RNA–Protein interactions for RNA: YBL006C

LDB7, Transcript of Component of the RSC chromatin remodeling complex, yeastyeast

Gene LDB7, Length 543 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LDB7YBL006C YCR100CP25606 316 aa6.05□□□□□ -1.44
LDB7YBL006C IDH1P28834 360 aaKnown RBP RIP-Chip data6.05□□□□□ -1.44not detected
LDB7YBL006C ITR1P30605 584 aa6.05□□□□□ -1.44
LDB7YBL006C SNC1P31109 117 aa6.05□□□□□ -1.44
LDB7YBL006C HBS1P32769 611 aaKnown RBP6.05□□□□□ -1.44
LDB7YBL006C GDH2P33327 1092 aaKnown RBP6.05□□□□□ -1.44
LDB7YBL006C SOF1P33750 489 aaKnown RBP6.05□□□□□ -1.44
LDB7YBL006C MRPS5P33759 307 aa6.05□□□□□ -1.44
LDB7YBL006C YKL187CP34231 750 aa6.05□□□□□ -1.44
LDB7YBL006C MAE1P36013 669 aaKnown RBP6.05□□□□□ -1.44
LDB7YBL006C JEN1P36035 616 aa6.05□□□□□ -1.44
LDB7YBL006C SKG1P36169 355 aa6.05□□□□□ -1.44
LDB7YBL006C RPP1P38786 293 aa6.05□□□□□ -1.44
LDB7YBL006C KRE29P40026 464 aa6.05□□□□□ -1.44
LDB7YBL006C YTA6P40328 754 aa6.05□□□□□ -1.44
LDB7YBL006C MAM33P40513 266 aa6.05□□□□□ -1.44
LDB7YBL006C YGL235WP53071 178 aa6.05□□□□□ -1.44
LDB7YBL006C TIM10P87108 93 aa6.05□□□□□ -1.44
LDB7YBL006C YKR011CQ02209 353 aa6.05□□□□□ -1.44
LDB7YBL006C HAS1Q03532 505 aaKnown RBP6.05□□□□□ -1.44
LDB7YBL006C YPR127WQ06494 345 aa6.05□□□□□ -1.44
LDB7YBL006C TMC1Q08422 150 aaPredicted RBP6.05□□□□□ -1.44
LDB7YBL006C YPL191CQ08930 360 aa6.05□□□□□ -1.44
LDB7YBL006C YDL176WQ12027 708 aa6.05□□□□□ -1.44
LDB7YBL006C MHF1Q3E835 90 aa6.05□□□□□ -1.44
LDB7YBL006C MSN4P33749 630 aa6.04□□□□□ -1.44
LDB7YBL006C GPX1P36014 167 aa6.04□□□□□ -1.44
LDB7YBL006C CIN4P39110 191 aa6.04□□□□□ -1.44
LDB7YBL006C MAL12P53341 584 aa6.04□□□□□ -1.44
LDB7YBL006C YNR062CP53748 327 aa6.04□□□□□ -1.44
LDB7YBL006C ACS1Q01574 713 aa6.04□□□□□ -1.44
LDB7YBL006C SPR6Q01684 191 aa6.04□□□□□ -1.44
LDB7YBL006C MRP51Q02950 344 aa6.04□□□□□ -1.44
LDB7YBL006C PEX12Q04370 399 aa6.04□□□□□ -1.44
LDB7YBL006C PML1Q07930 204 aaPredicted RBP6.04□□□□□ -1.44
LDB7YBL006C OSW1Q08692 278 aa6.04□□□□□ -1.44
LDB7YBL006C ULA1Q12059 462 aa6.04□□□□□ -1.44
LDB7YBL006C TIM9O74700 87 aa6.03□□□□□ -1.44
LDB7YBL006C HAP4P14064 554 aa6.03□□□□□ -1.44
LDB7YBL006C THI4P32318 326 aa6.03□□□□□ -1.44
LDB7YBL006C MCM10P32354 571 aa6.03□□□□□ -1.44
LDB7YBL006C PPG1P32838 368 aa6.03□□□□□ -1.44
LDB7YBL006C ARC19P33204 171 aaKnown RBP6.03□□□□□ -1.44
LDB7YBL006C HCS1P34243 683 aa6.03□□□□□ -1.44
LDB7YBL006C YKL071WP36086 256 aa6.03□□□□□ -1.44
LDB7YBL006C SRO77P38163 1010 aa6.03□□□□□ -1.44
LDB7YBL006C YBR220CP38318 560 aa6.03□□□□□ -1.44
LDB7YBL006C GDI1P39958 451 aaKnown RBP6.03□□□□□ -1.44
LDB7YBL006C QRI1P43123 477 aaKnown RBP6.03□□□□□ -1.44
LDB7YBL006C MOB2P43563 287 aa6.03□□□□□ -1.44
LDB7YBL006C IRC7P43623 340 aa6.03□□□□□ -1.44
LDB7YBL006C YJR098CP47139 656 aa6.03□□□□□ -1.44
LDB7YBL006C BAT2P47176 376 aaKnown RBP6.03□□□□□ -1.44
LDB7YBL006C ELA1P53861 379 aaPredicted RBP6.03□□□□□ -1.44
LDB7YBL006C DBP9Q06218 594 aaKnown RBP6.03□□□□□ -1.44
LDB7YBL006C YHR214C-EQ8TGK0 99 aa6.03□□□□□ -1.44
LDB7YBL006C PRB1P09232 635 aa6.02□□□□□ -1.45
LDB7YBL006C SEC12P11655 471 aa6.02□□□□□ -1.45
LDB7YBL006C FET3P38993 636 aa6.02□□□□□ -1.45
LDB7YBL006C YER084WP40057 128 aa6.02□□□□□ -1.45
LDB7YBL006C YIL166CP40445 542 aa6.02□□□□□ -1.45
LDB7YBL006C NAS2P40555 220 aa6.02□□□□□ -1.45
LDB7YBL006C NOP9P47077 666 aaKnown RBP6.02□□□□□ -1.45
LDB7YBL006C DSL1P53847 754 aa6.02□□□□□ -1.45
LDB7YBL006C YNL095CP53932 642 aa6.02□□□□□ -1.45
LDB7YBL006C RCE1Q03530 315 aa6.02□□□□□ -1.45
LDB7YBL006C YAP6Q03935 383 aa6.02□□□□□ -1.45
LDB7YBL006C RSM24Q03976 319 aa6.02□□□□□ -1.45
LDB7YBL006C SWA2Q06677 668 aa6.02□□□□□ -1.45
LDB7YBL006C ISU2Q12056 156 aa6.02□□□□□ -1.45
LDB7YBL006C HMS1Q12398 434 aa6.02□□□□□ -1.45
LDB7YBL006C APC2Q12440 853 aa6.02□□□□□ -1.45
LDB7YBL006C YPR015CQ12531 247 aa6.02□□□□□ -1.45
LDB7YBL006C YOL162WP0CF19 215 aa6.01□□□□□ -1.45
LDB7YBL006C EXG1P23776 448 aaKnown RBP6.01□□□□□ -1.45
LDB7YBL006C CAM1P29547 415 aaKnown RBP6.01□□□□□ -1.45
LDB7YBL006C PRE2P30656 287 aaKnown RBP6.01□□□□□ -1.45
LDB7YBL006C NTG1P31378 399 aa6.01□□□□□ -1.45
LDB7YBL006C DBF20P32328 564 aa6.01□□□□□ -1.45
LDB7YBL006C NIC96P34077 839 aa6.01□□□□□ -1.45
LDB7YBL006C YBR241CP38142 488 aa6.01□□□□□ -1.45
LDB7YBL006C NAB3P38996 802 aaKnown RBP RIP-Chip data6.01□□□□□ -1.45 RIP-Chip
LDB7YBL006C VHR1P40522 640 aa6.01□□□□□ -1.45
LDB7YBL006C YIL012WP40551 113 aa6.01□□□□□ -1.45
LDB7YBL006C POP1P41812 875 aa6.01□□□□□ -1.45
LDB7YBL006C CAK1P43568 368 aaPredicted RBP6.01□□□□□ -1.45
LDB7YBL006C GPI8P49018 411 aa6.01□□□□□ -1.45
LDB7YBL006C ACS2P52910 683 aaKnown RBP6.01□□□□□ -1.45
LDB7YBL006C BRR6P53062 197 aa6.01□□□□□ -1.45
LDB7YBL006C TEX1P53851 422 aaKnown RBP6.01□□□□□ -1.45
LDB7YBL006C RPL6AQ02326 176 aaKnown RBP6.01□□□□□ -1.45
LDB7YBL006C RRN5Q02983 363 aa6.01□□□□□ -1.45
LDB7YBL006C DML1Q03652 475 aa6.01□□□□□ -1.45
LDB7YBL006C SSY1Q03770 852 aa6.01□□□□□ -1.45
LDB7YBL006C YDR102CQ03864 110 aa6.01□□□□□ -1.45
LDB7YBL006C SPC24Q04477 213 aa6.01□□□□□ -1.45
LDB7YBL006C SPC2Q04969 178 aa6.01□□□□□ -1.45
LDB7YBL006C SNT309Q06091 175 aaPredicted RBP6.01□□□□□ -1.45
LDB7YBL006C HRT1Q08273 121 aa6.01□□□□□ -1.45
LDB7YBL006C RTC5Q12108 567 aaKnown RBP6.01□□□□□ -1.45
Retrieved 100 of 5,963 RNA–protein pairs in 15.7 ms