RNA–Protein interactions for RNA: ENST00000639300.1

SCARB2-216, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 4,554 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-216ENST00000639300 SSU72P8A0A1W2PR75 194 aa15.48■□□□□ 0.07
SCARB2-216ENST00000639300 ABL1P00519 1130 aa15.48■□□□□ 0.07
SCARB2-216ENST00000639300 SLC12A2P55011 1212 aa15.48■□□□□ 0.07
SCARB2-216ENST00000639300 GPR162Q16538 588 aa15.48■□□□□ 0.07
SCARB2-216ENST00000639300 HIBCHQ6NVY1 386 aaPredicted RBP15.48■□□□□ 0.07
SCARB2-216ENST00000639300 ARHGAP24Q8N264 748 aa15.48■□□□□ 0.07
SCARB2-216ENST00000639300 KCTD6Q8NC69 237 aa15.48■□□□□ 0.07
SCARB2-216ENST00000639300 KLHL29Q96CT2 875 aa15.48■□□□□ 0.07
SCARB2-216ENST00000639300 TAF1DQ9H5J8 278 aaPredicted RBP15.48■□□□□ 0.07
SCARB2-216ENST00000639300 ATP6V0A4Q9HBG4 840 aa15.48■□□□□ 0.07
SCARB2-216ENST00000639300 MYO3BQ8WXR4 1341 aa15.48■□□□□ 0.07
SCARB2-216ENST00000639300 SYNGAP1Q96PV0 1343 aa15.48■□□□□ 0.07
SCARB2-216ENST00000639300 PODXLO00592 558 aa15.48■□□□□ 0.07
SCARB2-216ENST00000639300 CYP26A1O43174 497 aa15.48■□□□□ 0.07
SCARB2-216ENST00000639300 KLRC1P26715 233 aa15.48■□□□□ 0.07
SCARB2-216ENST00000639300 SESN3P58005 492 aa15.48■□□□□ 0.07
SCARB2-216ENST00000639300 PSMC5P62195 406 aa15.48■□□□□ 0.07
SCARB2-216ENST00000639300 PDE1BQ01064 536 aa15.48■□□□□ 0.07
SCARB2-216ENST00000639300 STXBP2Q15833 593 aa15.48■□□□□ 0.07
SCARB2-216ENST00000639300 HP1BP3Q5SSJ5 553 aaPredicted RBP15.48■□□□□ 0.07
SCARB2-216ENST00000639300 SLFN12LQ6IEE8 588 aa15.48■□□□□ 0.07
SCARB2-216ENST00000639300 MICAL1Q8TDZ2 1067 aa15.48■□□□□ 0.07
SCARB2-216ENST00000639300 RFFLQ8WZ73 363 aa15.48■□□□□ 0.07
SCARB2-216ENST00000639300 HEXIM2Q96MH2 286 aaKnown RBP15.48■□□□□ 0.07
SCARB2-216ENST00000639300 FAM49AQ9H0Q0 323 aaPredicted RBP15.48■□□□□ 0.07
SCARB2-216ENST00000639300 MCF2LO15068 1137 aa15.48■□□□□ 0.07
SCARB2-216ENST00000639300 DARS2Q6PI48 645 aaKnown RBP15.48■□□□□ 0.07
SCARB2-216ENST00000639300 NLRP7Q8WX94 980 aa15.48■□□□□ 0.07
SCARB2-216ENST00000639300 EHD2Q9NZN4 543 aa15.48■□□□□ 0.07
SCARB2-216ENST00000639300 POLLQ9UGP5 575 aa15.48■□□□□ 0.07
SCARB2-216ENST00000639300 ARHGAP42A6NI28 874 aa15.47■□□□□ 0.07
SCARB2-216ENST00000639300 MKRN4PQ13434 485 aaPredicted RBP15.47■□□□□ 0.07
SCARB2-216ENST00000639300 RINT1Q6NUQ1 792 aa15.47■□□□□ 0.07
SCARB2-216ENST00000639300 HHIPL2Q6UWX4 724 aa15.47■□□□□ 0.07
SCARB2-216ENST00000639300 LMNTD2Q8IXW0 634 aa15.47■□□□□ 0.07
SCARB2-216ENST00000639300 LACRTQ9GZZ8 138 aa15.47■□□□□ 0.07
SCARB2-216ENST00000639300 ELOA2Q8IYF1 753 aaPredicted RBP15.47■□□□□ 0.07
SCARB2-216ENST00000639300 HACE1Q8IYU2 909 aa15.47■□□□□ 0.07
SCARB2-216ENST00000639300 FBXO28Q9NVF7 368 aa15.47■□□□□ 0.07
SCARB2-216ENST00000639300 EVI5O60447 810 aa15.47■□□□□ 0.07
SCARB2-216ENST00000639300 TSNAXIP1Q2TAA8 658 aa15.47■□□□□ 0.07
SCARB2-216ENST00000639300 C6orf118Q5T5N4 469 aa15.47■□□□□ 0.07
SCARB2-216ENST00000639300 ARHGEF18Q6ZSZ5 1173 aa15.47■□□□□ 0.07
SCARB2-216ENST00000639300 RNPC3Q96LT9 517 aaKnown RBP15.47■□□□□ 0.07
SCARB2-216ENST00000639300 SLC4A9Q96Q91 983 aa15.47■□□□□ 0.07
SCARB2-216ENST00000639300 RPF1Q9H9Y2 349 aaKnown RBP15.47■□□□□ 0.07
SCARB2-216ENST00000639300 RBM12Q9NTZ6 932 aaKnown RBP15.47■□□□□ 0.07
SCARB2-216ENST00000639300 FBXL5Q9UKA1 691 aa15.47■□□□□ 0.07
SCARB2-216ENST00000639300 KIF20BQ96Q89 1820 aa15.47■□□□□ 0.07
SCARB2-216ENST00000639300 MYOM1P52179 1685 aa15.47■□□□□ 0.07
SCARB2-216ENST00000639300 CNTNAP4Q9C0A0 1308 aa15.47■□□□□ 0.07
SCARB2-216ENST00000639300 TXNDC9O14530 226 aa15.46■□□□□ 0.07
SCARB2-216ENST00000639300 MSH2P43246 934 aa15.46■□□□□ 0.07
SCARB2-216ENST00000639300 GRB10Q13322 594 aa15.46■□□□□ 0.07
SCARB2-216ENST00000639300 MAPK6Q16659 721 aa15.46■□□□□ 0.07
SCARB2-216ENST00000639300 MAP2K2P36507 400 aa15.46■□□□□ 0.07
SCARB2-216ENST00000639300 HMGCS2P54868 508 aa15.46■□□□□ 0.07
SCARB2-216ENST00000639300 ZNF667Q5HYK9 610 aa15.46■□□□□ 0.07
SCARB2-216ENST00000639300 SLC10A5Q5PT55 438 aa15.46■□□□□ 0.07
SCARB2-216ENST00000639300 TRIM68Q6AZZ1 485 aa15.46■□□□□ 0.07
SCARB2-216ENST00000639300 CCNI2Q6ZMN8 369 aaPredicted RBP15.46■□□□□ 0.07
SCARB2-216ENST00000639300 FBXL16Q8N461 479 aa15.46■□□□□ 0.07
SCARB2-216ENST00000639300 C1orf54Q8WWF1 131 aa15.46■□□□□ 0.07
SCARB2-216ENST00000639300 CNOT10Q9H9A5 744 aaKnown RBP15.46■□□□□ 0.07
SCARB2-216ENST00000639300 PCDHA10Q9Y5I2 948 aa15.46■□□□□ 0.07
SCARB2-216ENST00000639300 E2F4Q16254 413 aa15.46■□□□□ 0.07
SCARB2-216ENST00000639300 BARGINQ6ZT62 677 aa15.46■□□□□ 0.07
SCARB2-216ENST00000639300 CATSPER3Q86XQ3 398 aa15.46■□□□□ 0.07
SCARB2-216ENST00000639300 TMEM35BQ8NCS4 154 aa15.46■□□□□ 0.07
SCARB2-216ENST00000639300 SLC5A4Q9NY91 659 aa15.46■□□□□ 0.07
SCARB2-216ENST00000639300 CRCPO75575 148 aa15.46■□□□□ 0.06
SCARB2-216ENST00000639300 ZNF18P17022 549 aa15.46■□□□□ 0.06
SCARB2-216ENST00000639300 PSMA2P25787 234 aa15.46■□□□□ 0.06
SCARB2-216ENST00000639300 RPA1P27694 616 aa15.46■□□□□ 0.06
SCARB2-216ENST00000639300 FXR2P51116 673 aaKnown RBP eCLIP15.46■□□□□ 0.06
SCARB2-216ENST00000639300 CCNA1P78396 465 aa15.46■□□□□ 0.06
SCARB2-216ENST00000639300 TTI2Q6NXR4 508 aa15.46■□□□□ 0.06
SCARB2-216ENST00000639300 SLC30A5Q8TAD4 765 aa15.46■□□□□ 0.06
SCARB2-216ENST00000639300 ERGIC2Q96RQ1 377 aa15.46■□□□□ 0.06
SCARB2-216ENST00000639300 EFCC1Q9HA90 598 aa15.46■□□□□ 0.06
SCARB2-216ENST00000639300 SAYSD1Q9NPB0 183 aa15.46■□□□□ 0.06
SCARB2-216ENST00000639300 KBTBD4Q9NVX7 518 aa15.46■□□□□ 0.06
SCARB2-216ENST00000639300 PLAGL2Q9UPG8 496 aa15.46■□□□□ 0.06
SCARB2-216ENST00000639300 ESYT2A0FGR8 921 aa15.45■□□□□ 0.06
SCARB2-216ENST00000639300 MMEP08473 750 aa15.45■□□□□ 0.06
SCARB2-216ENST00000639300 EN1Q05925 392 aaPredicted RBP15.45■□□□□ 0.06
SCARB2-216ENST00000639300 BAATQ14032 418 aaPredicted RBP15.45■□□□□ 0.06
SCARB2-216ENST00000639300 PPP6R3Q5H9R7 873 aaPredicted RBP15.45■□□□□ 0.06
SCARB2-216ENST00000639300 TRIM59Q8IWR1 403 aa15.45■□□□□ 0.06
SCARB2-216ENST00000639300 PDIK1LQ8N165 341 aa15.45■□□□□ 0.06
SCARB2-216ENST00000639300 FBXL13Q8NEE6 735 aa15.45■□□□□ 0.06
SCARB2-216ENST00000639300 PYROXD1Q8WU10 500 aa15.45■□□□□ 0.06
SCARB2-216ENST00000639300 CFAP57Q96MR6 1250 aa15.45■□□□□ 0.06
SCARB2-216ENST00000639300 HOXC10Q9NYD6 342 aa15.45■□□□□ 0.06
SCARB2-216ENST00000639300 PCSK1NQ9UHG2 260 aa15.45■□□□□ 0.06
SCARB2-216ENST00000639300 ODF2LQ9ULJ1 636 aa15.45■□□□□ 0.06
SCARB2-216ENST00000639300 SALL1Q9NSC2 1324 aa15.45■□□□□ 0.06
SCARB2-216ENST00000639300 GOLGA8MH3BSY2 632 aa15.45■□□□□ 0.06
SCARB2-216ENST00000639300 VEGFAP15692 232 aaPredicted RBP15.45■□□□□ 0.06
SCARB2-216ENST00000639300 FMO5P49326 533 aa15.45■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms