RNA–Protein interactions for RNA: ENST00000641847.1

PHGDH-228, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 692 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-228ENST00000641847 RRAGBQ5VZM2 374 aa10.47□□□□□ -0.73
PHGDH-228ENST00000641847 GDF6Q6KF10 455 aaPredicted RBP10.47□□□□□ -0.73
PHGDH-228ENST00000641847 ABHD15Q6UXT9 468 aa10.47□□□□□ -0.73
PHGDH-228ENST00000641847 CATSPER3Q86XQ3 398 aa10.47□□□□□ -0.73
PHGDH-228ENST00000641847 TPH2Q8IWU9 490 aa10.47□□□□□ -0.73
PHGDH-228ENST00000641847 TMEM192Q8IY95 271 aa10.47□□□□□ -0.73
PHGDH-228ENST00000641847 PPTC7Q8NI37 304 aa10.47□□□□□ -0.73
PHGDH-228ENST00000641847 LRRC15Q8TF66 581 aa10.47□□□□□ -0.73
PHGDH-228ENST00000641847 PPP1R13LQ8WUF5 828 aa10.47□□□□□ -0.73
PHGDH-228ENST00000641847 GPR20Q99678 358 aa10.47□□□□□ -0.73
PHGDH-228ENST00000641847 HSD17B14Q9BPX1 270 aa10.47□□□□□ -0.73
PHGDH-228ENST00000641847 KATNAL1Q9BW62 490 aa10.47□□□□□ -0.73
PHGDH-228ENST00000641847 PANK2Q9BZ23 570 aa10.47□□□□□ -0.73
PHGDH-228ENST00000641847 TUFT1Q9NNX1 390 aa10.47□□□□□ -0.73
PHGDH-228ENST00000641847 DDX19AQ9NUU7 478 aaKnown RBP10.47□□□□□ -0.73
PHGDH-228ENST00000641847 FAM86C1Q9NVL1 165 aa10.47□□□□□ -0.73
PHGDH-228ENST00000641847 GABBR1Q9UBS5 961 aa10.47□□□□□ -0.73
PHGDH-228ENST00000641847 SERTAD1Q9UHV2 236 aa10.47□□□□□ -0.73
PHGDH-228ENST00000641847 CD207Q9UJ71 328 aa10.47□□□□□ -0.73
PHGDH-228ENST00000641847 PCDHA10Q9Y5I2 948 aa10.47□□□□□ -0.73
PHGDH-228ENST00000641847 IGSF9BQ9UPX0 1349 aa10.47□□□□□ -0.73
PHGDH-228ENST00000641847 GSTTP1A0A1W2PQM5 241 aa10.46□□□□□ -0.73
PHGDH-228ENST00000641847 BACH1O14867 736 aa10.46□□□□□ -0.73
PHGDH-228ENST00000641847 SLITRK3O94933 977 aa10.46□□□□□ -0.73
PHGDH-228ENST00000641847 ZNF202O95125 648 aa10.46□□□□□ -0.73
PHGDH-228ENST00000641847 P4HBP07237 508 aaKnown RBP10.46□□□□□ -0.73
PHGDH-228ENST00000641847 TCF7P36402 384 aaPredicted RBP10.46□□□□□ -0.73
PHGDH-228ENST00000641847 QARSP47897 775 aaKnown RBP10.46□□□□□ -0.73
PHGDH-228ENST00000641847 PSMC5P62195 406 aa10.46□□□□□ -0.73
PHGDH-228ENST00000641847 ZXDAP98168 799 aa10.46□□□□□ -0.73
PHGDH-228ENST00000641847 PTK7Q13308 1070 aa10.46□□□□□ -0.73
PHGDH-228ENST00000641847 UGCGQ16739 394 aa10.46□□□□□ -0.73
PHGDH-228ENST00000641847 HSDL1Q3SXM5 330 aa10.46□□□□□ -0.73
PHGDH-228ENST00000641847 FAM160B1Q5W0V3 765 aa10.46□□□□□ -0.73
PHGDH-228ENST00000641847 PDXDC2PQ6P474 469 aa10.46□□□□□ -0.73
PHGDH-228ENST00000641847 KRBA2Q6ZNG9 492 aa10.46□□□□□ -0.73
PHGDH-228ENST00000641847 CCDC60Q8IWA6 550 aaPredicted RBP10.46□□□□□ -0.73
PHGDH-228ENST00000641847 CEP57L1Q8IYX8 460 aa10.46□□□□□ -0.73
PHGDH-228ENST00000641847 IQUBQ8NA54 791 aa10.46□□□□□ -0.73
PHGDH-228ENST00000641847 CNNM3Q8NE01 707 aa10.46□□□□□ -0.73
PHGDH-228ENST00000641847 SP7Q8TDD2 431 aaPredicted RBP10.46□□□□□ -0.73
PHGDH-228ENST00000641847 AFG1LQ8WV93 481 aa10.46□□□□□ -0.73
PHGDH-228ENST00000641847 SEPT1Q8WYJ6 367 aa10.46□□□□□ -0.73
PHGDH-228ENST00000641847 ATP6V0A1Q93050 837 aa10.46□□□□□ -0.73
PHGDH-228ENST00000641847 C11orf84Q9BUA3 381 aaPredicted RBP10.46□□□□□ -0.73
PHGDH-228ENST00000641847 NT5C3AQ9H0P0 336 aa10.46□□□□□ -0.73
PHGDH-228ENST00000641847 LMAN2LQ9H0V9 348 aa10.46□□□□□ -0.73
PHGDH-228ENST00000641847 CLSTN2Q9H4D0 955 aa10.46□□□□□ -0.73
PHGDH-228ENST00000641847 ZNF302Q9NR11 478 aa10.46□□□□□ -0.73
PHGDH-228ENST00000641847 WRAP73Q9P2S5 460 aaPredicted RBP10.46□□□□□ -0.73
PHGDH-228ENST00000641847 USP25Q9UHP3 1055 aa10.46□□□□□ -0.73
PHGDH-228ENST00000641847 KIAA1024Q9UPX6 916 aa10.46□□□□□ -0.73
PHGDH-228ENST00000641847 RWDD3Q9Y3V2 267 aa10.46□□□□□ -0.73
PHGDH-228ENST00000641847 WDR81Q562E7 1941 aa10.46□□□□□ -0.74
PHGDH-228ENST00000641847 LOXHD1Q8IVV2 1947 aa10.46□□□□□ -0.74
PHGDH-228ENST00000641847 ARID2Q68CP9 1835 aa10.45□□□□□ -0.74
PHGDH-228ENST00000641847 IGKV6D-21A0A0A0MT36 114 aa10.45□□□□□ -0.74
PHGDH-228ENST00000641847 PROB1E7EW31 1015 aa10.45□□□□□ -0.74
PHGDH-228ENST00000641847 E9PMD0 336 aa10.45□□□□□ -0.74
PHGDH-228ENST00000641847 ATG7O95352 703 aa10.45□□□□□ -0.74
PHGDH-228ENST00000641847 RB1P06400 928 aa10.45□□□□□ -0.74
PHGDH-228ENST00000641847 MMP3P08254 477 aa10.45□□□□□ -0.74
PHGDH-228ENST00000641847 MUTP22033 750 aa10.45□□□□□ -0.74
PHGDH-228ENST00000641847 LTBRP36941 435 aa10.45□□□□□ -0.74
PHGDH-228ENST00000641847 ID4P47928 161 aa10.45□□□□□ -0.74
PHGDH-228ENST00000641847 SIGLEC14Q08ET2 396 aa10.45□□□□□ -0.74
PHGDH-228ENST00000641847 GPNMBQ14956 572 aa10.45□□□□□ -0.74
PHGDH-228ENST00000641847 DGKDQ16760 1214 aa10.45□□□□□ -0.74
PHGDH-228ENST00000641847 CTC1Q2NKJ3 1217 aa10.45□□□□□ -0.74
PHGDH-228ENST00000641847 LONRF3Q496Y0 759 aa10.45□□□□□ -0.74
PHGDH-228ENST00000641847 NAALADL2Q58DX5 795 aa10.45□□□□□ -0.74
PHGDH-228ENST00000641847 CCDC183Q5T5S1 534 aa10.45□□□□□ -0.74
PHGDH-228ENST00000641847 UTP14CQ5TAP6 766 aaKnown RBP10.45□□□□□ -0.74
PHGDH-228ENST00000641847 SWSAP1Q6NVH7 229 aa10.45□□□□□ -0.74
PHGDH-228ENST00000641847 CAVIN1Q6NZI2 390 aaKnown RBP10.45□□□□□ -0.74
PHGDH-228ENST00000641847 LIN28BQ6ZN17 250 aaKnown RBP eCLIP10.45□□□□□ -0.74
PHGDH-228ENST00000641847 KCNK18Q7Z418 384 aa10.45□□□□□ -0.74
PHGDH-228ENST00000641847 TRIM50Q86XT4 487 aa10.45□□□□□ -0.74
PHGDH-228ENST00000641847 RAD54LQ92698 747 aa10.45□□□□□ -0.74
PHGDH-228ENST00000641847 TIGD1Q96MW7 591 aa10.45□□□□□ -0.74
PHGDH-228ENST00000641847 NUP62CLQ9H1M0 184 aa10.45□□□□□ -0.74
PHGDH-228ENST00000641847 CUEDC2Q9H467 287 aa10.45□□□□□ -0.74
PHGDH-228ENST00000641847 ZSWIM4Q9H7M6 989 aa10.45□□□□□ -0.74
PHGDH-228ENST00000641847 MAGEF1Q9HAY2 307 aa10.45□□□□□ -0.74
PHGDH-228ENST00000641847 BLOC1S4Q9NUP1 217 aa10.45□□□□□ -0.74
PHGDH-228ENST00000641847 STK17AQ9UEE5 414 aa10.45□□□□□ -0.74
PHGDH-228ENST00000641847 GTF2IRD1Q9UHL9 959 aa10.45□□□□□ -0.74
PHGDH-228ENST00000641847 TRPC6Q9Y210 931 aa10.45□□□□□ -0.74
PHGDH-228ENST00000641847 TECTAO75443 2155 aa10.45□□□□□ -0.74
PHGDH-228ENST00000641847 TET1Q8NFU7 2136 aa10.45□□□□□ -0.74
PHGDH-228ENST00000641847 FRYLO94915 3013 aa10.44□□□□□ -0.74
PHGDH-228ENST00000641847 DKC1O60832 514 aaKnown RBP eCLIP10.44□□□□□ -0.74
PHGDH-228ENST00000641847 UPP2O95045 317 aa10.44□□□□□ -0.74
PHGDH-228ENST00000641847 LYPLA2O95372 231 aa10.44□□□□□ -0.74
PHGDH-228ENST00000641847 LGALS2P05162 132 aa10.44□□□□□ -0.74
PHGDH-228ENST00000641847 SSBP05455 408 aaKnown RBP eCLIP10.44□□□□□ -0.74
PHGDH-228ENST00000641847 SLFN14P0C7P3 912 aa10.44□□□□□ -0.74
PHGDH-228ENST00000641847 ZNF286BP0CG31 522 aa10.44□□□□□ -0.74
PHGDH-228ENST00000641847 AVPR2P30518 371 aa10.44□□□□□ -0.74
PHGDH-228ENST00000641847 CTNNB1P35222 781 aa10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms