RNA–Protein interactions for RNA: ENST00000639167.1

NECAP1-216, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 5 BASIC

Gene NECAP1, Length 2,197 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-216ENST00000639167 SH3GL2Q99962 352 aa11.52□□□□□ -0.56
NECAP1-216ENST00000639167 DDX47Q9H0S4 455 aaKnown RBP11.52□□□□□ -0.56
NECAP1-216ENST00000639167 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.52□□□□□ -0.56
NECAP1-216ENST00000639167 STK32BQ9NY57 414 aa11.52□□□□□ -0.56
NECAP1-216ENST00000639167 TAS2R14Q9NYV8 317 aa11.52□□□□□ -0.56
NECAP1-216ENST00000639167 KCND2Q9NZV8 630 aa11.52□□□□□ -0.56
NECAP1-216ENST00000639167 LCMT1Q9UIC8 334 aa11.52□□□□□ -0.56
NECAP1-216ENST00000639167 MYH11P35749 1972 aa11.52□□□□□ -0.56
NECAP1-216ENST00000639167 DHX15O43143 795 aaKnown RBP11.52□□□□□ -0.57
NECAP1-216ENST00000639167 OPA1O60313 960 aa11.52□□□□□ -0.57
NECAP1-216ENST00000639167 RPS6KA5O75582 802 aa11.52□□□□□ -0.57
NECAP1-216ENST00000639167 PPP1R37O75864 691 aa11.52□□□□□ -0.57
NECAP1-216ENST00000639167 ASNSP08243 561 aa11.52□□□□□ -0.57
NECAP1-216ENST00000639167 ITGA4P13612 1032 aa11.52□□□□□ -0.57
NECAP1-216ENST00000639167 EIF2AK2P19525 551 aaKnown RBP11.52□□□□□ -0.57
NECAP1-216ENST00000639167 ANXA13P27216 316 aa11.52□□□□□ -0.57
NECAP1-216ENST00000639167 ERVK-9P63128 1117 aa11.52□□□□□ -0.57
NECAP1-216ENST00000639167 PPP2R5AQ15172 486 aa11.52□□□□□ -0.57
NECAP1-216ENST00000639167 CFAP58Q5T655 872 aa11.52□□□□□ -0.57
NECAP1-216ENST00000639167 ALS2CLQ60I27 953 aa11.52□□□□□ -0.57
NECAP1-216ENST00000639167 KCTD16Q68DU8 428 aa11.52□□□□□ -0.57
NECAP1-216ENST00000639167 ZNF772Q68DY9 489 aaPredicted RBP11.52□□□□□ -0.57
NECAP1-216ENST00000639167 DDX42Q86XP3 938 aaKnown RBP eCLIP11.52□□□□□ -0.57
NECAP1-216ENST00000639167 PALB2Q86YC2 1186 aa11.52□□□□□ -0.57
NECAP1-216ENST00000639167 RTKN2Q8IZC4 609 aa11.52□□□□□ -0.57
NECAP1-216ENST00000639167 SLC35G2Q8TBE7 412 aa11.52□□□□□ -0.57
NECAP1-216ENST00000639167 SCFD2Q8WU76 684 aa11.52□□□□□ -0.57
NECAP1-216ENST00000639167 LMBR1Q8WVP7 490 aa11.52□□□□□ -0.57
NECAP1-216ENST00000639167 CBWD1Q9BRT8 395 aa11.52□□□□□ -0.57
NECAP1-216ENST00000639167 STRA6Q9BX79 667 aa11.52□□□□□ -0.57
NECAP1-216ENST00000639167 RABEP2Q9H5N1 569 aa11.52□□□□□ -0.57
NECAP1-216ENST00000639167 APEX2Q9UBZ4 518 aa11.52□□□□□ -0.57
NECAP1-216ENST00000639167 STXBP5LQ9Y2K9 1186 aa11.52□□□□□ -0.57
NECAP1-216ENST00000639167 EMSYQ7Z589 1322 aa11.52□□□□□ -0.57
NECAP1-216ENST00000639167 GOLGA8KD6RF30 607 aa11.51□□□□□ -0.57
NECAP1-216ENST00000639167 PGRMC1O00264 195 aaKnown RBP11.51□□□□□ -0.57
NECAP1-216ENST00000639167 FOXN3O00409 490 aaPredicted RBP11.51□□□□□ -0.57
NECAP1-216ENST00000639167 WNT10BO00744 389 aa11.51□□□□□ -0.57
NECAP1-216ENST00000639167 CES2O00748 559 aa11.51□□□□□ -0.57
NECAP1-216ENST00000639167 BUB1BO60566 1050 aaPredicted RBP11.51□□□□□ -0.57
NECAP1-216ENST00000639167 KRT14P02533 472 aa11.51□□□□□ -0.57
NECAP1-216ENST00000639167 P4HBP07237 508 aaKnown RBP11.51□□□□□ -0.57
NECAP1-216ENST00000639167 IVLP07476 585 aa11.51□□□□□ -0.57
NECAP1-216ENST00000639167 DPEP1P16444 411 aa11.51□□□□□ -0.57
NECAP1-216ENST00000639167 LMNB1P20700 586 aa11.51□□□□□ -0.57
NECAP1-216ENST00000639167 TNFAIP3P21580 790 aa11.51□□□□□ -0.57
NECAP1-216ENST00000639167 MRPS9P82933 396 aaKnown RBP11.51□□□□□ -0.57
NECAP1-216ENST00000639167 NNTQ13423 1086 aa11.51□□□□□ -0.57
NECAP1-216ENST00000639167 HLTFQ14527 1009 aaKnown RBP eCLIP11.51□□□□□ -0.57
NECAP1-216ENST00000639167 TKFCQ3LXA3 575 aa11.51□□□□□ -0.57
NECAP1-216ENST00000639167 SLFN11Q7Z7L1 901 aa11.51□□□□□ -0.57
NECAP1-216ENST00000639167 NT5DC3Q86UY8 548 aa11.51□□□□□ -0.57
NECAP1-216ENST00000639167 SH2D3CQ8N5H7 860 aa11.51□□□□□ -0.57
NECAP1-216ENST00000639167 ACTRT1Q8TDG2 376 aa11.51□□□□□ -0.57
NECAP1-216ENST00000639167 ARHGEF26Q96DR7 871 aa11.51□□□□□ -0.57
NECAP1-216ENST00000639167 GPRC5CQ9NQ84 441 aa11.51□□□□□ -0.57
NECAP1-216ENST00000639167 PGAP2Q9UHJ9 254 aa11.51□□□□□ -0.57
NECAP1-216ENST00000639167 RSPH14Q9UHP6 348 aa11.51□□□□□ -0.57
NECAP1-216ENST00000639167 PSME4Q14997 1843 aa11.51□□□□□ -0.57
NECAP1-216ENST00000639167 RPTORQ8N122 1335 aa11.51□□□□□ -0.57
NECAP1-216ENST00000639167 A0A0A6YYK5 440 aaPredicted RBP11.51□□□□□ -0.57
NECAP1-216ENST00000639167 KRIT1O00522 736 aa11.51□□□□□ -0.57
NECAP1-216ENST00000639167 MYCLP12524 364 aaPredicted RBP11.51□□□□□ -0.57
NECAP1-216ENST00000639167 KRT13P13646 458 aa11.51□□□□□ -0.57
NECAP1-216ENST00000639167 GCLMP48507 274 aa11.51□□□□□ -0.57
NECAP1-216ENST00000639167 PPP3CAQ08209 521 aa11.51□□□□□ -0.57
NECAP1-216ENST00000639167 SPP2Q13103 211 aa11.51□□□□□ -0.57
NECAP1-216ENST00000639167 PPFIA1Q13136 1202 aa11.51□□□□□ -0.57
NECAP1-216ENST00000639167 TNIP1Q15025 636 aa11.51□□□□□ -0.57
NECAP1-216ENST00000639167 ARHGEF19Q8IW93 802 aa11.51□□□□□ -0.57
NECAP1-216ENST00000639167 NIM1KQ8IY84 436 aa11.51□□□□□ -0.57
NECAP1-216ENST00000639167 LMO3Q8TAP4 145 aa11.51□□□□□ -0.57
NECAP1-216ENST00000639167 NEK9Q8TD19 979 aa11.51□□□□□ -0.57
NECAP1-216ENST00000639167 IPO4Q8TEX9 1081 aaKnown RBP11.51□□□□□ -0.57
NECAP1-216ENST00000639167 SLC20A1Q8WUM9 679 aa11.51□□□□□ -0.57
NECAP1-216ENST00000639167 TAAR1Q96RJ0 339 aa11.51□□□□□ -0.57
NECAP1-216ENST00000639167 BUD13Q9BRD0 619 aaKnown RBP eCLIP11.51□□□□□ -0.57
NECAP1-216ENST00000639167 AGO4Q9HCK5 861 aaKnown RBP11.51□□□□□ -0.57
NECAP1-216ENST00000639167 UBE2TQ9NPD8 197 aaPredicted RBP11.51□□□□□ -0.57
NECAP1-216ENST00000639167 LARSQ9P2J5 1176 aaKnown RBP11.51□□□□□ -0.57
NECAP1-216ENST00000639167 SUCLA2Q9P2R7 463 aaPredicted RBP11.51□□□□□ -0.57
NECAP1-216ENST00000639167 INTUQ9ULD6 942 aa11.51□□□□□ -0.57
NECAP1-216ENST00000639167 PPP1R9AQ9ULJ8 1098 aa11.51□□□□□ -0.57
NECAP1-216ENST00000639167 GOLGA8IPA6NC78 632 aa11.5□□□□□ -0.57
NECAP1-216ENST00000639167 GOLGA8JA6NMD2 632 aa11.5□□□□□ -0.57
NECAP1-216ENST00000639167 SART1O43290 800 aaKnown RBP11.5□□□□□ -0.57
NECAP1-216ENST00000639167 RARRES1P49788 294 aa11.5□□□□□ -0.57
NECAP1-216ENST00000639167 UGCGQ16739 394 aa11.5□□□□□ -0.57
NECAP1-216ENST00000639167 FKBP1CQ5VVH2 108 aa11.5□□□□□ -0.57
NECAP1-216ENST00000639167 NAA35Q5VZE5 725 aa11.5□□□□□ -0.57
NECAP1-216ENST00000639167 FAM83AQ86UY5 434 aa11.5□□□□□ -0.57
NECAP1-216ENST00000639167 SYCE1Q8N0S2 351 aa11.5□□□□□ -0.57
NECAP1-216ENST00000639167 PRPF38AQ8NAV1 312 aaKnown RBP11.5□□□□□ -0.57
NECAP1-216ENST00000639167 SYTL5Q8TDW5 730 aaPredicted RBP11.5□□□□□ -0.57
NECAP1-216ENST00000639167 CTNNBL1Q8WYA6 563 aaPredicted RBP11.5□□□□□ -0.57
NECAP1-216ENST00000639167 PIK3R5Q8WYR1 880 aa11.5□□□□□ -0.57
NECAP1-216ENST00000639167 PLCD4Q9BRC7 762 aa11.5□□□□□ -0.57
NECAP1-216ENST00000639167 SYT11Q9BT88 431 aa11.5□□□□□ -0.57
NECAP1-216ENST00000639167 THAP2Q9H0W7 228 aa11.5□□□□□ -0.57
NECAP1-216ENST00000639167 AMFRQ9UKV5 643 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms