RNA–Protein interactions for RNA: ENST00000638680.1

SCARB2-213, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 5,817 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-213ENST00000638680 EPN3Q9H201 632 aa19.72■□□□□ 0.75
SCARB2-213ENST00000638680 BCS1LQ9Y276 419 aa19.72■□□□□ 0.75
SCARB2-213ENST00000638680 PRELPP51888 382 aa19.72■□□□□ 0.75
SCARB2-213ENST00000638680 NCAPHQ15003 741 aa19.72■□□□□ 0.75
SCARB2-213ENST00000638680 NDE1Q9NXR1 346 aa19.72■□□□□ 0.75
SCARB2-213ENST00000638680 GGT7Q9UJ14 662 aa19.72■□□□□ 0.75
SCARB2-213ENST00000638680 CFAP69A5D8W1 941 aa19.72■□□□□ 0.75
SCARB2-213ENST00000638680 KRT14P02533 472 aa19.72■□□□□ 0.75
SCARB2-213ENST00000638680 MDH1P40925 334 aaKnown RBP19.72■□□□□ 0.75
SCARB2-213ENST00000638680 COPS2P61201 443 aa19.72■□□□□ 0.75
SCARB2-213ENST00000638680 FOXD4Q12950 439 aaPredicted RBP19.72■□□□□ 0.75
SCARB2-213ENST00000638680 Q3C1V9 767 aa19.72■□□□□ 0.75
SCARB2-213ENST00000638680 CAPRIN2Q6IMN6 1127 aaKnown RBP19.72■□□□□ 0.75
SCARB2-213ENST00000638680 FAM96AQ9H5X1 160 aa19.72■□□□□ 0.75
SCARB2-213ENST00000638680 RFX7Q2KHR2 1363 aa19.72■□□□□ 0.75
SCARB2-213ENST00000638680 KPNA7A9QM74 516 aa19.71■□□□□ 0.75
SCARB2-213ENST00000638680 SERPINB2P05120 415 aa19.71■□□□□ 0.75
SCARB2-213ENST00000638680 ZNF473Q8WTR7 871 aaKnown RBP19.71■□□□□ 0.75
SCARB2-213ENST00000638680 C1orf54Q8WWF1 131 aa19.71■□□□□ 0.75
SCARB2-213ENST00000638680 SCHIP1Q9P0W5 487 aaPredicted RBP19.71■□□□□ 0.75
SCARB2-213ENST00000638680 DYNC1LI1Q9Y6G9 523 aaKnown RBP19.71■□□□□ 0.75
SCARB2-213ENST00000638680 USP17L15C9J2P7 530 aa19.71■□□□□ 0.75
SCARB2-213ENST00000638680 USP17L13C9JLJ4 530 aa19.71■□□□□ 0.75
SCARB2-213ENST00000638680 USP17L11C9JVI0 530 aa19.71■□□□□ 0.75
SCARB2-213ENST00000638680 USP17L18D6R9N7 530 aa19.71■□□□□ 0.75
SCARB2-213ENST00000638680 USP17L22D6RA61 530 aa19.71■□□□□ 0.75
SCARB2-213ENST00000638680 USP17L17D6RBQ6 530 aa19.71■□□□□ 0.75
SCARB2-213ENST00000638680 USP17L19D6RCP7 530 aa19.71■□□□□ 0.75
SCARB2-213ENST00000638680 USP17L20D6RJB6 530 aa19.71■□□□□ 0.75
SCARB2-213ENST00000638680 MEFVO15553 781 aaPredicted RBP19.71■□□□□ 0.75
SCARB2-213ENST00000638680 USP17L24Q0WX57 530 aa19.71■□□□□ 0.75
SCARB2-213ENST00000638680 USP17L6PQ6QN14 398 aa19.71■□□□□ 0.75
SCARB2-213ENST00000638680 SULF1Q8IWU6 871 aa19.71■□□□□ 0.75
SCARB2-213ENST00000638680 ANKRD7Q92527 254 aa19.71■□□□□ 0.75
SCARB2-213ENST00000638680 MS4A14Q96JA4 679 aa19.71■□□□□ 0.75
SCARB2-213ENST00000638680 GTSE1Q9NYZ3 720 aa19.71■□□□□ 0.75
SCARB2-213ENST00000638680 LDHAP00338 332 aaKnown RBP19.71■□□□□ 0.75
SCARB2-213ENST00000638680 DYNC1I2Q13409 638 aaKnown RBP19.71■□□□□ 0.75
SCARB2-213ENST00000638680 FBXW10Q5XX13 1052 aa19.71■□□□□ 0.75
SCARB2-213ENST00000638680 SH2D3CQ8N5H7 860 aa19.71■□□□□ 0.75
SCARB2-213ENST00000638680 TMEM35BQ8NCS4 154 aa19.71■□□□□ 0.75
SCARB2-213ENST00000638680 TBRG4Q969Z0 631 aaKnown RBP eCLIP19.71■□□□□ 0.752e-7■■■■■ 62.8
SCARB2-213ENST00000638680 SNX12Q9UMY4 172 aa19.71■□□□□ 0.75
SCARB2-213ENST00000638680 BBOX1O75936 387 aa19.71■□□□□ 0.75
SCARB2-213ENST00000638680 STAG2Q8N3U4 1231 aa19.71■□□□□ 0.75
SCARB2-213ENST00000638680 WNT8AQ9H1J5 351 aa19.71■□□□□ 0.75
SCARB2-213ENST00000638680 LIMA1Q9UHB6 759 aaKnown RBP19.71■□□□□ 0.75
SCARB2-213ENST00000638680 PPP1R37O75864 691 aa19.71■□□□□ 0.75
SCARB2-213ENST00000638680 ARL13BQ3SXY8 428 aa19.71■□□□□ 0.75
SCARB2-213ENST00000638680 PADI6Q6TGC4 694 aa19.71■□□□□ 0.75
SCARB2-213ENST00000638680 FAM160B2Q86V87 743 aa19.71■□□□□ 0.75
SCARB2-213ENST00000638680 WARS2Q9UGM6 360 aaKnown RBP19.71■□□□□ 0.75
SCARB2-213ENST00000638680 HSPA9P38646 679 aaKnown RBP19.7■□□□□ 0.74
SCARB2-213ENST00000638680 RCAN1P53805 252 aa19.7■□□□□ 0.74
SCARB2-213ENST00000638680 ZNF667Q5HYK9 610 aa19.7■□□□□ 0.74
SCARB2-213ENST00000638680 MIGA2Q7L4E1 593 aa19.7■□□□□ 0.74
SCARB2-213ENST00000638680 GLYCTKQ8IVS8 523 aa19.7■□□□□ 0.74
SCARB2-213ENST00000638680 ABCF3Q9NUQ8 709 aa19.7■□□□□ 0.74
SCARB2-213ENST00000638680 PRR36Q9H6K5 1346 aa19.7■□□□□ 0.74
SCARB2-213ENST00000638680 DIAPH2O60879 1101 aa19.7■□□□□ 0.74
SCARB2-213ENST00000638680 CALB1P05937 261 aa19.7■□□□□ 0.74
SCARB2-213ENST00000638680 MARK3P27448 753 aa19.7■□□□□ 0.74
SCARB2-213ENST00000638680 DCAF4Q8WV16 495 aa19.7■□□□□ 0.74
SCARB2-213ENST00000638680 RUBCNQ92622 972 aa19.7■□□□□ 0.74
SCARB2-213ENST00000638680 NLRP4Q96MN2 994 aa19.7■□□□□ 0.74
SCARB2-213ENST00000638680 ASNSD1Q9NWL6 643 aa19.7■□□□□ 0.74
SCARB2-213ENST00000638680 VAMP7P51809 220 aa19.7■□□□□ 0.74
SCARB2-213ENST00000638680 ANKRD40Q6AI12 368 aa19.7■□□□□ 0.74
SCARB2-213ENST00000638680 DPP9Q86TI2 863 aa19.7■□□□□ 0.74
SCARB2-213ENST00000638680 VPS39Q96JC1 886 aa19.7■□□□□ 0.74
SCARB2-213ENST00000638680 L3MBTL1Q9Y468 752 aa19.7■□□□□ 0.74
SCARB2-213ENST00000638680 MBD5Q9P267 1494 aa19.7■□□□□ 0.74
SCARB2-213ENST00000638680 TYW5A2RUC4 315 aaKnown RBP19.7■□□□□ 0.74
SCARB2-213ENST00000638680 SLC16A4O15374 487 aa19.7■□□□□ 0.74
SCARB2-213ENST00000638680 TFDP2Q14188 446 aa19.7■□□□□ 0.74
SCARB2-213ENST00000638680 RWDD4Q6NW29 188 aaKnown RBP19.7■□□□□ 0.74
SCARB2-213ENST00000638680 THNSL1Q8IYQ7 743 aa19.7■□□□□ 0.74
SCARB2-213ENST00000638680 NCLNQ969V3 563 aa19.7■□□□□ 0.74
SCARB2-213ENST00000638680 BTBD6Q96KE9 485 aa19.7■□□□□ 0.74
SCARB2-213ENST00000638680 CYP4F11Q9HBI6 524 aa19.7■□□□□ 0.74
SCARB2-213ENST00000638680 KLHL8Q9P2G9 620 aaPredicted RBP19.7■□□□□ 0.74
SCARB2-213ENST00000638680 SUCLA2Q9P2R7 463 aaPredicted RBP19.7■□□□□ 0.74
SCARB2-213ENST00000638680 SUN2Q9UH99 717 aa19.7■□□□□ 0.74
SCARB2-213ENST00000638680 TRIM33Q9UPN9 1127 aa19.7■□□□□ 0.74
SCARB2-213ENST00000638680 ROBO2Q9HCK4 1378 aa19.7■□□□□ 0.74
SCARB2-213ENST00000638680 ERBB3P21860 1342 aa19.7■□□□□ 0.74
SCARB2-213ENST00000638680 POTEFA5A3E0 1075 aa19.7■□□□□ 0.74
SCARB2-213ENST00000638680 TRIM66O15016 1216 aa19.7■□□□□ 0.74
SCARB2-213ENST00000638680 POTEIP0CG38 1075 aa19.7■□□□□ 0.74
SCARB2-213ENST00000638680 KCNQ4P56696 695 aa19.7■□□□□ 0.74
SCARB2-213ENST00000638680 OCA2Q04671 838 aa19.7■□□□□ 0.74
SCARB2-213ENST00000638680 DHX34Q14147 1143 aaKnown RBP19.7■□□□□ 0.74
SCARB2-213ENST00000638680 POTEGQ6S5H5 508 aa19.7■□□□□ 0.74
SCARB2-213ENST00000638680 POTEEQ6S8J3 1075 aa19.7■□□□□ 0.74
SCARB2-213ENST00000638680 OR6B3Q8NGW1 331 aa19.7■□□□□ 0.74
SCARB2-213ENST00000638680 CHP1Q99653 195 aa19.7■□□□□ 0.74
SCARB2-213ENST00000638680 FAM213AQ9BRX8 229 aa19.7■□□□□ 0.74
SCARB2-213ENST00000638680 FBXO2Q9UK22 296 aaPredicted RBP19.7■□□□□ 0.74
SCARB2-213ENST00000638680 FMR1Q06787 632 aaKnown RBP eCLIP19.69■□□□□ 0.74
SCARB2-213ENST00000638680 ARMCX2Q7L311 632 aa19.69■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms