RNA–Protein interactions for RNA: ENST00000641513.1

PHGDH-219, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 735 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-219ENST00000641513 TRPC6Q9Y210 931 aa9.71□□□□□ -0.86
PHGDH-219ENST00000641513 TRAF3IP3Q9Y228 551 aa9.71□□□□□ -0.86
PHGDH-219ENST00000641513 RFC5P40937 340 aa9.7□□□□□ -0.86
PHGDH-219ENST00000641513 RGS2P41220 211 aa9.7□□□□□ -0.86
PHGDH-219ENST00000641513 ARHGAP1Q07960 439 aa9.7□□□□□ -0.86
PHGDH-219ENST00000641513 ACVR2BQ13705 512 aa9.7□□□□□ -0.86
PHGDH-219ENST00000641513 MORN1Q5T089 497 aa9.7□□□□□ -0.86
PHGDH-219ENST00000641513 TCERG1LQ5VWI1 586 aa9.7□□□□□ -0.86
PHGDH-219ENST00000641513 TRIM65Q6PJ69 517 aa9.7□□□□□ -0.86
PHGDH-219ENST00000641513 C17orf99Q6UX52 265 aa9.7□□□□□ -0.86
PHGDH-219ENST00000641513 MAMDC4Q6UXC1 1216 aa9.7□□□□□ -0.86
PHGDH-219ENST00000641513 OR6J1Q8NGC5 347 aa9.7□□□□□ -0.86
PHGDH-219ENST00000641513 GOLGA5Q8TBA6 731 aa9.7□□□□□ -0.86
PHGDH-219ENST00000641513 AFAP1L1Q8TED9 768 aa9.7□□□□□ -0.86
PHGDH-219ENST00000641513 BBXQ8WY36 941 aaPredicted RBP9.7□□□□□ -0.86
PHGDH-219ENST00000641513 TMEM143Q96AN5 459 aa9.7□□□□□ -0.86
PHGDH-219ENST00000641513 IQCDQ96DY2 449 aa9.7□□□□□ -0.86
PHGDH-219ENST00000641513 ZIC5Q96T25 663 aa9.7□□□□□ -0.86
PHGDH-219ENST00000641513 KIFC3Q9BVG8 833 aa9.7□□□□□ -0.86
PHGDH-219ENST00000641513 NIFKQ9BYG3 293 aaKnown RBP9.7□□□□□ -0.86
PHGDH-219ENST00000641513 IKZF4Q9H2S9 585 aa9.7□□□□□ -0.86
PHGDH-219ENST00000641513 NDST4Q9H3R1 872 aa9.7□□□□□ -0.86
PHGDH-219ENST00000641513 ABHD16BQ9H3Z7 469 aa9.7□□□□□ -0.86
PHGDH-219ENST00000641513 TMEM206Q9H813 350 aa9.7□□□□□ -0.86
PHGDH-219ENST00000641513 OGFRQ9NZT2 677 aa9.7□□□□□ -0.86
PHGDH-219ENST00000641513 ARMCX3Q9UH62 379 aaPredicted RBP9.7□□□□□ -0.86
PHGDH-219ENST00000641513 EXOC7Q9UPT5 735 aa9.7□□□□□ -0.86
PHGDH-219ENST00000641513 FRMD4BQ9Y2L6 1034 aa9.7□□□□□ -0.86
PHGDH-219ENST00000641513 PPP2R2CQ9Y2T4 447 aa9.7□□□□□ -0.86
PHGDH-219ENST00000641513 UTP18Q9Y5J1 556 aaKnown RBP eCLIP9.7□□□□□ -0.86
PHGDH-219ENST00000641513 ZMYM2Q9UBW7 1377 aa9.7□□□□□ -0.86
PHGDH-219ENST00000641513 TRIP12Q14669 1992 aaPredicted RBP9.7□□□□□ -0.86
PHGDH-219ENST00000641513 C11orf97A0A1B0GVM6 126 aaPredicted RBP9.69□□□□□ -0.86
PHGDH-219ENST00000641513 A0A1W2PQC6 194 aa9.69□□□□□ -0.86
PHGDH-219ENST00000641513 RBM47A0AV96 593 aaKnown RBP9.69□□□□□ -0.86
PHGDH-219ENST00000641513 DENND3A2RUS2 1198 aa9.69□□□□□ -0.86
PHGDH-219ENST00000641513 LRRIQ4A6NIV6 560 aa9.69□□□□□ -0.86
PHGDH-219ENST00000641513 TGFB1I1O43294 461 aa9.69□□□□□ -0.86
PHGDH-219ENST00000641513 AOC2O75106 756 aa9.69□□□□□ -0.86
PHGDH-219ENST00000641513 LGR5O75473 907 aa9.69□□□□□ -0.86
PHGDH-219ENST00000641513 CASP14P31944 242 aa9.69□□□□□ -0.86
PHGDH-219ENST00000641513 NPTX2P47972 431 aa9.69□□□□□ -0.86
PHGDH-219ENST00000641513 TM4SF4P48230 202 aa9.69□□□□□ -0.86
PHGDH-219ENST00000641513 NCKAP1LP55160 1127 aa9.69□□□□□ -0.86
PHGDH-219ENST00000641513 CHMP4BP1P59074 171 aa9.69□□□□□ -0.86
PHGDH-219ENST00000641513 PLCB4Q15147 1175 aa9.69□□□□□ -0.86
PHGDH-219ENST00000641513 TSR1Q2NL82 804 aaKnown RBP9.69□□□□□ -0.86
PHGDH-219ENST00000641513 DCAF17Q5H9S7 520 aaPredicted RBP9.69□□□□□ -0.86
PHGDH-219ENST00000641513 MIIPQ5JXC2 388 aa9.69□□□□□ -0.86
PHGDH-219ENST00000641513 PRAMEF19Q5SWL8 479 aa9.69□□□□□ -0.86
PHGDH-219ENST00000641513 PLPPR4Q7Z2D5 763 aa9.69□□□□□ -0.86
PHGDH-219ENST00000641513 EMSYQ7Z589 1322 aa9.69□□□□□ -0.86
PHGDH-219ENST00000641513 FRMD5Q7Z6J6 570 aa9.69□□□□□ -0.86
PHGDH-219ENST00000641513 FAM186BQ8IYM0 893 aa9.69□□□□□ -0.86
PHGDH-219ENST00000641513 DEPTORQ8TB45 409 aa9.69□□□□□ -0.86
PHGDH-219ENST00000641513 ATP8B4Q8TF62 1192 aa9.69□□□□□ -0.86
PHGDH-219ENST00000641513 AFG1LQ8WV93 481 aa9.69□□□□□ -0.86
PHGDH-219ENST00000641513 BSNDQ8WZ55 320 aa9.69□□□□□ -0.86
PHGDH-219ENST00000641513 HVCN1Q96D96 273 aa9.69□□□□□ -0.86
PHGDH-219ENST00000641513 BICD1Q96G01 975 aa9.69□□□□□ -0.86
PHGDH-219ENST00000641513 HHIPL1Q96JK4 782 aa9.69□□□□□ -0.86
PHGDH-219ENST00000641513 FIZ1Q96SL8 496 aa9.69□□□□□ -0.86
PHGDH-219ENST00000641513 NUP58Q9BVL2 599 aa9.69□□□□□ -0.86
PHGDH-219ENST00000641513 PCIF1Q9H4Z3 704 aa9.69□□□□□ -0.86
PHGDH-219ENST00000641513 MMRN2Q9H8L6 949 aa9.69□□□□□ -0.86
PHGDH-219ENST00000641513 SUGCTQ9HAC7 445 aa9.69□□□□□ -0.86
PHGDH-219ENST00000641513 C17orf75Q9HAS0 396 aa9.69□□□□□ -0.86
PHGDH-219ENST00000641513 XPNPEP1Q9NQW7 623 aa9.69□□□□□ -0.86
PHGDH-219ENST00000641513 AGPAT3Q9NRZ7 376 aa9.69□□□□□ -0.86
PHGDH-219ENST00000641513 TRMT1Q9NXH9 659 aaKnown RBP9.69□□□□□ -0.86
PHGDH-219ENST00000641513 MYO1AQ9UBC5 1043 aa9.69□□□□□ -0.86
PHGDH-219ENST00000641513 KCNG1Q9UIX4 513 aa9.69□□□□□ -0.86
PHGDH-219ENST00000641513 CASP8AP2Q9UKL3 1982 aa9.69□□□□□ -0.86
PHGDH-219ENST00000641513 ZNF215Q9UL58 517 aaPredicted RBP9.69□□□□□ -0.86
PHGDH-219ENST00000641513 EFCAB8A8MWE9 144 aa9.68□□□□□ -0.86
PHGDH-219ENST00000641513 H0YCG3 227 aa9.68□□□□□ -0.86
PHGDH-219ENST00000641513 NKRFO15226 690 aaKnown RBP eCLIP9.68□□□□□ -0.86
PHGDH-219ENST00000641513 SLC16A3O15427 465 aaKnown RBP9.68□□□□□ -0.86
PHGDH-219ENST00000641513 ATP8B1O43520 1251 aa9.68□□□□□ -0.86
PHGDH-219ENST00000641513 CA12O43570 354 aa9.68□□□□□ -0.86
PHGDH-219ENST00000641513 EXOC3O60645 756 aa9.68□□□□□ -0.86
PHGDH-219ENST00000641513 MFAP3LO75121 409 aa9.68□□□□□ -0.86
PHGDH-219ENST00000641513 PPP1R37O75864 691 aa9.68□□□□□ -0.86
PHGDH-219ENST00000641513 ALDH1A1P00352 501 aa9.68□□□□□ -0.86
PHGDH-219ENST00000641513 LGALS2P05162 132 aa9.68□□□□□ -0.86
PHGDH-219ENST00000641513 CCDC175P0C221 793 aa9.68□□□□□ -0.86
PHGDH-219ENST00000641513 XRCC5P13010 732 aaKnown RBP9.68□□□□□ -0.86
PHGDH-219ENST00000641513 H2AFXP16104 143 aaPredicted RBP9.68□□□□□ -0.86
PHGDH-219ENST00000641513 SMPD1P17405 629 aa9.68□□□□□ -0.86
PHGDH-219ENST00000641513 TRIM21P19474 475 aaKnown RBP9.68□□□□□ -0.86
PHGDH-219ENST00000641513 PSMC2P35998 433 aaKnown RBP9.68□□□□□ -0.86
PHGDH-219ENST00000641513 CASP4P49662 377 aa9.68□□□□□ -0.86
PHGDH-219ENST00000641513 KLK7P49862 253 aa9.68□□□□□ -0.86
PHGDH-219ENST00000641513 SLC26A2P50443 739 aa9.68□□□□□ -0.86
PHGDH-219ENST00000641513 FCGRTP55899 365 aa9.68□□□□□ -0.86
PHGDH-219ENST00000641513 IGBP1P78318 339 aa9.68□□□□□ -0.86
PHGDH-219ENST00000641513 GTF2BQ00403 316 aa9.68□□□□□ -0.86
PHGDH-219ENST00000641513 TNFAIP2Q03169 654 aa9.68□□□□□ -0.86
PHGDH-219ENST00000641513 STRN3Q13033 797 aa9.68□□□□□ -0.86
PHGDH-219ENST00000641513 PPP2R5AQ15172 486 aa9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 74.9 ms