RNA–Protein interactions for RNA: ENST00000638848.1

KCNMA1-246, Transcript of potassium calcium-activated channel subfamily M alpha 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene KCNMA1, Length 4,423 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNMA1-246ENST00000638848 TMEM119Q4V9L6 283 aa12.3□□□□□ -0.44
KCNMA1-246ENST00000638848 SWT1Q5T5J6 900 aaKnown RBP12.3□□□□□ -0.44
KCNMA1-246ENST00000638848 ZNF622Q969S3 477 aaKnown RBP eCLIP12.3□□□□□ -0.44
KCNMA1-246ENST00000638848 RNF14Q9UBS8 474 aa12.3□□□□□ -0.44
KCNMA1-246ENST00000638848 COL18A1P39060 1754 aa12.3□□□□□ -0.44
KCNMA1-246ENST00000638848 PNMA6FA0A0J9YX94 578 aa12.29□□□□□ -0.44
KCNMA1-246ENST00000638848 NAIF1Q69YI7 327 aaPredicted RBP12.29□□□□□ -0.44
KCNMA1-246ENST00000638848 ZNF449Q6P9G9 518 aa12.29□□□□□ -0.44
KCNMA1-246ENST00000638848 BARGINQ6ZT62 677 aa12.29□□□□□ -0.44
KCNMA1-246ENST00000638848 PPM1KQ8N3J5 372 aa12.29□□□□□ -0.44
KCNMA1-246ENST00000638848 TATDN2Q93075 761 aa12.29□□□□□ -0.44
KCNMA1-246ENST00000638848 LGR5O75473 907 aa12.29□□□□□ -0.44
KCNMA1-246ENST00000638848 ELF3P78545 371 aaPredicted RBP12.29□□□□□ -0.44
KCNMA1-246ENST00000638848 CCDC50Q8IVM0 306 aa12.29□□□□□ -0.44
KCNMA1-246ENST00000638848 SLC35C1Q96A29 364 aa12.29□□□□□ -0.44
KCNMA1-246ENST00000638848 AIPL1Q9NZN9 384 aa12.29□□□□□ -0.44
KCNMA1-246ENST00000638848 CCNL1Q9UK58 526 aaPredicted RBP12.29□□□□□ -0.44
KCNMA1-246ENST00000638848 USTQ9Y2C2 406 aa12.29□□□□□ -0.44
KCNMA1-246ENST00000638848 ALG6Q9Y672 507 aa12.29□□□□□ -0.44
KCNMA1-246ENST00000638848 WDR91A4D1P6 747 aa12.29□□□□□ -0.44
KCNMA1-246ENST00000638848 IGF2BP3O00425 579 aaKnown RBP eCLIP12.29□□□□□ -0.44
KCNMA1-246ENST00000638848 CCDC137Q6PK04 289 aaKnown RBP12.29□□□□□ -0.44
KCNMA1-246ENST00000638848 PROM2Q8N271 834 aa12.29□□□□□ -0.44
KCNMA1-246ENST00000638848 NUCKS1Q9H1E3 243 aaKnown RBP12.29□□□□□ -0.44
KCNMA1-246ENST00000638848 CCT8L1PA6NM43 557 aa12.29□□□□□ -0.44
KCNMA1-246ENST00000638848 CLDN3O15551 220 aa12.29□□□□□ -0.44
KCNMA1-246ENST00000638848 ATP6V1G2O95670 118 aa12.29□□□□□ -0.44
KCNMA1-246ENST00000638848 ARHGAP4P98171 946 aa12.29□□□□□ -0.44
KCNMA1-246ENST00000638848 ODR4Q5SWX8 454 aa12.29□□□□□ -0.44
KCNMA1-246ENST00000638848 SYCP2LQ5T4T6 812 aa12.29□□□□□ -0.44
KCNMA1-246ENST00000638848 RFX8Q6ZV50 586 aa12.29□□□□□ -0.44
KCNMA1-246ENST00000638848 ZNF572Q7Z3I7 529 aaPredicted RBP12.29□□□□□ -0.44
KCNMA1-246ENST00000638848 SRRM1Q8IYB3 904 aaKnown RBP12.29□□□□□ -0.44
KCNMA1-246ENST00000638848 LMBR1Q8WVP7 490 aa12.29□□□□□ -0.44
KCNMA1-246ENST00000638848 NT5C3AQ9H0P0 336 aa12.29□□□□□ -0.44
KCNMA1-246ENST00000638848 ECT2Q9H8V3 914 aa12.29□□□□□ -0.44
KCNMA1-246ENST00000638848 RABGAP1Q9Y3P9 1069 aa12.29□□□□□ -0.44
KCNMA1-246ENST00000638848 DAGLAQ9Y4D2 1042 aa12.29□□□□□ -0.44
KCNMA1-246ENST00000638848 NUP98P52948 1817 aa12.29□□□□□ -0.44
KCNMA1-246ENST00000638848 RASGRF2O14827 1237 aa12.28□□□□□ -0.44
KCNMA1-246ENST00000638848 CALUO43852 315 aaPredicted RBP12.28□□□□□ -0.44
KCNMA1-246ENST00000638848 ZNF543Q08ER8 600 aa12.28□□□□□ -0.44
KCNMA1-246ENST00000638848 KYNUQ16719 465 aa12.28□□□□□ -0.44
KCNMA1-246ENST00000638848 LRRC27Q9C0I9 530 aa12.28□□□□□ -0.44
KCNMA1-246ENST00000638848 TTLL1O95922 423 aa12.28□□□□□ -0.44
KCNMA1-246ENST00000638848 PSMD2Q13200 908 aa12.28□□□□□ -0.44
KCNMA1-246ENST00000638848 MTMR3Q13615 1198 aa12.28□□□□□ -0.44
KCNMA1-246ENST00000638848 KIAA1755Q5JYT7 1200 aa12.28□□□□□ -0.44
KCNMA1-246ENST00000638848 TTC27Q6P3X3 843 aa12.28□□□□□ -0.44
KCNMA1-246ENST00000638848 C6orf89Q6UWU4 347 aa12.28□□□□□ -0.44
KCNMA1-246ENST00000638848 ATP8B4Q8TF62 1192 aa12.28□□□□□ -0.44
KCNMA1-246ENST00000638848 KLHL29Q96CT2 875 aa12.28□□□□□ -0.44
KCNMA1-246ENST00000638848 DYDC2Q96IM9 177 aa12.28□□□□□ -0.44
KCNMA1-246ENST00000638848 C9orf72Q96LT7 481 aa12.28□□□□□ -0.44
KCNMA1-246ENST00000638848 C8orf37Q96NL8 207 aa12.28□□□□□ -0.44
KCNMA1-246ENST00000638848 TMEM237Q96Q45 408 aa12.28□□□□□ -0.44
KCNMA1-246ENST00000638848 ERP44Q9BS26 406 aa12.28□□□□□ -0.44
KCNMA1-246ENST00000638848 ALG13Q9NP73 1137 aaKnown RBP12.28□□□□□ -0.44
KCNMA1-246ENST00000638848 ALS2Q96Q42 1657 aa12.28□□□□□ -0.44
KCNMA1-246ENST00000638848 ZBTB5O15062 677 aa12.28□□□□□ -0.44
KCNMA1-246ENST00000638848 SEPT2Q15019 361 aa12.28□□□□□ -0.44
KCNMA1-246ENST00000638848 EPHA7Q15375 998 aa12.28□□□□□ -0.44
KCNMA1-246ENST00000638848 RPUSD2Q8IZ73 545 aaKnown RBP12.28□□□□□ -0.44
KCNMA1-246ENST00000638848 AGAP11Q8TF27 550 aa12.28□□□□□ -0.44
KCNMA1-246ENST00000638848 TRIM7Q9C029 511 aa12.28□□□□□ -0.44
KCNMA1-246ENST00000638848 SERPINB13Q9UIV8 391 aa12.28□□□□□ -0.44
KCNMA1-246ENST00000638848 GGA1Q9UJY5 639 aa12.28□□□□□ -0.44
KCNMA1-246ENST00000638848 ANP32DO95626 131 aa12.27□□□□□ -0.44
KCNMA1-246ENST00000638848 GNA14O95837 355 aa12.27□□□□□ -0.44
KCNMA1-246ENST00000638848 PDHA1P08559 390 aa12.27□□□□□ -0.44
KCNMA1-246ENST00000638848 EEF2P13639 858 aaKnown RBP12.27□□□□□ -0.44
KCNMA1-246ENST00000638848 COMTP21964 271 aa12.27□□□□□ -0.44
KCNMA1-246ENST00000638848 PDIA5Q14554 519 aa12.27□□□□□ -0.44
KCNMA1-246ENST00000638848 LMBRD2Q68DH5 695 aaPredicted RBP12.27□□□□□ -0.44
KCNMA1-246ENST00000638848 ACTRT1Q8TDG2 376 aa12.27□□□□□ -0.44
KCNMA1-246ENST00000638848 SPOCK2Q92563 424 aa12.27□□□□□ -0.44
KCNMA1-246ENST00000638848 HAUS1Q96CS2 278 aa12.27□□□□□ -0.44
KCNMA1-246ENST00000638848 CEP63Q96MT8 703 aa12.27□□□□□ -0.44
KCNMA1-246ENST00000638848 DBNDD1Q9H9R9 158 aa12.27□□□□□ -0.44
KCNMA1-246ENST00000638848 GCKP35557 465 aa12.27□□□□□ -0.44
KCNMA1-246ENST00000638848 BIRC3Q13489 604 aa12.27□□□□□ -0.44
KCNMA1-246ENST00000638848 GRIPAP1Q4V328 841 aa12.27□□□□□ -0.44
KCNMA1-246ENST00000638848 HOOK3Q86VS8 718 aa12.27□□□□□ -0.44
KCNMA1-246ENST00000638848 RIOX1Q9H6W3 641 aa12.27□□□□□ -0.44
KCNMA1-246ENST00000638848 MCM8Q9UJA3 840 aa12.27□□□□□ -0.44
KCNMA1-246ENST00000638848 TTC7AQ9ULT0 858 aaPredicted RBP12.27□□□□□ -0.44
KCNMA1-246ENST00000638848 PCDHA2Q9Y5H9 948 aa12.27□□□□□ -0.44
KCNMA1-246ENST00000638848 DDX60Q8IY21 1712 aaKnown RBP12.27□□□□□ -0.45
KCNMA1-246ENST00000638848 ASTN1O14525 1302 aa12.27□□□□□ -0.45
KCNMA1-246ENST00000638848 PYGMP11217 842 aa12.27□□□□□ -0.45
KCNMA1-246ENST00000638848 TNFRSF8P28908 595 aa12.27□□□□□ -0.45
KCNMA1-246ENST00000638848 SLC12A3P55017 1021 aa12.27□□□□□ -0.45
KCNMA1-246ENST00000638848 KAZNQ674X7 775 aa12.27□□□□□ -0.45
KCNMA1-246ENST00000638848 FAM178BQ8IXR5 827 aa12.27□□□□□ -0.45
KCNMA1-246ENST00000638848 YIPF3Q9GZM5 350 aa12.27□□□□□ -0.45
KCNMA1-246ENST00000638848 RAB17Q9H0T7 212 aa12.27□□□□□ -0.45
KCNMA1-246ENST00000638848 HOMER2Q9NSB8 354 aa12.27□□□□□ -0.45
KCNMA1-246ENST00000638848 POLLQ9UGP5 575 aa12.27□□□□□ -0.45
KCNMA1-246ENST00000638848 CACNA1SQ13698 1873 aa12.27□□□□□ -0.45
KCNMA1-246ENST00000638848 CASZ1Q86V15 1759 aa12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms