RNA–Protein interactions for RNA: ENST00000640957.1

SCARB2-227, Transcript of scavenger receptor class B member 2, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCARB2, Length 3,255 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-227ENST00000640957 BSDC1Q9NW68 430 aaPredicted RBP14.83□□□□□ -0.03
SCARB2-227ENST00000640957 SEC63Q9UGP8 760 aaKnown RBP14.83□□□□□ -0.03
SCARB2-227ENST00000640957 DISP2A7MBM2 1401 aa14.83□□□□□ -0.04
SCARB2-227ENST00000640957 TRPM3Q9HCF6 1732 aaPredicted RBP14.83□□□□□ -0.04
SCARB2-227ENST00000640957 MYH4Q9Y623 1939 aa14.83□□□□□ -0.04
SCARB2-227ENST00000640957 UBAP1LF5GYI3 381 aa14.83□□□□□ -0.04
SCARB2-227ENST00000640957 PPFIA2O75334 1257 aa14.83□□□□□ -0.04
SCARB2-227ENST00000640957 NEFHP12036 1026 aa14.83□□□□□ -0.04
SCARB2-227ENST00000640957 STX2P32856 288 aa14.83□□□□□ -0.04
SCARB2-227ENST00000640957 KLRC3Q07444 240 aa14.83□□□□□ -0.04
SCARB2-227ENST00000640957 DNAJC3Q13217 504 aa14.83□□□□□ -0.04
SCARB2-227ENST00000640957 GRIK5Q16478 980 aa14.83□□□□□ -0.04
SCARB2-227ENST00000640957 KYNUQ16719 465 aa14.83□□□□□ -0.04
SCARB2-227ENST00000640957 TTC27Q6P3X3 843 aa14.83□□□□□ -0.04
SCARB2-227ENST00000640957 GPBP1Q86WP2 473 aa14.83□□□□□ -0.04
SCARB2-227ENST00000640957 ZDHHC14Q8IZN3 488 aa14.83□□□□□ -0.04
SCARB2-227ENST00000640957 CYP4X1Q8N118 509 aa14.83□□□□□ -0.04
SCARB2-227ENST00000640957 RAD54LQ92698 747 aa14.83□□□□□ -0.04
SCARB2-227ENST00000640957 TMEM47Q9BQJ4 181 aa14.83□□□□□ -0.04
SCARB2-227ENST00000640957 NSRP1Q9H0G5 558 aaKnown RBP14.83□□□□□ -0.04
SCARB2-227ENST00000640957 GANQ9H2C0 597 aa14.83□□□□□ -0.04
SCARB2-227ENST00000640957 WDR91A4D1P6 747 aa14.83□□□□□ -0.04
SCARB2-227ENST00000640957 M0R2N6 131 aa14.83□□□□□ -0.04
SCARB2-227ENST00000640957 LRRC63Q05C16 580 aa14.83□□□□□ -0.04
SCARB2-227ENST00000640957 CTTNQ14247 550 aaKnown RBP14.83□□□□□ -0.04
SCARB2-227ENST00000640957 MESDQ14696 234 aa14.83□□□□□ -0.04
SCARB2-227ENST00000640957 TBC1D10BQ4KMP7 808 aaPredicted RBP14.83□□□□□ -0.04
SCARB2-227ENST00000640957 CRELD2Q6UXH1 353 aaPredicted RBP14.83□□□□□ -0.04
SCARB2-227ENST00000640957 AMIGO3Q86WK7 504 aa14.83□□□□□ -0.04
SCARB2-227ENST00000640957 C1orf54Q8WWF1 131 aa14.83□□□□□ -0.04
SCARB2-227ENST00000640957 EMILIN3Q9NT22 766 aa14.83□□□□□ -0.04
SCARB2-227ENST00000640957 ZDHHC18Q9NUE0 388 aa14.83□□□□□ -0.04
SCARB2-227ENST00000640957 ARMCX3Q9UH62 379 aaPredicted RBP14.83□□□□□ -0.04
SCARB2-227ENST00000640957 CORO1CQ9ULV4 474 aaPredicted RBP14.83□□□□□ -0.04
SCARB2-227ENST00000640957 LRRD1A4D1F6 860 aa14.82□□□□□ -0.04
SCARB2-227ENST00000640957 ZC2HC1CQ53FD0 456 aaPredicted RBP14.82□□□□□ -0.04
SCARB2-227ENST00000640957 NSMFQ6X4W1 530 aa14.82□□□□□ -0.04
SCARB2-227ENST00000640957 APBB1IPQ7Z5R6 666 aaPredicted RBP14.82□□□□□ -0.04
SCARB2-227ENST00000640957 REXO1Q8N1G1 1221 aaKnown RBP14.82□□□□□ -0.04
SCARB2-227ENST00000640957 SCFD1Q8WVM8 642 aa14.82□□□□□ -0.04
SCARB2-227ENST00000640957 CFAP73A6NFT4 308 aa14.82□□□□□ -0.04
SCARB2-227ENST00000640957 BRAFP15056 766 aa14.82□□□□□ -0.04
SCARB2-227ENST00000640957 RCAN1P53805 252 aa14.82□□□□□ -0.04
SCARB2-227ENST00000640957 CYP4A11Q02928 519 aa14.82□□□□□ -0.04
SCARB2-227ENST00000640957 PABPC4Q13310 644 aaKnown RBP eCLIP14.82□□□□□ -0.04
SCARB2-227ENST00000640957 ITIH4Q14624 930 aa14.82□□□□□ -0.04
SCARB2-227ENST00000640957 ECHDC2Q86YB7 292 aa14.82□□□□□ -0.04
SCARB2-227ENST00000640957 RAB17Q9H0T7 212 aa14.82□□□□□ -0.04
SCARB2-227ENST00000640957 GCNT4Q9P109 453 aa14.82□□□□□ -0.04
SCARB2-227ENST00000640957 LRP6O75581 1613 aa14.81□□□□□ -0.04
SCARB2-227ENST00000640957 KLHL33A6NCF5 533 aa14.81□□□□□ -0.04
SCARB2-227ENST00000640957 KIAA0391O15091 583 aaKnown RBP14.81□□□□□ -0.04
SCARB2-227ENST00000640957 FLOT1O75955 427 aa14.81□□□□□ -0.04
SCARB2-227ENST00000640957 BAG3O95817 575 aa14.81□□□□□ -0.04
SCARB2-227ENST00000640957 PON1P27169 355 aa14.81□□□□□ -0.04
SCARB2-227ENST00000640957 IKQ13123 557 aaPredicted RBP14.81□□□□□ -0.04
SCARB2-227ENST00000640957 TRIM59Q8IWR1 403 aa14.81□□□□□ -0.04
SCARB2-227ENST00000640957 LRRC47Q8N1G4 583 aaKnown RBP14.81□□□□□ -0.04
SCARB2-227ENST00000640957 ANKLE1Q8NAG6 615 aa14.81□□□□□ -0.04
SCARB2-227ENST00000640957 MYLK2Q9H1R3 596 aa14.81□□□□□ -0.04
SCARB2-227ENST00000640957 ANAPC4Q9UJX5 808 aa14.81□□□□□ -0.04
SCARB2-227ENST00000640957 POTEFA5A3E0 1075 aa14.81□□□□□ -0.04
SCARB2-227ENST00000640957 RSPH10B2B2RC85 870 aa14.81□□□□□ -0.04
SCARB2-227ENST00000640957 UFL1O94874 794 aa14.81□□□□□ -0.04
SCARB2-227ENST00000640957 MYL1P05976 194 aa14.81□□□□□ -0.04
SCARB2-227ENST00000640957 RSPH10BP0C881 870 aa14.81□□□□□ -0.04
SCARB2-227ENST00000640957 ZCCHC18P0CG32 403 aa14.81□□□□□ -0.04
SCARB2-227ENST00000640957 POTEIP0CG38 1075 aa14.81□□□□□ -0.04
SCARB2-227ENST00000640957 RWDD2BP57060 319 aa14.81□□□□□ -0.04
SCARB2-227ENST00000640957 BNIP1Q12981 228 aa14.81□□□□□ -0.04
SCARB2-227ENST00000640957 MUM1Q2TAK8 710 aa14.81□□□□□ -0.04
SCARB2-227ENST00000640957 DAB2IPQ5VWQ8 1189 aa14.81□□□□□ -0.04
SCARB2-227ENST00000640957 POTEGQ6S5H5 508 aa14.81□□□□□ -0.04
SCARB2-227ENST00000640957 POTEEQ6S8J3 1075 aa14.81□□□□□ -0.04
SCARB2-227ENST00000640957 KIAA0825Q8IV33 1275 aa14.81□□□□□ -0.04
SCARB2-227ENST00000640957 C1orf131Q8NDD1 294 aaKnown RBP14.81□□□□□ -0.04
SCARB2-227ENST00000640957 ATG4AQ8WYN0 398 aa14.81□□□□□ -0.04
SCARB2-227ENST00000640957 RPGRQ92834 1020 aaKnown RBP14.81□□□□□ -0.04
SCARB2-227ENST00000640957 ALG13Q9NP73 1137 aaKnown RBP14.81□□□□□ -0.04
SCARB2-227ENST00000640957 CCDC188H7C350 402 aa14.81□□□□□ -0.04
SCARB2-227ENST00000640957 TOM1O60784 492 aa14.81□□□□□ -0.04
SCARB2-227ENST00000640957 CNGA1P29973 690 aa14.81□□□□□ -0.04
SCARB2-227ENST00000640957 CHKAP35790 457 aa14.81□□□□□ -0.04
SCARB2-227ENST00000640957 SLC16A2P36021 539 aa14.81□□□□□ -0.04
SCARB2-227ENST00000640957 RPS6KA3P51812 740 aa14.81□□□□□ -0.04
SCARB2-227ENST00000640957 DUPD1Q68J44 220 aa14.81□□□□□ -0.04
SCARB2-227ENST00000640957 FAM196AQ6ZSG2 479 aa14.81□□□□□ -0.04
SCARB2-227ENST00000640957 CCNJLQ8IV13 435 aa14.81□□□□□ -0.04
SCARB2-227ENST00000640957 LNX1Q8TBB1 728 aaPredicted RBP14.81□□□□□ -0.04
SCARB2-227ENST00000640957 FBF1Q8TES7 1133 aa14.81□□□□□ -0.04
SCARB2-227ENST00000640957 CTNNBL1Q8WYA6 563 aaPredicted RBP14.81□□□□□ -0.04
SCARB2-227ENST00000640957 C12orf65Q9H3J6 166 aaKnown RBP14.81□□□□□ -0.04
SCARB2-227ENST00000640957 KLHL14Q9P2G3 628 aa14.81□□□□□ -0.04
SCARB2-227ENST00000640957 DDX52Q9Y2R4 599 aaKnown RBP eCLIP14.81□□□□□ -0.04
SCARB2-227ENST00000640957 PFASO15067 1338 aa14.81□□□□□ -0.04
SCARB2-227ENST00000640957 CETN3O15182 167 aa14.8□□□□□ -0.04
SCARB2-227ENST00000640957 ETS2P15036 469 aa14.8□□□□□ -0.04
SCARB2-227ENST00000640957 TAL1P17542 331 aaPredicted RBP14.8□□□□□ -0.04
SCARB2-227ENST00000640957 PSMC6P62333 389 aa14.8□□□□□ -0.04
SCARB2-227ENST00000640957 TMEM266Q2M3C6 531 aa14.8□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms