RNA–Protein interactions for RNA: ENST00000639841.1

NECAP1-220, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 5

Gene NECAP1, Length 1,982 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-220ENST00000639841 TSPY3P0CV98 308 aa8.4□□□□□ -1.06
NECAP1-220ENST00000639841 TSPY8P0CW00 308 aa8.4□□□□□ -1.06
NECAP1-220ENST00000639841 LIFRP42702 1097 aa8.4□□□□□ -1.06
NECAP1-220ENST00000639841 ADKP55263 362 aaKnown RBP8.4□□□□□ -1.06
NECAP1-220ENST00000639841 CABP4P57796 275 aa8.4□□□□□ -1.06
NECAP1-220ENST00000639841 TSPY1Q01534 308 aa8.4□□□□□ -1.06
NECAP1-220ENST00000639841 TMEM177Q53S58 311 aa8.4□□□□□ -1.06
NECAP1-220ENST00000639841 ZNF697Q5TEC3 545 aa8.4□□□□□ -1.06
NECAP1-220ENST00000639841 CYFIP1Q7L576 1253 aa8.4□□□□□ -1.06
NECAP1-220ENST00000639841 COLGALT2Q8IYK4 626 aa8.4□□□□□ -1.06
NECAP1-220ENST00000639841 FLCNQ8NFG4 579 aa8.4□□□□□ -1.06
NECAP1-220ENST00000639841 MVB12AQ96EY5 273 aa8.4□□□□□ -1.06
NECAP1-220ENST00000639841 FMNL2Q96PY5 1086 aa8.4□□□□□ -1.06
NECAP1-220ENST00000639841 ZC3H12CQ9C0D7 883 aaKnown RBP8.4□□□□□ -1.06
NECAP1-220ENST00000639841 CABP5Q9NP86 173 aa8.4□□□□□ -1.06
NECAP1-220ENST00000639841 ODF2LQ9ULJ1 636 aa8.4□□□□□ -1.06
NECAP1-220ENST00000639841 CORO2BQ9UQ03 480 aa8.4□□□□□ -1.06
NECAP1-220ENST00000639841 USP42Q9H9J4 1324 aaKnown RBP8.4□□□□□ -1.06
NECAP1-220ENST00000639841 GOLGA8AA7E2F4 631 aa8.39□□□□□ -1.07
NECAP1-220ENST00000639841 GOLGA8BA8MQT2 603 aa8.39□□□□□ -1.07
NECAP1-220ENST00000639841 ARVCFO00192 962 aa8.39□□□□□ -1.07
NECAP1-220ENST00000639841 WNT7AO00755 349 aa8.39□□□□□ -1.07
NECAP1-220ENST00000639841 SHOXO15266 292 aa8.39□□□□□ -1.07
NECAP1-220ENST00000639841 KRT9P35527 623 aa8.39□□□□□ -1.07
NECAP1-220ENST00000639841 PDCD1Q15116 288 aa8.39□□□□□ -1.07
NECAP1-220ENST00000639841 MEA1Q16626 185 aa8.39□□□□□ -1.07
NECAP1-220ENST00000639841 CLEC16AQ2KHT3 1053 aa8.39□□□□□ -1.07
NECAP1-220ENST00000639841 FAM205BPQ63HN1 556 aa8.39□□□□□ -1.07
NECAP1-220ENST00000639841 GTF2IRD2BQ6EKJ0 949 aa8.39□□□□□ -1.07
NECAP1-220ENST00000639841 GTF2IRD2Q86UP8 949 aa8.39□□□□□ -1.07
NECAP1-220ENST00000639841 NRSN1Q8IZ57 195 aa8.39□□□□□ -1.07
NECAP1-220ENST00000639841 ADCY4Q8NFM4 1077 aa8.39□□□□□ -1.07
NECAP1-220ENST00000639841 ATP6V1E2Q96A05 226 aa8.39□□□□□ -1.07
NECAP1-220ENST00000639841 C1GALT1C1Q96EU7 318 aa8.39□□□□□ -1.07
NECAP1-220ENST00000639841 NT5C1BQ96P26 610 aa8.39□□□□□ -1.07
NECAP1-220ENST00000639841 LSM14BQ9BX40 385 aaKnown RBP8.39□□□□□ -1.07
NECAP1-220ENST00000639841 XPO4Q9C0E2 1151 aaKnown RBP8.39□□□□□ -1.07
NECAP1-220ENST00000639841 RNF181Q9P0P0 153 aa8.39□□□□□ -1.07
NECAP1-220ENST00000639841 FEZ2Q9UHY8 353 aaPredicted RBP8.39□□□□□ -1.07
NECAP1-220ENST00000639841 SOX13Q9UN79 622 aa8.39□□□□□ -1.07
NECAP1-220ENST00000639841 NRXN2Q9P2S2 1712 aa8.39□□□□□ -1.07
NECAP1-220ENST00000639841 A0A0G2JLW4 131 aa8.39□□□□□ -1.07
NECAP1-220ENST00000639841 FSD2A1L4K1 749 aa8.39□□□□□ -1.07
NECAP1-220ENST00000639841 PTPDC1A2A3K4 754 aa8.39□□□□□ -1.07
NECAP1-220ENST00000639841 A6NLC8 198 aa8.39□□□□□ -1.07
NECAP1-220ENST00000639841 SNX16P57768 344 aa8.39□□□□□ -1.07
NECAP1-220ENST00000639841 DCAF7P61962 342 aa8.39□□□□□ -1.07
NECAP1-220ENST00000639841 PDE4BQ07343 736 aa8.39□□□□□ -1.07
NECAP1-220ENST00000639841 CNN3Q15417 329 aaKnown RBP8.39□□□□□ -1.07
NECAP1-220ENST00000639841 SAMD5Q5TGI4 173 aa8.39□□□□□ -1.07
NECAP1-220ENST00000639841 TXNDC11Q6PKC3 985 aa8.39□□□□□ -1.07
NECAP1-220ENST00000639841 TMCO3Q6UWJ1 677 aa8.39□□□□□ -1.07
NECAP1-220ENST00000639841 HDXQ7Z353 690 aa8.39□□□□□ -1.07
NECAP1-220ENST00000639841 SNX21Q969T3 373 aa8.39□□□□□ -1.07
NECAP1-220ENST00000639841 WASH6PQ9NQA3 447 aa8.39□□□□□ -1.07
NECAP1-220ENST00000639841 ADAM30Q9UKF2 790 aa8.39□□□□□ -1.07
NECAP1-220ENST00000639841 PPP1R9AQ9ULJ8 1098 aa8.39□□□□□ -1.07
NECAP1-220ENST00000639841 GPR34Q9UPC5 381 aa8.39□□□□□ -1.07
NECAP1-220ENST00000639841 PCDHA11Q9Y5I1 949 aa8.39□□□□□ -1.07
NECAP1-220ENST00000639841 SBF1O95248 1867 aa8.38□□□□□ -1.07
NECAP1-220ENST00000639841 TJP1Q07157 1748 aa8.38□□□□□ -1.07
NECAP1-220ENST00000639841 KCPQ6ZWJ8 1503 aa8.38□□□□□ -1.07
NECAP1-220ENST00000639841 RHPN2P1A8MT19 583 aa8.38□□□□□ -1.07
NECAP1-220ENST00000639841 RNF223E7ERA6 249 aa8.38□□□□□ -1.07
NECAP1-220ENST00000639841 RGS13O14921 159 aa8.38□□□□□ -1.07
NECAP1-220ENST00000639841 ADAMTS3O15072 1205 aa8.38□□□□□ -1.07
NECAP1-220ENST00000639841 KCNH1O95259 989 aa8.38□□□□□ -1.07
NECAP1-220ENST00000639841 ALDH2P05091 517 aa8.38□□□□□ -1.07
NECAP1-220ENST00000639841 ESRRAP11474 423 aaPredicted RBP8.38□□□□□ -1.07
NECAP1-220ENST00000639841 MMP14P50281 582 aa8.38□□□□□ -1.07
NECAP1-220ENST00000639841 MAPK10P53779 464 aa8.38□□□□□ -1.07
NECAP1-220ENST00000639841 BPIFB3P59826 476 aa8.38□□□□□ -1.07
NECAP1-220ENST00000639841 LSM11P83369 360 aaKnown RBP eCLIP8.38□□□□□ -1.07
NECAP1-220ENST00000639841 TAF12Q16514 161 aa8.38□□□□□ -1.07
NECAP1-220ENST00000639841 ZNF449Q6P9G9 518 aa8.38□□□□□ -1.07
NECAP1-220ENST00000639841 RFX8Q6ZV50 586 aa8.38□□□□□ -1.07
NECAP1-220ENST00000639841 TGFBRAP1Q8WUH2 860 aa8.38□□□□□ -1.07
NECAP1-220ENST00000639841 TRAPPC12Q8WVT3 735 aa8.38□□□□□ -1.07
NECAP1-220ENST00000639841 LRTOMTQ8WZ04 291 aa8.38□□□□□ -1.07
NECAP1-220ENST00000639841 PHKBQ93100 1093 aa8.38□□□□□ -1.07
NECAP1-220ENST00000639841 FERMT2Q96AC1 680 aa8.38□□□□□ -1.07
NECAP1-220ENST00000639841 TMEM41AQ96HV5 264 aa8.38□□□□□ -1.07
NECAP1-220ENST00000639841 RCC1LQ96I51 464 aaKnown RBP8.38□□□□□ -1.07
NECAP1-220ENST00000639841 ZSCAN31Q96LW9 406 aaPredicted RBP8.38□□□□□ -1.07
NECAP1-220ENST00000639841 SCN11AQ9UI33 1791 aa8.38□□□□□ -1.07
NECAP1-220ENST00000639841 TIAM2Q8IVF5 1701 aa8.38□□□□□ -1.07
NECAP1-220ENST00000639841 J3QW42 95 aa8.37□□□□□ -1.07
NECAP1-220ENST00000639841 PPM1BO75688 479 aa8.37□□□□□ -1.07
NECAP1-220ENST00000639841 ZIC2O95409 532 aaPredicted RBP8.37□□□□□ -1.07
NECAP1-220ENST00000639841 DNTTP04053 509 aa8.37□□□□□ -1.07
NECAP1-220ENST00000639841 MTHFD1P11586 935 aaKnown RBP8.37□□□□□ -1.07
NECAP1-220ENST00000639841 PTPRAP18433 802 aa8.37□□□□□ -1.07
NECAP1-220ENST00000639841 ITGA6P23229 1130 aa8.37□□□□□ -1.07
NECAP1-220ENST00000639841 GRK4P32298 578 aa8.37□□□□□ -1.07
NECAP1-220ENST00000639841 KCNJ6P48051 423 aa8.37□□□□□ -1.07
NECAP1-220ENST00000639841 AGFG1P52594 562 aaKnown RBP8.37□□□□□ -1.07
NECAP1-220ENST00000639841 CACNB3P54284 484 aa8.37□□□□□ -1.07
NECAP1-220ENST00000639841 PLCB4Q15147 1175 aa8.37□□□□□ -1.07
NECAP1-220ENST00000639841 HSF5Q4G112 596 aaPredicted RBP8.37□□□□□ -1.07
NECAP1-220ENST00000639841 ZNF530Q6P9A1 599 aaPredicted RBP8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms