RNA–Protein interactions for RNA: ENST00000639880.1

HNRNPU-222, Transcript of heterogeneous nuclear ribonucleoprotein U, humanhuman

TSL 5

Gene HNRNPU, Length 4,239 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPU-222ENST00000639880 NEDD9Q14511 834 aa9.03□□□□□ -0.96
HNRNPU-222ENST00000639880 HADHQ16836 314 aaKnown RBP9.03□□□□□ -0.96
HNRNPU-222ENST00000639880 KLHDC7AQ5VTJ3 777 aa9.03□□□□□ -0.96
HNRNPU-222ENST00000639880 LMBRD2Q68DH5 695 aaPredicted RBP9.03□□□□□ -0.96
HNRNPU-222ENST00000639880 RNF207Q6ZRF8 634 aa9.03□□□□□ -0.96
HNRNPU-222ENST00000639880 LDHDQ86WU2 507 aa9.03□□□□□ -0.96
HNRNPU-222ENST00000639880 NCAPG2Q86XI2 1143 aa9.03□□□□□ -0.96
HNRNPU-222ENST00000639880 ZNF354CQ86Y25 554 aa9.03□□□□□ -0.96
HNRNPU-222ENST00000639880 ZBTB8OSQ8IWT0 167 aa9.03□□□□□ -0.96
HNRNPU-222ENST00000639880 USP38Q8NB14 1042 aa9.03□□□□□ -0.96
HNRNPU-222ENST00000639880 PPFIBP2Q8ND30 876 aa9.03□□□□□ -0.96
HNRNPU-222ENST00000639880 LRRC8CQ8TDW0 803 aa9.03□□□□□ -0.96
HNRNPU-222ENST00000639880 MICAL1Q8TDZ2 1067 aa9.03□□□□□ -0.96
HNRNPU-222ENST00000639880 C1orf54Q8WWF1 131 aa9.03□□□□□ -0.96
HNRNPU-222ENST00000639880 C11orf70Q9BRQ4 267 aa9.03□□□□□ -0.96
HNRNPU-222ENST00000639880 INO80BQ9C086 356 aaPredicted RBP9.03□□□□□ -0.96
HNRNPU-222ENST00000639880 SEL1LQ9UBV2 794 aa9.03□□□□□ -0.96
HNRNPU-222ENST00000639880 NAGPAQ9UK23 515 aa9.03□□□□□ -0.96
HNRNPU-222ENST00000639880 CNTNAP4Q9C0A0 1308 aa9.03□□□□□ -0.96
HNRNPU-222ENST00000639880 WDR91A4D1P6 747 aa9.03□□□□□ -0.96
HNRNPU-222ENST00000639880 P4HBP07237 508 aaKnown RBP9.03□□□□□ -0.96
HNRNPU-222ENST00000639880 TAL1P17542 331 aaPredicted RBP9.03□□□□□ -0.96
HNRNPU-222ENST00000639880 CHRNA5P30532 468 aa9.03□□□□□ -0.96
HNRNPU-222ENST00000639880 HSPA1LP34931 641 aa9.03□□□□□ -0.96
HNRNPU-222ENST00000639880 ITIH3Q06033 890 aa9.03□□□□□ -0.96
HNRNPU-222ENST00000639880 FIGNQ5HY92 759 aa9.03□□□□□ -0.96
HNRNPU-222ENST00000639880 SCARA5Q6ZMJ2 495 aa9.03□□□□□ -0.96
HNRNPU-222ENST00000639880 FAM47EQ6ZV65 393 aa9.03□□□□□ -0.96
HNRNPU-222ENST00000639880 SLC30A5Q8TAD4 765 aa9.03□□□□□ -0.96
HNRNPU-222ENST00000639880 HSD3B7Q9H2F3 369 aa9.03□□□□□ -0.96
HNRNPU-222ENST00000639880 SLITRK6Q9H5Y7 841 aa9.03□□□□□ -0.96
HNRNPU-222ENST00000639880 RAB21Q9UL25 225 aa9.03□□□□□ -0.96
HNRNPU-222ENST00000639880 NRXN3Q9Y4C0 1643 aa9.02□□□□□ -0.96
HNRNPU-222ENST00000639880 EXOC1LA0A1B0GW35 172 aa9.02□□□□□ -0.96
HNRNPU-222ENST00000639880 KRT1P04264 644 aa9.02□□□□□ -0.96
HNRNPU-222ENST00000639880 TROVE2P10155 538 aaKnown RBP eCLIP9.02□□□□□ -0.96
HNRNPU-222ENST00000639880 FGFR4P22455 802 aa9.02□□□□□ -0.96
HNRNPU-222ENST00000639880 IL9RQ01113 521 aa9.02□□□□□ -0.96
HNRNPU-222ENST00000639880 ADCY2Q08462 1091 aa9.02□□□□□ -0.96
HNRNPU-222ENST00000639880 CFAP157Q5JU67 520 aa9.02□□□□□ -0.96
HNRNPU-222ENST00000639880 FBXW10Q5XX13 1052 aa9.02□□□□□ -0.96
HNRNPU-222ENST00000639880 TRIM68Q6AZZ1 485 aa9.02□□□□□ -0.96
HNRNPU-222ENST00000639880 CCDC62Q6P9F0 684 aa9.02□□□□□ -0.96
HNRNPU-222ENST00000639880 MMS22LQ6ZRQ5 1243 aa9.02□□□□□ -0.96
HNRNPU-222ENST00000639880 KCNK18Q7Z418 384 aa9.02□□□□□ -0.96
HNRNPU-222ENST00000639880 BBOF1Q8ND07 529 aa9.02□□□□□ -0.96
HNRNPU-222ENST00000639880 RNF25Q96BH1 459 aaPredicted RBP9.02□□□□□ -0.96
HNRNPU-222ENST00000639880 CRAMP1Q96RY5 1269 aa9.02□□□□□ -0.96
HNRNPU-222ENST00000639880 CCT8L2Q96SF2 557 aa9.02□□□□□ -0.96
HNRNPU-222ENST00000639880 STK33Q9BYT3 514 aa9.02□□□□□ -0.96
HNRNPU-222ENST00000639880 AS3MTQ9HBK9 375 aa9.02□□□□□ -0.96
HNRNPU-222ENST00000639880 MRPL47Q9HD33 250 aaKnown RBP9.02□□□□□ -0.96
HNRNPU-222ENST00000639880 ADAM22Q9P0K1 906 aa9.02□□□□□ -0.96
HNRNPU-222ENST00000639880 TTC7AQ9ULT0 858 aaPredicted RBP9.02□□□□□ -0.96
HNRNPU-222ENST00000639880 TNNC2P02585 160 aa9.02□□□□□ -0.97
HNRNPU-222ENST00000639880 POLR2BP30876 1174 aaKnown RBP9.02□□□□□ -0.97
HNRNPU-222ENST00000639880 MDH1P40925 334 aaKnown RBP9.02□□□□□ -0.97
HNRNPU-222ENST00000639880 SESN3P58005 492 aa9.02□□□□□ -0.97
HNRNPU-222ENST00000639880 LRRC31Q6UY01 552 aa9.02□□□□□ -0.97
HNRNPU-222ENST00000639880 ARMC9Q7Z3E5 817 aa9.02□□□□□ -0.97
HNRNPU-222ENST00000639880 SRRM1Q8IYB3 904 aaKnown RBP9.02□□□□□ -0.97
HNRNPU-222ENST00000639880 CCDC110Q8TBZ0 833 aa9.02□□□□□ -0.97
HNRNPU-222ENST00000639880 SCFD1Q8WVM8 642 aa9.02□□□□□ -0.97
HNRNPU-222ENST00000639880 SREK1Q8WXA9 508 aaKnown RBP9.02□□□□□ -0.97
HNRNPU-222ENST00000639880 GJD4Q96KN9 370 aaPredicted RBP9.02□□□□□ -0.97
HNRNPU-222ENST00000639880 RILPQ96NA2 401 aa9.02□□□□□ -0.97
HNRNPU-222ENST00000639880 PNMA5Q96PV4 448 aa9.02□□□□□ -0.97
HNRNPU-222ENST00000639880 AGPAT1Q99943 283 aa9.02□□□□□ -0.97
HNRNPU-222ENST00000639880 CALN1Q9BXU9 219 aa9.02□□□□□ -0.97
HNRNPU-222ENST00000639880 TRIM6Q9C030 488 aaPredicted RBP9.02□□□□□ -0.97
HNRNPU-222ENST00000639880 FRMD4AQ9P2Q2 1039 aaPredicted RBP9.02□□□□□ -0.97
HNRNPU-222ENST00000639880 APEX2Q9UBZ4 518 aa9.02□□□□□ -0.97
HNRNPU-222ENST00000639880 TACC3Q9Y6A5 838 aa9.02□□□□□ -0.97
HNRNPU-222ENST00000639880 AFF2P51816 1311 aa9.02□□□□□ -0.97
HNRNPU-222ENST00000639880 SRGAP2CP0DJJ0 459 aa9.02□□□□□ -0.97
HNRNPU-222ENST00000639880 LSP1P33241 339 aa9.02□□□□□ -0.97
HNRNPU-222ENST00000639880 MAN1A1P33908 653 aa9.02□□□□□ -0.97
HNRNPU-222ENST00000639880 PHBP35232 272 aa9.02□□□□□ -0.97
HNRNPU-222ENST00000639880 YWHAGP61981 247 aaKnown RBP eCLIP9.02□□□□□ -0.97
HNRNPU-222ENST00000639880 PSMC6P62333 389 aa9.02□□□□□ -0.97
HNRNPU-222ENST00000639880 FUT2Q10981 343 aa9.02□□□□□ -0.97
HNRNPU-222ENST00000639880 ICE2Q659A1 982 aa9.02□□□□□ -0.97
HNRNPU-222ENST00000639880 DCAF15Q66K64 600 aa9.02□□□□□ -0.97
HNRNPU-222ENST00000639880 DNAJC24Q6P3W2 148 aa9.02□□□□□ -0.97
HNRNPU-222ENST00000639880 TMEM270Q6UE05 265 aa9.02□□□□□ -0.97
HNRNPU-222ENST00000639880 ARHGEF18Q6ZSZ5 1173 aa9.02□□□□□ -0.97
HNRNPU-222ENST00000639880 SLC17A8Q8NDX2 589 aa9.02□□□□□ -0.97
HNRNPU-222ENST00000639880 NYAP2Q9P242 653 aa9.02□□□□□ -0.97
HNRNPU-222ENST00000639880 SUGT1Q9Y2Z0 365 aa9.02□□□□□ -0.97
HNRNPU-222ENST00000639880 WDR64B1ANS9 1081 aa9.01□□□□□ -0.97
HNRNPU-222ENST00000639880 ATMINO43313 823 aaPredicted RBP9.01□□□□□ -0.97
HNRNPU-222ENST00000639880 GLI1P08151 1106 aa9.01□□□□□ -0.97
HNRNPU-222ENST00000639880 CA4P22748 312 aa9.01□□□□□ -0.97
HNRNPU-222ENST00000639880 YARSP54577 528 aaKnown RBP9.01□□□□□ -0.97
HNRNPU-222ENST00000639880 KRT81Q14533 505 aa9.01□□□□□ -0.97
HNRNPU-222ENST00000639880 EPHA7Q15375 998 aa9.01□□□□□ -0.97
HNRNPU-222ENST00000639880 WDR59Q6PJI9 974 aa9.01□□□□□ -0.97
HNRNPU-222ENST00000639880 TRIM59Q8IWR1 403 aa9.01□□□□□ -0.97
HNRNPU-222ENST00000639880 SPATA20Q8TB22 786 aa9.01□□□□□ -0.97
HNRNPU-222ENST00000639880 TRIM11Q96F44 468 aa9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms