RNA–Protein interactions for RNA: ENST00000640900.1

SCARB2-225, Transcript of scavenger receptor class B member 2, humanhuman

TSL 2

Gene SCARB2, Length 531 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-225ENST00000640900 CCDC65Q8IXS2 484 aa10.09□□□□□ -0.79
SCARB2-225ENST00000640900 LRRC71Q8N4P6 559 aa10.09□□□□□ -0.79
SCARB2-225ENST00000640900 RETREG2Q8NC44 543 aa10.09□□□□□ -0.79
SCARB2-225ENST00000640900 KIAA0895Q8NCT3 520 aa10.09□□□□□ -0.79
SCARB2-225ENST00000640900 TMEM161BQ8NDZ6 487 aa10.09□□□□□ -0.79
SCARB2-225ENST00000640900 PPP1R13LQ8WUF5 828 aa10.09□□□□□ -0.79
SCARB2-225ENST00000640900 TCP11Q8WWU5 503 aa10.09□□□□□ -0.79
SCARB2-225ENST00000640900 PRPF31Q8WWY3 499 aaKnown RBP10.09□□□□□ -0.79
SCARB2-225ENST00000640900 PSPC1Q8WXF1 523 aaKnown RBP10.09□□□□□ -0.79
SCARB2-225ENST00000640900 ERCC4Q92889 916 aaPredicted RBP10.09□□□□□ -0.79
SCARB2-225ENST00000640900 WNT8BQ93098 351 aa10.09□□□□□ -0.79
SCARB2-225ENST00000640900 SMARCE1Q969G3 411 aa10.09□□□□□ -0.79
SCARB2-225ENST00000640900 SYAP1Q96A49 352 aaPredicted RBP10.09□□□□□ -0.79
SCARB2-225ENST00000640900 GTPBP4Q9BZE4 634 aaKnown RBP10.09□□□□□ -0.79
SCARB2-225ENST00000640900 POLR3FQ9H1D9 316 aaPredicted RBP10.09□□□□□ -0.79
SCARB2-225ENST00000640900 ADAMTS10Q9H324 1103 aa10.09□□□□□ -0.79
SCARB2-225ENST00000640900 PANK4Q9NVE7 773 aa10.09□□□□□ -0.79
SCARB2-225ENST00000640900 ARHGAP28Q9P2N2 729 aa10.09□□□□□ -0.79
SCARB2-225ENST00000640900 SUCLA2Q9P2R7 463 aaPredicted RBP10.09□□□□□ -0.79
SCARB2-225ENST00000640900 ADGRA3Q8IWK6 1321 aa10.08□□□□□ -0.8
SCARB2-225ENST00000640900 SFI1A8K8P3 1242 aa10.08□□□□□ -0.8
SCARB2-225ENST00000640900 LETM1O95202 739 aaPredicted RBP10.08□□□□□ -0.8
SCARB2-225ENST00000640900 EN2P19622 333 aaPredicted RBP10.08□□□□□ -0.8
SCARB2-225ENST00000640900 TMOD1P28289 359 aa10.08□□□□□ -0.8
SCARB2-225ENST00000640900 HOXD13P35453 343 aa10.08□□□□□ -0.8
SCARB2-225ENST00000640900 NAMPTP43490 491 aa10.08□□□□□ -0.8
SCARB2-225ENST00000640900 NPTX2P47972 431 aa10.08□□□□□ -0.8
SCARB2-225ENST00000640900 PTENP60484 403 aa10.08□□□□□ -0.8
SCARB2-225ENST00000640900 IGBP1P78318 339 aa10.08□□□□□ -0.8
SCARB2-225ENST00000640900 GTF2BQ00403 316 aa10.08□□□□□ -0.8
SCARB2-225ENST00000640900 MGAT3Q09327 533 aa10.08□□□□□ -0.8
SCARB2-225ENST00000640900 LAMTOR4Q0VGL1 99 aa10.08□□□□□ -0.8
SCARB2-225ENST00000640900 STK4Q13043 487 aa10.08□□□□□ -0.8
SCARB2-225ENST00000640900 PDAP1Q13442 181 aaKnown RBP10.08□□□□□ -0.8
SCARB2-225ENST00000640900 CAPSQ13938 189 aa10.08□□□□□ -0.8
SCARB2-225ENST00000640900 BMT2Q1RMZ1 405 aa10.08□□□□□ -0.8
SCARB2-225ENST00000640900 ZSCAN23Q3MJ62 389 aa10.08□□□□□ -0.8
SCARB2-225ENST00000640900 FAM102BQ5T8I3 360 aa10.08□□□□□ -0.8
SCARB2-225ENST00000640900 FOXR2Q6PJQ5 311 aa10.08□□□□□ -0.8
SCARB2-225ENST00000640900 TAS1R3Q7RTX0 852 aa10.08□□□□□ -0.8
SCARB2-225ENST00000640900 ZNF720Q7Z2F6 126 aa10.08□□□□□ -0.8
SCARB2-225ENST00000640900 SFR1Q86XK3 245 aa10.08□□□□□ -0.8
SCARB2-225ENST00000640900 SLC17A8Q8NDX2 589 aa10.08□□□□□ -0.8
SCARB2-225ENST00000640900 TMEM174Q8WUU8 243 aa10.08□□□□□ -0.8
SCARB2-225ENST00000640900 PAWRQ96IZ0 340 aaKnown RBP10.08□□□□□ -0.8
SCARB2-225ENST00000640900 CCDC43Q96MW1 224 aaKnown RBP10.08□□□□□ -0.8
SCARB2-225ENST00000640900 FGFBP2Q9BYJ0 223 aa10.08□□□□□ -0.8
SCARB2-225ENST00000640900 CCDC113Q9H0I3 377 aa10.08□□□□□ -0.8
SCARB2-225ENST00000640900 TRPV6Q9H1D0 765 aa10.08□□□□□ -0.8
SCARB2-225ENST00000640900 IFT122Q9HBG6 1241 aa10.08□□□□□ -0.8
SCARB2-225ENST00000640900 POLD4Q9HCU8 107 aa10.08□□□□□ -0.8
SCARB2-225ENST00000640900 TRMT13Q9NUP7 481 aaKnown RBP10.08□□□□□ -0.8
SCARB2-225ENST00000640900 RMND1Q9NWS8 449 aa10.08□□□□□ -0.8
SCARB2-225ENST00000640900 LARSQ9P2J5 1176 aaKnown RBP10.08□□□□□ -0.8
SCARB2-225ENST00000640900 KCNG1Q9UIX4 513 aa10.08□□□□□ -0.8
SCARB2-225ENST00000640900 MYH11P35749 1972 aa10.08□□□□□ -0.8
SCARB2-225ENST00000640900 MROH7Q68CQ1 1323 aa10.07□□□□□ -0.8
SCARB2-225ENST00000640900 SIP14410 1827 aa10.07□□□□□ -0.8
SCARB2-225ENST00000640900 PPP1R3GB7ZBB8 358 aa10.07□□□□□ -0.8
SCARB2-225ENST00000640900 EIF3DO15371 548 aaKnown RBP eCLIP10.07□□□□□ -0.8
SCARB2-225ENST00000640900 TBCAO75347 108 aaKnown RBP10.07□□□□□ -0.8
SCARB2-225ENST00000640900 FAM13AO94988 1023 aa10.07□□□□□ -0.8
SCARB2-225ENST00000640900 CYP2C9P11712 490 aa10.07□□□□□ -0.8
SCARB2-225ENST00000640900 DNM2P50570 870 aa10.07□□□□□ -0.8
SCARB2-225ENST00000640900 GPC3P51654 580 aa10.07□□□□□ -0.8
SCARB2-225ENST00000640900 CASP5P51878 434 aa10.07□□□□□ -0.8
SCARB2-225ENST00000640900 ZNF445P59923 1031 aa10.07□□□□□ -0.8
SCARB2-225ENST00000640900 RAD51AP2Q09MP3 1159 aa10.07□□□□□ -0.8
SCARB2-225ENST00000640900 PPP2R5AQ15172 486 aa10.07□□□□□ -0.8
SCARB2-225ENST00000640900 PTGISQ16647 500 aa10.07□□□□□ -0.8
SCARB2-225ENST00000640900 FAM187BQ17R55 369 aa10.07□□□□□ -0.8
SCARB2-225ENST00000640900 HERC4Q5GLZ8 1057 aaPredicted RBP10.07□□□□□ -0.8
SCARB2-225ENST00000640900 CT47A1Q5JQC4 288 aaPredicted RBP10.07□□□□□ -0.8
SCARB2-225ENST00000640900 FAM26FQ5R3K3 315 aa10.07□□□□□ -0.8
SCARB2-225ENST00000640900 ZNF658Q5TYW1 1059 aaPredicted RBP10.07□□□□□ -0.8
SCARB2-225ENST00000640900 NECAB2Q7Z6G3 386 aa10.07□□□□□ -0.8
SCARB2-225ENST00000640900 ZNF410Q86VK4 478 aa10.07□□□□□ -0.8
SCARB2-225ENST00000640900 GLIS3Q8NEA6 775 aa10.07□□□□□ -0.8
SCARB2-225ENST00000640900 ZNF507Q8TCN5 953 aa10.07□□□□□ -0.8
SCARB2-225ENST00000640900 SCFD1Q8WVM8 642 aa10.07□□□□□ -0.8
SCARB2-225ENST00000640900 HPS3Q969F9 1004 aa10.07□□□□□ -0.8
SCARB2-225ENST00000640900 ABHD8Q96I13 439 aa10.07□□□□□ -0.8
SCARB2-225ENST00000640900 SENP6Q9GZR1 1112 aaPredicted RBP10.07□□□□□ -0.8
SCARB2-225ENST00000640900 C11orf49Q9H6J7 331 aa10.07□□□□□ -0.8
SCARB2-225ENST00000640900 TMEM134Q9H6X4 195 aa10.07□□□□□ -0.8
SCARB2-225ENST00000640900 SUGCTQ9HAC7 445 aa10.07□□□□□ -0.8
SCARB2-225ENST00000640900 TBX21Q9UL17 535 aa10.07□□□□□ -0.8
SCARB2-225ENST00000640900 SQORQ9Y6N5 450 aa10.07□□□□□ -0.8
SCARB2-225ENST00000640900 PIGRP01833 764 aa10.06□□□□□ -0.8
SCARB2-225ENST00000640900 CHRNA1P02708 482 aa10.06□□□□□ -0.8
SCARB2-225ENST00000640900 VTNP04004 478 aa10.06□□□□□ -0.8
SCARB2-225ENST00000640900 KRT18P05783 430 aaKnown RBP10.06□□□□□ -0.8
SCARB2-225ENST00000640900 IQCF3P0C7M6 154 aa10.06□□□□□ -0.8
SCARB2-225ENST00000640900 IDEP14735 1019 aa10.06□□□□□ -0.8
SCARB2-225ENST00000640900 PEX3P56589 373 aa10.06□□□□□ -0.8
SCARB2-225ENST00000640900 NLRP12P59046 1061 aa10.06□□□□□ -0.8
SCARB2-225ENST00000640900 TLE2Q04725 743 aa10.06□□□□□ -0.8
SCARB2-225ENST00000640900 FAAP100Q0VG06 881 aa10.06□□□□□ -0.8
SCARB2-225ENST00000640900 DMP1Q13316 513 aaPredicted RBP10.06□□□□□ -0.8
SCARB2-225ENST00000640900 ALCAMQ13740 583 aa10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms