RNA–Protein interactions for RNA: ENST00000641213.1

PHGDH-211, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,053 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-211ENST00000641213 DMGDHQ9UI17 866 aaKnown RBP18.59■□□□□ 0.57
PHGDH-211ENST00000641213 POLR2AP24928 1970 aaKnown RBP18.58■□□□□ 0.57
PHGDH-211ENST00000641213 LTBP3Q9NS15 1303 aa18.58■□□□□ 0.57
PHGDH-211ENST00000641213 WDR64B1ANS9 1081 aa18.58■□□□□ 0.57
PHGDH-211ENST00000641213 N4BP1O75113 896 aaKnown RBP18.58■□□□□ 0.57
PHGDH-211ENST00000641213 PTPRAP18433 802 aa18.58■□□□□ 0.57
PHGDH-211ENST00000641213 SFNP31947 248 aa18.58■□□□□ 0.57
PHGDH-211ENST00000641213 KRT76Q01546 638 aa18.58■□□□□ 0.57
PHGDH-211ENST00000641213 HAUS6Q7Z4H7 955 aa18.58■□□□□ 0.57
PHGDH-211ENST00000641213 C12orf56Q8IXR9 622 aa18.58■□□□□ 0.57
PHGDH-211ENST00000641213 GSPT2Q8IYD1 628 aaKnown RBP18.58■□□□□ 0.57
PHGDH-211ENST00000641213 REPS2Q8NFH8 660 aa18.58■□□□□ 0.57
PHGDH-211ENST00000641213 SLC30A5Q8TAD4 765 aa18.58■□□□□ 0.57
PHGDH-211ENST00000641213 HINFPQ9BQA5 517 aa18.58■□□□□ 0.57
PHGDH-211ENST00000641213 GPR88Q9GZN0 384 aa18.58■□□□□ 0.57
PHGDH-211ENST00000641213 APEX2Q9UBZ4 518 aa18.58■□□□□ 0.57
PHGDH-211ENST00000641213 MYH9P35579 1960 aaKnown RBP18.58■□□□□ 0.56
PHGDH-211ENST00000641213 KRT13P13646 458 aa18.58■□□□□ 0.56
PHGDH-211ENST00000641213 TNNT3P45378 269 aaPredicted RBP18.58■□□□□ 0.56
PHGDH-211ENST00000641213 DNA2P51530 1060 aa18.58■□□□□ 0.56
PHGDH-211ENST00000641213 GTF2BQ00403 316 aa18.58■□□□□ 0.56
PHGDH-211ENST00000641213 LNX1Q8TBB1 728 aaPredicted RBP18.58■□□□□ 0.56
PHGDH-211ENST00000641213 ZBTB9Q96C00 473 aa18.58■□□□□ 0.56
PHGDH-211ENST00000641213 WRNIP1Q96S55 665 aa18.58■□□□□ 0.56
PHGDH-211ENST00000641213 TIPINQ9BVW5 301 aa18.58■□□□□ 0.56
PHGDH-211ENST00000641213 ST6GALNAC4Q9H4F1 302 aa18.58■□□□□ 0.56
PHGDH-211ENST00000641213 FZD1Q9UP38 647 aa18.58■□□□□ 0.56
PHGDH-211ENST00000641213 LCTP09848 1927 aa18.57■□□□□ 0.56
PHGDH-211ENST00000641213 H2AFZP0C0S5 128 aa18.57■□□□□ 0.56
PHGDH-211ENST00000641213 DLG4P78352 724 aa18.57■□□□□ 0.56
PHGDH-211ENST00000641213 IFI16Q16666 785 aaKnown RBP18.57■□□□□ 0.56
PHGDH-211ENST00000641213 PRAMEF18Q5VWM3 479 aa18.57■□□□□ 0.56
PHGDH-211ENST00000641213 XRRA1Q6P2D8 792 aa18.57■□□□□ 0.56
PHGDH-211ENST00000641213 H2AFVQ71UI9 128 aa18.57■□□□□ 0.56
PHGDH-211ENST00000641213 INTS8Q75QN2 995 aaKnown RBP18.57■□□□□ 0.56
PHGDH-211ENST00000641213 TRMT1LQ7Z2T5 733 aaKnown RBP18.57■□□□□ 0.56
PHGDH-211ENST00000641213 VSIG10LQ86VR7 867 aa18.57■□□□□ 0.56
PHGDH-211ENST00000641213 LRRC57Q8N9N7 239 aa18.57■□□□□ 0.56
PHGDH-211ENST00000641213 LMO3Q8TAP4 145 aa18.57■□□□□ 0.56
PHGDH-211ENST00000641213 U2AF1L4Q8WU68 220 aaKnown RBP18.57■□□□□ 0.56
PHGDH-211ENST00000641213 CBWD1Q9BRT8 395 aa18.57■□□□□ 0.56
PHGDH-211ENST00000641213 MTFR1LQ9H019 292 aa18.57■□□□□ 0.56
PHGDH-211ENST00000641213 GPRC5CQ9NQ84 441 aa18.57■□□□□ 0.56
PHGDH-211ENST00000641213 PICK1Q9NRD5 415 aa18.57■□□□□ 0.56
PHGDH-211ENST00000641213 ANKEF1Q9NU02 776 aa18.57■□□□□ 0.56
PHGDH-211ENST00000641213 TCEAL9Q9UHQ7 104 aa18.57■□□□□ 0.56
PHGDH-211ENST00000641213 INTUQ9ULD6 942 aa18.57■□□□□ 0.56
PHGDH-211ENST00000641213 CCND2P30279 289 aa18.56■□□□□ 0.56
PHGDH-211ENST00000641213 NOP2P46087 812 aaKnown RBP18.56■□□□□ 0.56
PHGDH-211ENST00000641213 HMGCS2P54868 508 aa18.56■□□□□ 0.56
PHGDH-211ENST00000641213 NCKAP1LP55160 1127 aa18.56■□□□□ 0.56
PHGDH-211ENST00000641213 NPEPPSP55786 919 aa18.56■□□□□ 0.56
PHGDH-211ENST00000641213 MRPS25P82663 173 aaKnown RBP18.56■□□□□ 0.56
PHGDH-211ENST00000641213 SLC7A5Q01650 507 aa18.56■□□□□ 0.56
PHGDH-211ENST00000641213 XKR9Q5GH70 373 aa18.56■□□□□ 0.56
PHGDH-211ENST00000641213 PLA2G4FQ68DD2 849 aa18.56■□□□□ 0.56
PHGDH-211ENST00000641213 SNRNP48Q6IEG0 339 aaKnown RBP18.56■□□□□ 0.56
PHGDH-211ENST00000641213 AENQ8WTP8 325 aaKnown RBP18.56■□□□□ 0.56
PHGDH-211ENST00000641213 INPP4AQ96PE3 977 aaPredicted RBP18.56■□□□□ 0.56
PHGDH-211ENST00000641213 SELENOOQ9BVL4 669 aa18.56■□□□□ 0.56
PHGDH-211ENST00000641213 ACBD3Q9H3P7 528 aa18.56■□□□□ 0.56
PHGDH-211ENST00000641213 HPCAL4Q9UM19 191 aa18.56■□□□□ 0.56
PHGDH-211ENST00000641213 DAAM1Q9Y4D1 1078 aa18.56■□□□□ 0.56
PHGDH-211ENST00000641213 EMSYQ7Z589 1322 aa18.56■□□□□ 0.56
PHGDH-211ENST00000641213 WDR90Q96KV7 1748 aa18.56■□□□□ 0.56
PHGDH-211ENST00000641213 A0A0A6YYK5 440 aaPredicted RBP18.56■□□□□ 0.56
PHGDH-211ENST00000641213 SLC16A4O15374 487 aa18.56■□□□□ 0.56
PHGDH-211ENST00000641213 NR3C2P08235 984 aa18.56■□□□□ 0.56
PHGDH-211ENST00000641213 CYP2C19P33261 490 aa18.56■□□□□ 0.56
PHGDH-211ENST00000641213 VAMP7P51809 220 aa18.56■□□□□ 0.56
PHGDH-211ENST00000641213 GYS2P54840 703 aa18.56■□□□□ 0.56
PHGDH-211ENST00000641213 PEX3P56589 373 aa18.56■□□□□ 0.56
PHGDH-211ENST00000641213 PHLDB3Q6NSJ2 640 aa18.56■□□□□ 0.56
PHGDH-211ENST00000641213 TPCN2Q8NHX9 752 aa18.56■□□□□ 0.56
PHGDH-211ENST00000641213 GDAP1L1Q96MZ0 367 aa18.56■□□□□ 0.56
PHGDH-211ENST00000641213 SYT11Q9BT88 431 aa18.56■□□□□ 0.56
PHGDH-211ENST00000641213 HSPBP1Q9NZL4 362 aa18.56■□□□□ 0.56
PHGDH-211ENST00000641213 ZKSCAN7Q9P0L1 754 aaPredicted RBP18.56■□□□□ 0.56
PHGDH-211ENST00000641213 STIM2Q9P246 746 aa18.56■□□□□ 0.56
PHGDH-211ENST00000641213 ADAMTS5Q9UNA0 930 aa18.56■□□□□ 0.56
PHGDH-211ENST00000641213 LOC285556D6RIA3 1793 aa18.55■□□□□ 0.56
PHGDH-211ENST00000641213 DSG3P32926 999 aa18.55■□□□□ 0.56
PHGDH-211ENST00000641213 RPS6KA1Q15418 735 aa18.55■□□□□ 0.56
PHGDH-211ENST00000641213 GLE1Q53GS7 698 aaKnown RBP18.55■□□□□ 0.56
PHGDH-211ENST00000641213 ANGEL2Q5VTE6 544 aaKnown RBP18.55■□□□□ 0.56
PHGDH-211ENST00000641213 C8orf74Q6P047 294 aa18.55■□□□□ 0.56
PHGDH-211ENST00000641213 XXYLT1Q8NBI6 393 aa18.55■□□□□ 0.56
PHGDH-211ENST00000641213 ZSWIM2Q8NEG5 633 aa18.55■□□□□ 0.56
PHGDH-211ENST00000641213 CCDC102AQ96A19 550 aa18.55■□□□□ 0.56
PHGDH-211ENST00000641213 GPRASP2Q96D09 838 aa18.55■□□□□ 0.56
PHGDH-211ENST00000641213 C12orf42Q96LP6 360 aa18.55■□□□□ 0.56
PHGDH-211ENST00000641213 MOV10L1Q9BXT6 1211 aaKnown RBP18.55■□□□□ 0.56
PHGDH-211ENST00000641213 GOLPH3Q9H4A6 298 aa18.55■□□□□ 0.56
PHGDH-211ENST00000641213 ZHX1Q9UKY1 873 aaPredicted RBP18.55■□□□□ 0.56
PHGDH-211ENST00000641213 ZNF214Q9UL59 606 aaPredicted RBP18.55■□□□□ 0.56
PHGDH-211ENST00000641213 ZNF541Q9H0D2 1346 aa18.55■□□□□ 0.56
PHGDH-211ENST00000641213 CES2O00748 559 aa18.54■□□□□ 0.56
PHGDH-211ENST00000641213 KIF4AO95239 1232 aa18.54■□□□□ 0.56
PHGDH-211ENST00000641213 LMNB1P20700 586 aa18.54■□□□□ 0.56
PHGDH-211ENST00000641213 OAZ1P54368 228 aa18.54■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms