Q08236 1176 aa6.15□□□□□ -1.42
BDF2YDL070W RRI1Q12468 440 aa6.15□□□□□ -1.42
BDF2YDL070W GCD1P09032 578 aaPredicted RBP6.15□□□□□ -1.43
BDF2YDL070W YAR066WP0CX18 203 aa6.15□□□□□ -1.43
BDF2YDL070W YHR214WP0CX19 203 aa6.15□□□□□ -1.43
BDF2YDL070W SEC22P22214 214 aa6.15□□□□□ -1.43
BDF2YDL070W ITR1P30605 584 aa6.15□□□□□ -1.43
BDF2YDL070W MET22P32179 357 aa6.15□□□□□ -1.43
BDF2YDL070W PRP18P33411 251 aaPredicted RBP6.15□□□□□ -1.43
BDF2YDL070W ECT1P33412 323 aa6.15□□□□□ -1.43
BDF2YDL070W MIA40P36046 403 aa6.15□□□□□ -1.43
BDF2YDL070W SLM1P40485 686 aa6.15□□□□□ -1.43
BDF2YDL070W YHC3P47040 408 aa6.15□□□□□ -1.43
BDF2YDL070W MNN10P50108 393 aaKnown RBP6.15□□□□□ -1.43
BDF2YDL070W PNG1Q02890 363 aa6.15□□□□□ -1.43
BDF2YDL070W PEX25Q02969 394 aa6.15□□□□□ -1.43
BDF2YDL070W GRC3Q07845 632 aa6.15□□□□□ -1.43
BDF2YDL070W HTS1P07263 546 aaKnown RBP6.14□□□□□ -1.43
BDF2YDL070W GLK1P17709 500 aaKnown RBP6.14□□□□□ -1.43
BDF2YDL070W ZRC1P20107 442 aa6.14□□□□□ -1.43
BDF2YDL070W NTH1P32356 751 aa6.14□□□□□ -1.43
BDF2YDL070W DSS4P32601 143 aa6.14□□□□□ -1.43
BDF2YDL070W PHO11P35842 467 aa6.14□□□□□ -1.43
BDF2YDL070W KAE1P36132 386 aa6.14□□□□□ -1.43
BDF2YDL070W ATG8P38182 117 aaRIP-Chip data6.14□□□□□ -1.43not detected
BDF2YDL070W YBR071WP38243 211 aa6.14□□□□□ -1.43
BDF2YDL070W PHO12P38693 467 aa6.14□□□□□ -1.43
BDF2YDL070W CHL4P38907 458 aa6.14□□□□□ -1.43
BDF2YDL070W YJR141WP47172 347 aaPredicted RBP6.14□□□□□ -1.43
BDF2YDL070W PRP24P49960 444 aaKnown RBP6.14□□□□□ -1.43
BDF2YDL070W MNT2P53059 558 aa6.14□□□□□ -1.43
BDF2YDL070W YGR079WP53249 370 aa6.14□□□□□ -1.43
BDF2YDL070W OKP1P53298 406 aa6.14□□□□□ -1.43
BDF2YDL070W PAU12P53343 120 aa6.14□□□□□ -1.43
BDF2YDL070W MEP3P53390 489 aa6.14□□□□□ -1.43
BDF2YDL070W ARG5,6Q01217 863 aa6.14□□□□□ -1.43
BDF2YDL070W CAC2Q04199 468 aa6.14□□□□□ -1.43
BDF2YDL070W UTP15Q04305 513 aaKnown RBP6.14□□□□□ -1.43
BDF2YDL070W CYK3Q07533 885 aa6.14□□□□□ -1.43
BDF2YDL070W YPR145C-AQ2V2P0 78 aa6.14□□□□□ -1.43
BDF2YDL070W YJR112W-AQ3E743 109 aa6.14□□□□□ -1.43
BDF2YDL070W PUT1P09368 476 aa6.13□□□□□ -1.43
BDF2YDL070W HOM3P10869 527 aa6.13□□□□□ -1.43
BDF2YDL070W MRPL8P22353 238 aa6.13□□□□□ -1.43
BDF2YDL070W MIH1P23748 554 aa6.13□□□□□ -1.43
BDF2YDL070W ADE1P27616 306 aa6.13□□□□□ -1.43
BDF2YDL070W ATS1P31386 333 aa6.13□□□□□ -1.43
Retrieved 100 of 5,963 RNA–protein pairs in 17 ms