RNA–Protein interactions for RNA: ENST00000638163.1

LINC00598-216, long intergenic non-protein coding RNA 598, humanhuman

TSL 4 BASIC

Gene LINC00598, Length 528 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00598-216ENST00000638163 ARHGAP28Q9P2N2 729 aa11.35□□□□□ -0.59
LINC00598-216ENST00000638163 DAAM1Q9Y4D1 1078 aa11.35□□□□□ -0.59
LINC00598-216ENST00000638163 A0A1B0GTH6 734 aa11.34□□□□□ -0.59
LINC00598-216ENST00000638163 C11orf97A0A1B0GVM6 126 aaPredicted RBP11.34□□□□□ -0.59
LINC00598-216ENST00000638163 CCDC169A6NNP5 214 aa11.34□□□□□ -0.59
LINC00598-216ENST00000638163 RSPH10B2B2RC85 870 aa11.34□□□□□ -0.59
LINC00598-216ENST00000638163 ZBTB39O15060 712 aa11.34□□□□□ -0.59
LINC00598-216ENST00000638163 TPM1P09493 284 aa11.34□□□□□ -0.59
LINC00598-216ENST00000638163 RSPH10BP0C881 870 aa11.34□□□□□ -0.59
LINC00598-216ENST00000638163 EPB41P11171 864 aaKnown RBP11.34□□□□□ -0.59
LINC00598-216ENST00000638163 PEX3P56589 373 aa11.34□□□□□ -0.59
LINC00598-216ENST00000638163 PPFIA1Q13136 1202 aa11.34□□□□□ -0.59
LINC00598-216ENST00000638163 CCL14Q16627 93 aa11.34□□□□□ -0.59
LINC00598-216ENST00000638163 FKBP15Q5T1M5 1219 aa11.34□□□□□ -0.59
LINC00598-216ENST00000638163 ANKRD40Q6AI12 368 aa11.34□□□□□ -0.59
LINC00598-216ENST00000638163 APBB1IPQ7Z5R6 666 aaPredicted RBP11.34□□□□□ -0.59
LINC00598-216ENST00000638163 ZNF410Q86VK4 478 aa11.34□□□□□ -0.59
LINC00598-216ENST00000638163 TMEM161BQ8NDZ6 487 aa11.34□□□□□ -0.59
LINC00598-216ENST00000638163 DEPTORQ8TB45 409 aa11.34□□□□□ -0.59
LINC00598-216ENST00000638163 COPS5Q92905 334 aa11.34□□□□□ -0.59
LINC00598-216ENST00000638163 SRRTQ9BXP5 876 aaKnown RBP11.34□□□□□ -0.59
LINC00598-216ENST00000638163 SEMA6BQ9H3T3 888 aa11.34□□□□□ -0.59
LINC00598-216ENST00000638163 BCAS3Q9H6U6 928 aa11.34□□□□□ -0.59
LINC00598-216ENST00000638163 XPNPEP1Q9NQW7 623 aa11.34□□□□□ -0.59
LINC00598-216ENST00000638163 MAPK8IP1Q9UQF2 711 aa11.34□□□□□ -0.59
LINC00598-216ENST00000638163 FRMD4BQ9Y2L6 1034 aa11.34□□□□□ -0.59
LINC00598-216ENST00000638163 MYH9P35579 1960 aaKnown RBP11.34□□□□□ -0.59
LINC00598-216ENST00000638163 ITIH6Q6UXX5 1313 aa11.34□□□□□ -0.59
LINC00598-216ENST00000638163 ARID2Q68CP9 1835 aa11.33□□□□□ -0.6
LINC00598-216ENST00000638163 A0A087WWV3 80 aa11.33□□□□□ -0.6
LINC00598-216ENST00000638163 A0A1W2PQC6 194 aa11.33□□□□□ -0.6
LINC00598-216ENST00000638163 STX10O60499 249 aa11.33□□□□□ -0.6
LINC00598-216ENST00000638163 PIGRP01833 764 aa11.33□□□□□ -0.6
LINC00598-216ENST00000638163 MYBP10242 640 aa11.33□□□□□ -0.6
LINC00598-216ENST00000638163 PRKAR2AP13861 404 aaKnown RBP11.33□□□□□ -0.6
LINC00598-216ENST00000638163 GARTP22102 1010 aa11.33□□□□□ -0.6
LINC00598-216ENST00000638163 NR2F2P24468 414 aa11.33□□□□□ -0.6
LINC00598-216ENST00000638163 CTGFP29279 349 aa11.33□□□□□ -0.6
LINC00598-216ENST00000638163 PSMC2P35998 433 aaKnown RBP11.33□□□□□ -0.6
LINC00598-216ENST00000638163 PHKA2P46019 1235 aa11.33□□□□□ -0.6
LINC00598-216ENST00000638163 STX17P56962 302 aa11.33□□□□□ -0.6
LINC00598-216ENST00000638163 POU5F1Q01860 360 aaKnown RBP11.33□□□□□ -0.6
LINC00598-216ENST00000638163 CACNB1Q02641 598 aaPredicted RBP11.33□□□□□ -0.6
LINC00598-216ENST00000638163 PTPN11Q06124 597 aaPredicted RBP11.33□□□□□ -0.6
LINC00598-216ENST00000638163 ADAM9Q13443 819 aa11.33□□□□□ -0.6
LINC00598-216ENST00000638163 MAN2A1Q16706 1144 aa11.33□□□□□ -0.6
LINC00598-216ENST00000638163 CDCA2Q69YH5 1023 aaPredicted RBP11.33□□□□□ -0.6
LINC00598-216ENST00000638163 SMYD5Q6GMV2 418 aa11.33□□□□□ -0.6
LINC00598-216ENST00000638163 TAF2Q6P1X5 1199 aa11.33□□□□□ -0.6
LINC00598-216ENST00000638163 ZPBP2Q6X784 338 aa11.33□□□□□ -0.6
LINC00598-216ENST00000638163 LRRC55Q6ZSA7 311 aa11.33□□□□□ -0.6
LINC00598-216ENST00000638163 RNF180Q86T96 592 aa11.33□□□□□ -0.6
LINC00598-216ENST00000638163 IFNLR1Q8IU57 520 aaPredicted RBP11.33□□□□□ -0.6
LINC00598-216ENST00000638163 DRC7Q8IY82 874 aa11.33□□□□□ -0.6
LINC00598-216ENST00000638163 NME8Q8N427 588 aa11.33□□□□□ -0.6
LINC00598-216ENST00000638163 CD99L2Q8TCZ2 262 aa11.33□□□□□ -0.6
LINC00598-216ENST00000638163 CNOT6LQ96LI5 555 aaKnown RBP11.33□□□□□ -0.6
LINC00598-216ENST00000638163 PRIMPOLQ96LW4 560 aa11.33□□□□□ -0.6
LINC00598-216ENST00000638163 DUSP9Q99956 384 aaKnown RBP11.33□□□□□ -0.6
LINC00598-216ENST00000638163 TSEN34Q9BSV6 310 aaKnown RBP11.33□□□□□ -0.6
LINC00598-216ENST00000638163 MTG1Q9BT17 334 aaPredicted RBP11.33□□□□□ -0.6
LINC00598-216ENST00000638163 INO80BQ9C086 356 aaPredicted RBP11.33□□□□□ -0.6
LINC00598-216ENST00000638163 ARHGAP39Q9C0H5 1083 aa11.33□□□□□ -0.6
LINC00598-216ENST00000638163 HSD3B7Q9H2F3 369 aa11.33□□□□□ -0.6
LINC00598-216ENST00000638163 TBX20Q9UMR3 447 aa11.33□□□□□ -0.6
LINC00598-216ENST00000638163 GABRQQ9UN88 632 aa11.33□□□□□ -0.6
LINC00598-216ENST00000638163 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP11.33□□□□□ -0.6
LINC00598-216ENST00000638163 MCM3APO60318 1980 aa11.32□□□□□ -0.6
LINC00598-216ENST00000638163 SMIM35A0A1B0GVV1 85 aa11.32□□□□□ -0.6
LINC00598-216ENST00000638163 DENND3A2RUS2 1198 aa11.32□□□□□ -0.6
LINC00598-216ENST00000638163 MBLAC1A4D2B0 266 aaPredicted RBP11.32□□□□□ -0.6
LINC00598-216ENST00000638163 MOXD2PA6NHM9 499 aa11.32□□□□□ -0.6
LINC00598-216ENST00000638163 LGALS16A8MUM7 142 aa11.32□□□□□ -0.6
LINC00598-216ENST00000638163 K7ERI5 159 aa11.32□□□□□ -0.6
LINC00598-216ENST00000638163 HAS3O00219 553 aa11.32□□□□□ -0.6
LINC00598-216ENST00000638163 N4BP3O15049 544 aa11.32□□□□□ -0.6
LINC00598-216ENST00000638163 N4BP1O75113 896 aaKnown RBP11.32□□□□□ -0.6
LINC00598-216ENST00000638163 C22orf31O95567 290 aa11.32□□□□□ -0.6
LINC00598-216ENST00000638163 LDHAP00338 332 aaKnown RBP11.32□□□□□ -0.6
LINC00598-216ENST00000638163 NR3C1P04150 777 aa11.32□□□□□ -0.6
LINC00598-216ENST00000638163 PTMAP06454 111 aaKnown RBP11.32□□□□□ -0.6
LINC00598-216ENST00000638163 INSRRP14616 1297 aa11.32□□□□□ -0.6
LINC00598-216ENST00000638163 MARK3P27448 753 aa11.32□□□□□ -0.6
LINC00598-216ENST00000638163 NMT1P30419 496 aaKnown RBP11.32□□□□□ -0.6
LINC00598-216ENST00000638163 MTIF2P46199 727 aaKnown RBP11.32□□□□□ -0.6
LINC00598-216ENST00000638163 CACNB2Q08289 660 aaPredicted RBP11.32□□□□□ -0.6
LINC00598-216ENST00000638163 MFSD10Q14728 455 aa11.32□□□□□ -0.6
LINC00598-216ENST00000638163 GRIK4Q16099 956 aa11.32□□□□□ -0.6
LINC00598-216ENST00000638163 MAPK6Q16659 721 aa11.32□□□□□ -0.6
LINC00598-216ENST00000638163 KYAT1Q16773 422 aa11.32□□□□□ -0.6
LINC00598-216ENST00000638163 CCDC40Q4G0X9 1142 aa11.32□□□□□ -0.6
LINC00598-216ENST00000638163 INTS8Q75QN2 995 aaKnown RBP11.32□□□□□ -0.6
LINC00598-216ENST00000638163 SESTD1Q86VW0 696 aa11.32□□□□□ -0.6
LINC00598-216ENST00000638163 FMNL3Q8IVF7 1028 aa11.32□□□□□ -0.6
LINC00598-216ENST00000638163 CCDC150Q8NCX0 1101 aa11.32□□□□□ -0.6
LINC00598-216ENST00000638163 ZNF296Q8WUU4 475 aaPredicted RBP11.32□□□□□ -0.6
LINC00598-216ENST00000638163 MED15Q96RN5 788 aa11.32□□□□□ -0.6
LINC00598-216ENST00000638163 TUBGCP2Q9BSJ2 902 aa11.32□□□□□ -0.6
LINC00598-216ENST00000638163 NUP58Q9BVL2 599 aa11.32□□□□□ -0.6
LINC00598-216ENST00000638163 HMX1Q9NP08 348 aaPredicted RBP11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms