RNA–Protein interactions for RNA: ENST00000639871.1

VPS51-217, Transcript of VPS51, GARP complex subunit, humanhuman

TSL 5 BASIC

Gene VPS51, Length 243 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS51-217ENST00000639871 TNFRSF25Q93038 417 aa19.72■□□□□ 0.75
VPS51-217ENST00000639871 CDCA3Q99618 268 aaPredicted RBP19.72■□□□□ 0.75
VPS51-217ENST00000639871 TLE6Q9H808 572 aa19.72■□□□□ 0.75
VPS51-217ENST00000639871 PPP4R2Q9NY27 417 aa19.72■□□□□ 0.75
VPS51-217ENST00000639871 DACT1Q9NYF0 836 aa19.72■□□□□ 0.75
VPS51-217ENST00000639871 WRAP73Q9P2S5 460 aaPredicted RBP19.72■□□□□ 0.75
VPS51-217ENST00000639871 A0A087WZ62 844 aa19.71■□□□□ 0.75
VPS51-217ENST00000639871 FAM86C2PA6NEL3 165 aa19.71■□□□□ 0.75
VPS51-217ENST00000639871 DCXO43602 365 aa19.71■□□□□ 0.75
VPS51-217ENST00000639871 CSDE1O75534 798 aaKnown RBP19.71■□□□□ 0.75
VPS51-217ENST00000639871 NEFLP07196 543 aa19.71■□□□□ 0.75
VPS51-217ENST00000639871 DNM2P50570 870 aa19.71■□□□□ 0.75
VPS51-217ENST00000639871 SPIRE1Q08AE8 756 aa19.71■□□□□ 0.75
VPS51-217ENST00000639871 ERICH6BQ5W0A0 696 aa19.71■□□□□ 0.75
VPS51-217ENST00000639871 TMEM184AQ6ZMB5 413 aa19.71■□□□□ 0.75
VPS51-217ENST00000639871 PIK3AP1Q6ZUJ8 805 aa19.71■□□□□ 0.75
VPS51-217ENST00000639871 RBM23Q86U06 439 aaKnown RBP19.71■□□□□ 0.75
VPS51-217ENST00000639871 VN1R2Q8NFZ6 395 aa19.71■□□□□ 0.75
VPS51-217ENST00000639871 RSPH1Q8WYR4 309 aa19.71■□□□□ 0.75
VPS51-217ENST00000639871 POP1Q99575 1024 aaKnown RBP19.71■□□□□ 0.75
VPS51-217ENST00000639871 NAP1L4Q99733 375 aaKnown RBP19.71■□□□□ 0.75
VPS51-217ENST00000639871 FDXACB1Q9BRP7 624 aaPredicted RBP19.71■□□□□ 0.75
VPS51-217ENST00000639871 CYP26B1Q9NR63 512 aa19.71■□□□□ 0.75
VPS51-217ENST00000639871 SUCLA2Q9P2R7 463 aaPredicted RBP19.71■□□□□ 0.75
VPS51-217ENST00000639871 PPME1Q9Y570 386 aa19.71■□□□□ 0.75
VPS51-217ENST00000639871 PLXNA4Q9HCM2 1894 aa19.71■□□□□ 0.75
VPS51-217ENST00000639871 TRIOO75962 3097 aa19.7■□□□□ 0.74
VPS51-217ENST00000639871 FSD2A1L4K1 749 aa19.7■□□□□ 0.74
VPS51-217ENST00000639871 DTNBO60941 627 aa19.7■□□□□ 0.74
VPS51-217ENST00000639871 P4HBP07237 508 aaKnown RBP19.7■□□□□ 0.74
VPS51-217ENST00000639871 PPM1AP35813 382 aa19.7■□□□□ 0.74
VPS51-217ENST00000639871 PLA2G5P39877 138 aa19.7■□□□□ 0.74
VPS51-217ENST00000639871 PHKA2P46019 1235 aa19.7■□□□□ 0.74
VPS51-217ENST00000639871 PLA2G4FQ68DD2 849 aa19.7■□□□□ 0.74
VPS51-217ENST00000639871 MICAL1Q8TDZ2 1067 aa19.7■□□□□ 0.74
VPS51-217ENST00000639871 ZNF558Q96NG5 402 aa19.7■□□□□ 0.74
VPS51-217ENST00000639871 SCLT1Q96NL6 688 aa19.7■□□□□ 0.74
VPS51-217ENST00000639871 JPH2Q9BR39 696 aaPredicted RBP19.7■□□□□ 0.74
VPS51-217ENST00000639871 DHX33Q9H6R0 707 aaKnown RBP19.7■□□□□ 0.74
VPS51-217ENST00000639871 IFT122Q9HBG6 1241 aa19.7■□□□□ 0.74
VPS51-217ENST00000639871 ORC3Q9UBD5 711 aaPredicted RBP19.7■□□□□ 0.74
VPS51-217ENST00000639871 BARX2Q9UMQ3 279 aaPredicted RBP19.7■□□□□ 0.74
VPS51-217ENST00000639871 PER2O15055 1255 aa19.69■□□□□ 0.74
VPS51-217ENST00000639871 CCNT1O60563 726 aaKnown RBP19.69■□□□□ 0.74
VPS51-217ENST00000639871 DKC1O60832 514 aaKnown RBP eCLIP19.69■□□□□ 0.74
VPS51-217ENST00000639871 ZNF623O75123 536 aa19.69■□□□□ 0.74
VPS51-217ENST00000639871 SFPQP23246 707 aaKnown RBP eCLIP19.69■□□□□ 0.74
VPS51-217ENST00000639871 NPEPPSP55786 919 aa19.69■□□□□ 0.74
VPS51-217ENST00000639871 EPHA7Q15375 998 aa19.69■□□□□ 0.74
VPS51-217ENST00000639871 ME3Q16798 604 aa19.69■□□□□ 0.74
VPS51-217ENST00000639871 HERC4Q5GLZ8 1057 aaPredicted RBP19.69■□□□□ 0.74
VPS51-217ENST00000639871 RHPN2Q8IUC4 686 aa19.69■□□□□ 0.74
VPS51-217ENST00000639871 C4orf19Q8IY42 314 aa19.69■□□□□ 0.74
VPS51-217ENST00000639871 ABI1Q8IZP0 508 aa19.69■□□□□ 0.74
VPS51-217ENST00000639871 SLC39A11Q8N1S5 342 aa19.69■□□□□ 0.74
VPS51-217ENST00000639871 ZNF579Q8NAF0 562 aaKnown RBP19.69■□□□□ 0.74
VPS51-217ENST00000639871 SUSD6Q92537 303 aa19.69■□□□□ 0.74
VPS51-217ENST00000639871 WASF1Q92558 559 aa19.69■□□□□ 0.74
VPS51-217ENST00000639871 GTF3C6Q969F1 213 aa19.69■□□□□ 0.74
VPS51-217ENST00000639871 INO80BQ9C086 356 aaPredicted RBP19.69■□□□□ 0.74
VPS51-217ENST00000639871 PUF60Q9UHX1 559 aaKnown RBP19.69■□□□□ 0.74
VPS51-217ENST00000639871 FAM205CA6NFA0 338 aa19.68■□□□□ 0.74
VPS51-217ENST00000639871 LARGE1O95461 756 aa19.68■□□□□ 0.74
VPS51-217ENST00000639871 PBX3P40426 434 aa19.68■□□□□ 0.74
VPS51-217ENST00000639871 RBM10P98175 930 aaKnown RBP19.68■□□□□ 0.74
VPS51-217ENST00000639871 NR5A1Q13285 461 aa19.68■□□□□ 0.74
VPS51-217ENST00000639871 CBX2Q14781 532 aaPredicted RBP19.68■□□□□ 0.74
VPS51-217ENST00000639871 POTEDQ86YR6 584 aa19.68■□□□□ 0.74
VPS51-217ENST00000639871 KSR1Q8IVT5 923 aa19.68■□□□□ 0.74
VPS51-217ENST00000639871 EXOC8Q8IYI6 725 aa19.68■□□□□ 0.74
VPS51-217ENST00000639871 MRPL9Q9BYD2 267 aaKnown RBP19.68■□□□□ 0.74
VPS51-217ENST00000639871 NGRNQ9NPE2 291 aaKnown RBP19.68■□□□□ 0.74
VPS51-217ENST00000639871 SPG21Q9NZD8 308 aa19.68■□□□□ 0.74
VPS51-217ENST00000639871 HIDE1A8MVS5 230 aa19.67■□□□□ 0.74
VPS51-217ENST00000639871 LOC730098B7Z3J9 87 aa19.67■□□□□ 0.74
VPS51-217ENST00000639871 NECAB1Q8N987 351 aa19.67■□□□□ 0.74
VPS51-217ENST00000639871 RNF169Q8NCN4 708 aa19.67■□□□□ 0.74
VPS51-217ENST00000639871 HELQQ8TDG4 1101 aa19.67■□□□□ 0.74
VPS51-217ENST00000639871 SLC7A3Q8WY07 619 aa19.67■□□□□ 0.74
VPS51-217ENST00000639871 TCF25Q9BQ70 676 aa19.67■□□□□ 0.74
VPS51-217ENST00000639871 LXNQ9BS40 222 aa19.67■□□□□ 0.74
VPS51-217ENST00000639871 HCN4Q9Y3Q4 1203 aa19.67■□□□□ 0.74
VPS51-217ENST00000639871 USP15Q9Y4E8 981 aaPredicted RBP19.67■□□□□ 0.74
VPS51-217ENST00000639871 SKIP12755 728 aa19.66■□□□□ 0.74
VPS51-217ENST00000639871 YWHABP31946 246 aaKnown RBP19.66■□□□□ 0.74
VPS51-217ENST00000639871 RFC5P40937 340 aa19.66■□□□□ 0.74
VPS51-217ENST00000639871 KRT17Q04695 432 aa19.66■□□□□ 0.74
VPS51-217ENST00000639871 RNF135Q8IUD6 432 aa19.66■□□□□ 0.74
VPS51-217ENST00000639871 SLFN12Q8IYM2 578 aa19.66■□□□□ 0.74
VPS51-217ENST00000639871 NSUN7Q8NE18 718 aaKnown RBP19.66■□□□□ 0.74
VPS51-217ENST00000639871 PRPF31Q8WWY3 499 aaKnown RBP19.66■□□□□ 0.74
VPS51-217ENST00000639871 CEP170P1Q96L14 293 aa19.66■□□□□ 0.74
VPS51-217ENST00000639871 S1PR5Q9H228 398 aa19.66■□□□□ 0.74
VPS51-217ENST00000639871 AGPAT5Q9NUQ2 364 aa19.66■□□□□ 0.74
VPS51-217ENST00000639871 FAM105AQ9NUU6 356 aa19.66■□□□□ 0.74
VPS51-217ENST00000639871 RGL1Q9NZL6 768 aa19.66■□□□□ 0.74
VPS51-217ENST00000639871 COL4A3BPQ9Y5P4 624 aa19.66■□□□□ 0.74
VPS51-217ENST00000639871 GAS2O43903 313 aaKnown RBP19.65■□□□□ 0.74
VPS51-217ENST00000639871 LYPLA2O95372 231 aa19.65■□□□□ 0.74
VPS51-217ENST00000639871 HOXA11P31270 313 aaPredicted RBP19.65■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms