RNA–Protein interactions for RNA: ENST00000640648.1

NECAP1-227, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 5

Gene NECAP1, Length 5,166 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-227ENST00000640648 LRRC63Q05C16 580 aa8.82□□□□□ -1
NECAP1-227ENST00000640648 C2orf54Q08AI8 447 aa8.82□□□□□ -1
NECAP1-227ENST00000640648 CEP78Q5JTW2 689 aa8.82□□□□□ -1
NECAP1-227ENST00000640648 C1orf146Q5VVC0 180 aa8.82□□□□□ -1
NECAP1-227ENST00000640648 SYDE1Q6ZW31 735 aaPredicted RBP8.82□□□□□ -1
NECAP1-227ENST00000640648 ADAT2Q7Z6V5 191 aaKnown RBP8.82□□□□□ -1
NECAP1-227ENST00000640648 SCFD1Q8WVM8 642 aa8.82□□□□□ -1
NECAP1-227ENST00000640648 LSM14BQ9BX40 385 aaKnown RBP8.82□□□□□ -1
NECAP1-227ENST00000640648 MTO1Q9Y2Z2 717 aaKnown RBP8.82□□□□□ -1
NECAP1-227ENST00000640648 COPG1Q9Y678 874 aaKnown RBP8.82□□□□□ -1
NECAP1-227ENST00000640648 SETD1BQ9UPS6 1966 aaKnown RBP8.82□□□□□ -1
NECAP1-227ENST00000640648 MAP3K4Q9Y6R4 1608 aa8.82□□□□□ -1
NECAP1-227ENST00000640648 ECM2O94769 699 aaPredicted RBP8.82□□□□□ -1
NECAP1-227ENST00000640648 OCM2P0CE71 109 aa8.82□□□□□ -1
NECAP1-227ENST00000640648 OCMP0CE72 109 aaPredicted RBP8.82□□□□□ -1
NECAP1-227ENST00000640648 FOSL1P15407 271 aa8.82□□□□□ -1
NECAP1-227ENST00000640648 ABCB4P21439 1286 aa8.82□□□□□ -1
NECAP1-227ENST00000640648 EIF2B2P49770 351 aaKnown RBP8.82□□□□□ -1
NECAP1-227ENST00000640648 SCRN3Q0VDG4 424 aa8.82□□□□□ -1
NECAP1-227ENST00000640648 PARP6Q2NL67 630 aa8.82□□□□□ -1
NECAP1-227ENST00000640648 NEK10Q6ZWH5 1172 aa8.82□□□□□ -1
NECAP1-227ENST00000640648 TLK2Q86UE8 772 aa8.82□□□□□ -1
NECAP1-227ENST00000640648 RDH13Q8NBN7 331 aa8.82□□□□□ -1
NECAP1-227ENST00000640648 KCNV2Q8TDN2 545 aa8.82□□□□□ -1
NECAP1-227ENST00000640648 DQX1Q8TE96 717 aaKnown RBP8.82□□□□□ -1
NECAP1-227ENST00000640648 TUBGCP3Q96CW5 907 aa8.82□□□□□ -1
NECAP1-227ENST00000640648 OLFM1Q99784 485 aa8.82□□□□□ -1
NECAP1-227ENST00000640648 NACA2Q9H009 215 aa8.82□□□□□ -1
NECAP1-227ENST00000640648 ZSWIM5Q9P217 1185 aa8.82□□□□□ -1
NECAP1-227ENST00000640648 CROTQ9UKG9 612 aa8.82□□□□□ -1
NECAP1-227ENST00000640648 PCDHB13Q9Y5F0 798 aa8.82□□□□□ -1
NECAP1-227ENST00000640648 LRRC7Q96NW7 1537 aa8.82□□□□□ -1
NECAP1-227ENST00000640648 CNOT3O75175 753 aaKnown RBP8.82□□□□□ -1
NECAP1-227ENST00000640648 CLPTM1O96005 669 aa8.82□□□□□ -1
NECAP1-227ENST00000640648 CXCR5P32302 372 aa8.82□□□□□ -1
NECAP1-227ENST00000640648 TRMT5Q32P41 509 aaKnown RBP8.82□□□□□ -1
NECAP1-227ENST00000640648 CMPK2Q5EBM0 449 aa8.82□□□□□ -1
NECAP1-227ENST00000640648 KRT39Q6A163 491 aa8.82□□□□□ -1
NECAP1-227ENST00000640648 MARK2Q7KZI7 788 aaKnown RBP8.82□□□□□ -1
NECAP1-227ENST00000640648 DPH6Q7L8W6 267 aa8.82□□□□□ -1
NECAP1-227ENST00000640648 KIRREL3Q8IZU9 778 aa8.82□□□□□ -1
NECAP1-227ENST00000640648 ST13P5Q8NFI4 369 aaPredicted RBP8.82□□□□□ -1
NECAP1-227ENST00000640648 DGCR14Q96DF8 476 aaKnown RBP8.82□□□□□ -1
NECAP1-227ENST00000640648 KCNK16Q96T55 309 aa8.82□□□□□ -1
NECAP1-227ENST00000640648 TUBGCP2Q9BSJ2 902 aa8.82□□□□□ -1
NECAP1-227ENST00000640648 PRDM16Q9HAZ2 1276 aa8.82□□□□□ -1
NECAP1-227ENST00000640648 SAR1AQ9NR31 198 aa8.82□□□□□ -1
NECAP1-227ENST00000640648 STK17AQ9UEE5 414 aa8.82□□□□□ -1
NECAP1-227ENST00000640648 SNX12Q9UMY4 172 aa8.82□□□□□ -1
NECAP1-227ENST00000640648 MLH3Q9UHC1 1453 aa8.82□□□□□ -1
NECAP1-227ENST00000640648 MIF4GDA9UHW6 222 aaKnown RBP8.82□□□□□ -1
NECAP1-227ENST00000640648 H2AFZP0C0S5 128 aa8.82□□□□□ -1
NECAP1-227ENST00000640648 HDLBPQ00341 1268 aaKnown RBP8.82□□□□□ -1
NECAP1-227ENST00000640648 SLC34A1Q06495 639 aa8.82□□□□□ -1
NECAP1-227ENST00000640648 ARHGAP44Q17R89 818 aa8.82□□□□□ -1
NECAP1-227ENST00000640648 PPP4R4Q6NUP7 873 aa8.82□□□□□ -1
NECAP1-227ENST00000640648 H2AFVQ71UI9 128 aa8.82□□□□□ -1
NECAP1-227ENST00000640648 ZNF579Q8NAF0 562 aaKnown RBP8.82□□□□□ -1
NECAP1-227ENST00000640648 SPATA4Q8NEY3 305 aa8.82□□□□□ -1
NECAP1-227ENST00000640648 UHMK1Q8TAS1 419 aaKnown RBP8.82□□□□□ -1
NECAP1-227ENST00000640648 QKIQ96PU8 341 aaKnown RBP eCLIP8.82□□□□□ -1
NECAP1-227ENST00000640648 DDX28Q9NUL7 540 aaKnown RBP8.82□□□□□ -1
NECAP1-227ENST00000640648 MKL2Q9ULH7 1088 aa8.82□□□□□ -1
NECAP1-227ENST00000640648 SMNDC1O75940 238 aaKnown RBP eCLIP8.81□□□□□ -1
NECAP1-227ENST00000640648 TNFAIP8O95379 198 aa8.81□□□□□ -1
NECAP1-227ENST00000640648 TCHHL1Q5QJ38 904 aaPredicted RBP8.81□□□□□ -1
NECAP1-227ENST00000640648 TMEM63BQ5T3F8 832 aa8.81□□□□□ -1
NECAP1-227ENST00000640648 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP8.81□□□□□ -1
NECAP1-227ENST00000640648 PDZD8Q8NEN9 1154 aa8.81□□□□□ -1
NECAP1-227ENST00000640648 FADS3Q9Y5Q0 445 aa8.81□□□□□ -1
NECAP1-227ENST00000640648 SNX5Q9Y5X3 404 aa8.81□□□□□ -1
NECAP1-227ENST00000640648 IQGAP3Q86VI3 1631 aa8.81□□□□□ -1
NECAP1-227ENST00000640648 H0Y626 953 aa8.81□□□□□ -1
NECAP1-227ENST00000640648 SH2B2O14492 632 aaPredicted RBP8.81□□□□□ -1
NECAP1-227ENST00000640648 PDHBP11177 359 aa8.81□□□□□ -1
NECAP1-227ENST00000640648 ADD2P35612 726 aa8.81□□□□□ -1
NECAP1-227ENST00000640648 IFNAR2P48551 515 aa8.81□□□□□ -1
NECAP1-227ENST00000640648 POLR2FP61218 127 aaKnown RBP8.81□□□□□ -1
NECAP1-227ENST00000640648 CYP27A1Q02318 531 aa8.81□□□□□ -1
NECAP1-227ENST00000640648 SUZ12Q15022 739 aaKnown RBP8.81□□□□□ -1
NECAP1-227ENST00000640648 TMC5Q6UXY8 1006 aa8.81□□□□□ -1
NECAP1-227ENST00000640648 SRRM1Q8IYB3 904 aaKnown RBP8.81□□□□□ -1
NECAP1-227ENST00000640648 PM20D2Q8IYS1 436 aa8.81□□□□□ -1
NECAP1-227ENST00000640648 RNPC3Q96LT9 517 aaKnown RBP8.81□□□□□ -1
NECAP1-227ENST00000640648 DPH5Q9H2P9 285 aa8.81□□□□□ -1
NECAP1-227ENST00000640648 FOXP1Q9H334 677 aaPredicted RBP8.81□□□□□ -1
NECAP1-227ENST00000640648 TMBIM4Q9HC24 238 aa8.81□□□□□ -1
NECAP1-227ENST00000640648 UBN1Q9NPG3 1134 aa8.81□□□□□ -1
NECAP1-227ENST00000640648 GPR108Q9NPR9 543 aa8.81□□□□□ -1
NECAP1-227ENST00000640648 ABHD10Q9NUJ1 306 aa8.81□□□□□ -1
NECAP1-227ENST00000640648 STOML2Q9UJZ1 356 aa8.81□□□□□ -1
NECAP1-227ENST00000640648 ASAP1Q9ULH1 1129 aa8.81□□□□□ -1
NECAP1-227ENST00000640648 GCNT3O95395 438 aa8.81□□□□□ -1
NECAP1-227ENST00000640648 MMP1P03956 469 aa8.81□□□□□ -1
NECAP1-227ENST00000640648 PPP6R3Q5H9R7 873 aaPredicted RBP8.81□□□□□ -1
NECAP1-227ENST00000640648 KSR1Q8IVT5 923 aa8.81□□□□□ -1
NECAP1-227ENST00000640648 MREGQ8N565 214 aa8.81□□□□□ -1
NECAP1-227ENST00000640648 MGARPQ8TDB4 240 aa8.81□□□□□ -1
NECAP1-227ENST00000640648 CNOT6LQ96LI5 555 aaKnown RBP8.81□□□□□ -1
NECAP1-227ENST00000640648 TRIM56Q9BRZ2 755 aaKnown RBP8.81□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms