RNA–Protein interactions for RNA: ENST00000637981.1

CACNA1A-256, Transcript of calcium voltage-gated channel subunit alpha1 A, human

TSL 5

Gene CACNA1A, Length 1,346 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CACNA1A-256	ENST00000637981	TSHZ2	Q9NRE2	1034 aa		10.64	□□□□□ -0.71
CACNA1A-256	ENST00000637981	GJB4	Q9NTQ9	266 aa		10.64	□□□□□ -0.71
CACNA1A-256	ENST00000637981	PUF60	Q9UHX1	559 aa	Known RBP	10.64	□□□□□ -0.71
CACNA1A-256	ENST00000637981	NOL7	Q9UMY1	257 aa	Known RBP	10.64	□□□□□ -0.71
CACNA1A-256	ENST00000637981	ST3GAL5	Q9UNP4	418 aa		10.64	□□□□□ -0.71
CACNA1A-256	ENST00000637981	LZTS1	Q9Y250	596 aa		10.64	□□□□□ -0.71
CACNA1A-256	ENST00000637981	NR2E1	Q9Y466	385 aa		10.64	□□□□□ -0.71
CACNA1A-256	ENST00000637981	VPS37C	A5D8V6	355 aa	Predicted RBP	10.63	□□□□□ -0.71
CACNA1A-256	ENST00000637981	STX6	O43752	255 aa		10.63	□□□□□ -0.71
CACNA1A-256	ENST00000637981	HBP1	O60381	514 aa		10.63	□□□□□ -0.71
CACNA1A-256	ENST00000637981	AR	P10275	920 aa		10.63	□□□□□ -0.71
CACNA1A-256	ENST00000637981	HOXB8	P17481	243 aa	Predicted RBP	10.63	□□□□□ -0.71
CACNA1A-256	ENST00000637981	TRAPPC10	P48553	1259 aa		10.63	□□□□□ -0.71
CACNA1A-256	ENST00000637981	SLC26A2	P50443	739 aa		10.63	□□□□□ -0.71
CACNA1A-256	ENST00000637981	NUBP1	P53384	320 aa		10.63	□□□□□ -0.71
CACNA1A-256	ENST00000637981	SET	Q01105	290 aa	Predicted RBP	10.63	□□□□□ -0.71
CACNA1A-256	ENST00000637981	PLCB3	Q01970	1234 aa		10.63	□□□□□ -0.71
CACNA1A-256	ENST00000637981	ORC2	Q13416	577 aa	Predicted RBP	10.63	□□□□□ -0.71
CACNA1A-256	ENST00000637981	CEP55	Q53EZ4	464 aa		10.63	□□□□□ -0.71
CACNA1A-256	ENST00000637981	PIK3AP1	Q6ZUJ8	805 aa		10.63	□□□□□ -0.71
CACNA1A-256	ENST00000637981	NIPA1	Q7RTP0	329 aa		10.63	□□□□□ -0.71
CACNA1A-256	ENST00000637981	BRAP	Q7Z569	592 aa		10.63	□□□□□ -0.71
CACNA1A-256	ENST00000637981	NEK8	Q86SG6	692 aa		10.63	□□□□□ -0.71
CACNA1A-256	ENST00000637981	KIAA0319L	Q8IZA0	1049 aa		10.63	□□□□□ -0.71
CACNA1A-256	ENST00000637981	KREMEN2	Q8NCW0	462 aa		10.63	□□□□□ -0.71
CACNA1A-256	ENST00000637981	TBCK	Q8TEA7	893 aa		10.63	□□□□□ -0.71
CACNA1A-256	ENST00000637981	MRPS27	Q92552	414 aa	Known RBP	10.63	□□□□□ -0.71
CACNA1A-256	ENST00000637981	PPP1R16B	Q96T49	567 aa		10.63	□□□□□ -0.71
CACNA1A-256	ENST00000637981	ZSCAN16	Q9H4T2	348 aa	Predicted RBP	10.63	□□□□□ -0.71
CACNA1A-256	ENST00000637981	TMEM161A	Q9NX61	479 aa		10.63	□□□□□ -0.71
CACNA1A-256	ENST00000637981	RBM19	Q9Y4C8	960 aa	Known RBP	10.63	□□□□□ -0.71
CACNA1A-256	ENST00000637981	IGKV6D-21	A0A0A0MT36	114 aa		10.62	□□□□□ -0.71
CACNA1A-256	ENST00000637981	HIDE1	A8MVS5	230 aa		10.62	□□□□□ -0.71
CACNA1A-256	ENST00000637981	PROB1	E7EW31	1015 aa		10.62	□□□□□ -0.71
CACNA1A-256	ENST00000637981	DDX39A	O00148	427 aa	Known RBP	10.62	□□□□□ -0.71
CACNA1A-256	ENST00000637981	BACH1	O14867	736 aa		10.62	□□□□□ -0.71
CACNA1A-256	ENST00000637981	GALR2	O43603	387 aa	Predicted RBP	10.62	□□□□□ -0.71
CACNA1A-256	ENST00000637981	ATG7	O95352	703 aa		10.62	□□□□□ -0.71
CACNA1A-256	ENST00000637981	CIITA	P33076	1130 aa		10.62	□□□□□ -0.71
CACNA1A-256	ENST00000637981	NR5A1	Q13285	461 aa		10.62	□□□□□ -0.71
CACNA1A-256	ENST00000637981	ITGB3BP	Q13352	177 aa	Predicted RBP	10.62	□□□□□ -0.71
CACNA1A-256	ENST00000637981	MTMR3	Q13615	1198 aa		10.62	□□□□□ -0.71
CACNA1A-256	ENST00000637981	INF2	Q27J81	1249 aa		10.62	□□□□□ -0.71
CACNA1A-256	ENST00000637981	KIZ	Q2M2Z5	673 aa		10.62	□□□□□ -0.71
CACNA1A-256	ENST00000637981	TPRN	Q4KMQ1	711 aa		10.62	□□□□□ -0.71
CACNA1A-256	ENST00000637981	RILPL1	Q5EBL4	403 aa		10.62	□□□□□ -0.71
CACNA1A-256	ENST00000637981	FAM160B1	Q5W0V3	765 aa		10.62	□□□□□ -0.71
CACNA1A-256	ENST00000637981	PPP4R3A	Q6IN85	833 aa		10.62	□□□□□ -0.71
CACNA1A-256	ENST00000637981	ASCL5	Q7RTU5	278 aa		10.62	□□□□□ -0.71
CACNA1A-256	ENST00000637981	FAM228A	Q86W67	206 aa		10.62	□□□□□ -0.71
CACNA1A-256	ENST00000637981	UBALD2	Q8IYN6	164 aa		10.62	□□□□□ -0.71
CACNA1A-256	ENST00000637981	SPRYD3	Q8NCJ5	442 aa		10.62	□□□□□ -0.71
CACNA1A-256	ENST00000637981	OXER1	Q8TDS5	423 aa		10.62	□□□□□ -0.71
CACNA1A-256	ENST00000637981	PGBD1	Q96JS3	809 aa		10.62	□□□□□ -0.71
CACNA1A-256	ENST00000637981	OSMR	Q99650	979 aa		10.62	□□□□□ -0.71
CACNA1A-256	ENST00000637981	ELAC1	Q9H777	363 aa	Known RBP	10.62	□□□□□ -0.71
CACNA1A-256	ENST00000637981	AGO4	Q9HCK5	861 aa	Known RBP	10.62	□□□□□ -0.71
CACNA1A-256	ENST00000637981	NGRN	Q9NPE2	291 aa	Known RBP	10.62	□□□□□ -0.71
CACNA1A-256	ENST00000637981	RTN4	Q9NQC3	1192 aa	Known RBP	10.62	□□□□□ -0.71
CACNA1A-256	ENST00000637981	CDH22	Q9UJ99	828 aa		10.62	□□□□□ -0.71
CACNA1A-256	ENST00000637981	SORCS3	Q9UPU3	1222 aa		10.62	□□□□□ -0.71
CACNA1A-256	ENST00000637981	PLXNA3	P51805	1871 aa		10.62	□□□□□ -0.71
CACNA1A-256	ENST00000637981	COL1A2	P08123	1366 aa		10.62	□□□□□ -0.71
CACNA1A-256	ENST00000637981	C2CD4D	B7Z1M9	353 aa		10.61	□□□□□ -0.71
CACNA1A-256	ENST00000637981	ADAMTS3	O15072	1205 aa		10.61	□□□□□ -0.71
CACNA1A-256	ENST00000637981	BRD1	O95696	1058 aa		10.61	□□□□□ -0.71
CACNA1A-256	ENST00000637981	CCNE2	O96020	404 aa		10.61	□□□□□ -0.71
CACNA1A-256	ENST00000637981	PBX3	P40426	434 aa		10.61	□□□□□ -0.71
CACNA1A-256	ENST00000637981	CRYBB1	P53674	252 aa	Predicted RBP	10.61	□□□□□ -0.71
CACNA1A-256	ENST00000637981	FAM189B	P81408	668 aa		10.61	□□□□□ -0.71
CACNA1A-256	ENST00000637981	FOXK2	Q01167	660 aa		10.61	□□□□□ -0.71
CACNA1A-256	ENST00000637981	KRT17	Q04695	432 aa		10.61	□□□□□ -0.71
CACNA1A-256	ENST00000637981	ZNF484	Q5JVG2	852 aa		10.61	□□□□□ -0.71
CACNA1A-256	ENST00000637981	CES5A	Q6NT32	575 aa		10.61	□□□□□ -0.71
CACNA1A-256	ENST00000637981	PDXDC2P	Q6P474	469 aa		10.61	□□□□□ -0.71
CACNA1A-256	ENST00000637981	KCNT2	Q6UVM3	1135 aa		10.61	□□□□□ -0.71
CACNA1A-256	ENST00000637981	LRRC55	Q6ZSA7	311 aa		10.61	□□□□□ -0.71
CACNA1A-256	ENST00000637981	TMC7	Q7Z402	723 aa		10.61	□□□□□ -0.71
CACNA1A-256	ENST00000637981	CCDC60	Q8IWA6	550 aa	Predicted RBP	10.61	□□□□□ -0.71
CACNA1A-256	ENST00000637981	CRYGN	Q8WXF5	182 aa		10.61	□□□□□ -0.71
CACNA1A-256	ENST00000637981	CASP10	Q92851	521 aa		10.61	□□□□□ -0.71
CACNA1A-256	ENST00000637981	TNFRSF25	Q93038	417 aa		10.61	□□□□□ -0.71
CACNA1A-256	ENST00000637981	ZNF558	Q96NG5	402 aa		10.61	□□□□□ -0.71
CACNA1A-256	ENST00000637981	CASD1	Q96PB1	797 aa		10.61	□□□□□ -0.71
CACNA1A-256	ENST00000637981	TMEM117	Q9H0C3	514 aa		10.61	□□□□□ -0.71
CACNA1A-256	ENST00000637981	POMK	Q9H5K3	350 aa		10.61	□□□□□ -0.71
CACNA1A-256	ENST00000637981	ZNF302	Q9NR11	478 aa		10.61	□□□□□ -0.71
CACNA1A-256	ENST00000637981	TCEAL9	Q9UHQ7	104 aa		10.61	□□□□□ -0.71
CACNA1A-256	ENST00000637981	CFAP54	Q96N23	3096 aa		10.61	□□□□□ -0.71
CACNA1A-256	ENST00000637981	ZDBF2	Q9HCK1	2354 aa		10.61	□□□□□ -0.71
CACNA1A-256	ENST00000637981	CYP3A7-CYP3A51P	A0A087WV96	503 aa		10.6	□□□□□ -0.71
CACNA1A-256	ENST00000637981	ZBTB42	B2RXF5	422 aa		10.6	□□□□□ -0.71
CACNA1A-256	ENST00000637981	MEIS1	O00470	390 aa		10.6	□□□□□ -0.71
CACNA1A-256	ENST00000637981	HOXA2	O43364	376 aa		10.6	□□□□□ -0.71
CACNA1A-256	ENST00000637981	MARCH6	O60337	910 aa		10.6	□□□□□ -0.71
CACNA1A-256	ENST00000637981	CCNT1	O60563	726 aa	Known RBP	10.6	□□□□□ -0.71
CACNA1A-256	ENST00000637981	GPR32	O75388	356 aa		10.6	□□□□□ -0.71
CACNA1A-256	ENST00000637981	BAG4	O95429	457 aa	Known RBP	10.6	□□□□□ -0.71
CACNA1A-256	ENST00000637981	VTN	P04004	478 aa		10.6	□□□□□ -0.71
CACNA1A-256	ENST00000637981	CYP3A7	P24462	503 aa		10.6	□□□□□ -0.71

Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms