RNA–Protein interactions for RNA: ENST00000638159.1

GABRA1-220, Transcript of gamma-aminobutyric acid type A receptor alpha1 subunit, humanhuman

TSL 5 BASIC

Gene GABRA1, Length 4,088 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRA1-220ENST00000638159 ZNF532Q9HCE3 1301 aa4.9□□□□□ -1.62
GABRA1-220ENST00000638159 CCDC69A6NI79 296 aa4.9□□□□□ -1.62
GABRA1-220ENST00000638159 C19orf67A6NJJ6 358 aa4.9□□□□□ -1.62
GABRA1-220ENST00000638159 ZW10O43264 779 aa4.9□□□□□ -1.62
GABRA1-220ENST00000638159 HYAL3O43820 417 aaPredicted RBP4.9□□□□□ -1.62
GABRA1-220ENST00000638159 HBP1O60381 514 aa4.9□□□□□ -1.62
GABRA1-220ENST00000638159 SYNCRIPO60506 623 aaKnown RBP4.9□□□□□ -1.62
GABRA1-220ENST00000638159 CD4P01730 458 aa4.9□□□□□ -1.62
GABRA1-220ENST00000638159 ICAM1P05362 532 aa4.9□□□□□ -1.62
GABRA1-220ENST00000638159 TRAPPC10P48553 1259 aa4.9□□□□□ -1.62
GABRA1-220ENST00000638159 RPS6P62753 249 aaKnown RBP4.9□□□□□ -1.62
GABRA1-220ENST00000638159 GRIK4Q16099 956 aa4.9□□□□□ -1.62
GABRA1-220ENST00000638159 SPEM1Q8N4L4 309 aa4.9□□□□□ -1.62
GABRA1-220ENST00000638159 COLGALT1Q8NBJ5 622 aa4.9□□□□□ -1.62
GABRA1-220ENST00000638159 ADAMTS5Q9UNA0 930 aa4.9□□□□□ -1.62
GABRA1-220ENST00000638159 SBF1O95248 1867 aa4.9□□□□□ -1.62
GABRA1-220ENST00000638159 GOLGA4Q13439 2230 aaKnown RBP4.9□□□□□ -1.62
GABRA1-220ENST00000638159 FOCADQ5VW36 1801 aa4.9□□□□□ -1.62
GABRA1-220ENST00000638159 LOC730098B7Z3J9 87 aa4.9□□□□□ -1.63
GABRA1-220ENST00000638159 DDX39AO00148 427 aaKnown RBP4.9□□□□□ -1.63
GABRA1-220ENST00000638159 AP5Z1O43299 807 aa4.9□□□□□ -1.63
GABRA1-220ENST00000638159 STAM2O75886 525 aa4.9□□□□□ -1.63
GABRA1-220ENST00000638159 XBP1P17861 261 aa4.9□□□□□ -1.63
GABRA1-220ENST00000638159 CSRP1P21291 193 aaKnown RBP4.9□□□□□ -1.63
GABRA1-220ENST00000638159 IL12RB1P42701 662 aa4.9□□□□□ -1.63
GABRA1-220ENST00000638159 PER3P56645 1201 aa4.9□□□□□ -1.63
GABRA1-220ENST00000638159 RIPPLY3P57055 190 aa4.9□□□□□ -1.63
GABRA1-220ENST00000638159 ZNF528Q3MIS6 628 aa4.9□□□□□ -1.63
GABRA1-220ENST00000638159 ARHGAP29Q52LW3 1261 aa4.9□□□□□ -1.63
GABRA1-220ENST00000638159 NOMO2Q5JPE7 1267 aa4.9□□□□□ -1.63
GABRA1-220ENST00000638159 TMEM164Q5U3C3 297 aa4.9□□□□□ -1.63
GABRA1-220ENST00000638159 RASIP1Q5U651 963 aa4.9□□□□□ -1.63
GABRA1-220ENST00000638159 KIAA1324Q6UXG2 1013 aaKnown RBP4.9□□□□□ -1.63
GABRA1-220ENST00000638159 CELF4Q9BZC1 486 aaKnown RBP4.9□□□□□ -1.63
GABRA1-220ENST00000638159 DACH1Q9UI36 760 aa4.9□□□□□ -1.63
GABRA1-220ENST00000638159 RALYQ9UKM9 306 aaKnown RBP4.9□□□□□ -1.63
GABRA1-220ENST00000638159 CEP83Q9Y592 693 aa4.9□□□□□ -1.63
GABRA1-220ENST00000638159 MRPL42Q9Y6G3 142 aaKnown RBP4.9□□□□□ -1.63
GABRA1-220ENST00000638159 TBX10O75333 385 aa4.9□□□□□ -1.63
GABRA1-220ENST00000638159 GJB6O95452 261 aa4.9□□□□□ -1.63
GABRA1-220ENST00000638159 FGF19O95750 216 aa4.9□□□□□ -1.63
GABRA1-220ENST00000638159 CNPP09543 421 aaKnown RBP4.9□□□□□ -1.63
GABRA1-220ENST00000638159 PDE6AP16499 860 aa4.9□□□□□ -1.63
GABRA1-220ENST00000638159 STAT5BP51692 787 aa4.9□□□□□ -1.63
GABRA1-220ENST00000638159 GOLGA8FQ08AF8 430 aa4.9□□□□□ -1.63
GABRA1-220ENST00000638159 GOLGA8DPQ0D2H9 430 aa4.9□□□□□ -1.63
GABRA1-220ENST00000638159 SCAPQ12770 1279 aa4.9□□□□□ -1.63
GABRA1-220ENST00000638159 SF3A2Q15428 464 aaKnown RBP4.9□□□□□ -1.63
GABRA1-220ENST00000638159 PLEKHG6Q3KR16 790 aa4.9□□□□□ -1.63
GABRA1-220ENST00000638159 SLC36A4Q6YBV0 504 aa4.9□□□□□ -1.63
GABRA1-220ENST00000638159 LEMD2Q8NC56 503 aa4.9□□□□□ -1.63
GABRA1-220ENST00000638159 SNIP1Q8TAD8 396 aaKnown RBP4.9□□□□□ -1.63
GABRA1-220ENST00000638159 SCFD1Q8WVM8 642 aa4.9□□□□□ -1.63
GABRA1-220ENST00000638159 PIK3R5Q8WYR1 880 aa4.9□□□□□ -1.63
GABRA1-220ENST00000638159 CORO1BQ9BR76 489 aa4.9□□□□□ -1.63
GABRA1-220ENST00000638159 CYP4F11Q9HBI6 524 aa4.9□□□□□ -1.63
GABRA1-220ENST00000638159 SEPT10Q9P0V9 454 aa4.9□□□□□ -1.63
GABRA1-220ENST00000638159 IPO11Q9UI26 975 aaKnown RBP4.9□□□□□ -1.63
GABRA1-220ENST00000638159 SLC6A14Q9UN76 642 aa4.9□□□□□ -1.63
GABRA1-220ENST00000638159 ANKRD11Q6UB99 2663 aaPredicted RBP4.89□□□□□ -1.63
GABRA1-220ENST00000638159 VPS4BO75351 444 aa4.89□□□□□ -1.63
GABRA1-220ENST00000638159 BAG4O95429 457 aaKnown RBP4.89□□□□□ -1.63
GABRA1-220ENST00000638159 CER1O95813 267 aa4.89□□□□□ -1.63
GABRA1-220ENST00000638159 ALPPL2P10696 532 aa4.89□□□□□ -1.63
GABRA1-220ENST00000638159 PTPN2P17706 415 aa4.89□□□□□ -1.63
GABRA1-220ENST00000638159 PDCP20941 246 aa4.89□□□□□ -1.63
GABRA1-220ENST00000638159 SLC16A2P36021 539 aa4.89□□□□□ -1.63
GABRA1-220ENST00000638159 ZSCAN23Q3MJ62 389 aa4.89□□□□□ -1.63
GABRA1-220ENST00000638159 DCAF6Q58WW2 860 aa4.89□□□□□ -1.63
GABRA1-220ENST00000638159 CYFIP1Q7L576 1253 aa4.89□□□□□ -1.63
GABRA1-220ENST00000638159 C12orf40Q86WS4 652 aa4.89□□□□□ -1.63
GABRA1-220ENST00000638159 LSMEM2Q8N112 164 aa4.89□□□□□ -1.63
GABRA1-220ENST00000638159 CHCHD4Q8N4Q1 142 aa4.89□□□□□ -1.63
GABRA1-220ENST00000638159 COPS5Q92905 334 aa4.89□□□□□ -1.63
GABRA1-220ENST00000638159 SLC38A10Q9HBR0 1119 aa4.89□□□□□ -1.63
GABRA1-220ENST00000638159 C11orf16Q9NQ32 467 aa4.89□□□□□ -1.63
GABRA1-220ENST00000638159 FTSJ1Q9UET6 329 aa4.89□□□□□ -1.63
GABRA1-220ENST00000638159 ITGB1BP2Q9UKP3 347 aa4.89□□□□□ -1.63
GABRA1-220ENST00000638159 VPS4AQ9UN37 437 aa4.89□□□□□ -1.63
GABRA1-220ENST00000638159 FNDC3AQ9Y2H6 1198 aaKnown RBP4.89□□□□□ -1.63
GABRA1-220ENST00000638159 NOC2LQ9Y3T9 749 aaKnown RBP4.89□□□□□ -1.63
GABRA1-220ENST00000638159 NEUROG3Q9Y4Z2 214 aa4.89□□□□□ -1.63
GABRA1-220ENST00000638159 ZBED9Q6R2W3 1325 aa4.89□□□□□ -1.63
GABRA1-220ENST00000638159 INO80B-WBP1J3KQ70 363 aa4.89□□□□□ -1.63
GABRA1-220ENST00000638159 HNRNPA1P09651 372 aaKnown RBP eCLIP4.89□□□□□ -1.63
GABRA1-220ENST00000638159 CALM1P0DP23 149 aa4.89□□□□□ -1.63
GABRA1-220ENST00000638159 CALM2P0DP24 149 aa4.89□□□□□ -1.63
GABRA1-220ENST00000638159 CALM3P0DP25 149 aa4.89□□□□□ -1.63
GABRA1-220ENST00000638159 GRIK5Q16478 980 aa4.89□□□□□ -1.63
GABRA1-220ENST00000638159 IFIT1BQ5T764 474 aaKnown RBP4.89□□□□□ -1.63
GABRA1-220ENST00000638159 TSSK4Q6SA08 328 aa4.89□□□□□ -1.63
GABRA1-220ENST00000638159 IL27RAQ6UWB1 636 aa4.89□□□□□ -1.63
GABRA1-220ENST00000638159 WDR63Q8IWG1 891 aa4.89□□□□□ -1.63
GABRA1-220ENST00000638159 NEDD1Q8NHV4 660 aa4.89□□□□□ -1.63
GABRA1-220ENST00000638159 RUFY2Q8WXA3 655 aa4.89□□□□□ -1.63
GABRA1-220ENST00000638159 FOXJ1Q92949 421 aa4.89□□□□□ -1.63
GABRA1-220ENST00000638159 KXD1Q9BQD3 176 aa4.89□□□□□ -1.63
GABRA1-220ENST00000638159 DBNDD2Q9BQY9 259 aa4.89□□□□□ -1.63
GABRA1-220ENST00000638159 KRT23Q9C075 422 aa4.89□□□□□ -1.63
GABRA1-220ENST00000638159 BRMS1Q9HCU9 246 aa4.89□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms