RNA–Protein interactions for RNA: ENST00000637774.1

CACNA1A-248, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 3,381 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-248ENST00000637774 DMTNQ08495 405 aa10.54□□□□□ -0.72
CACNA1A-248ENST00000637774 WHAMMP3Q1A5X7 153 aa10.54□□□□□ -0.72
CACNA1A-248ENST00000637774 COBLL1Q53SF7 1204 aa10.54□□□□□ -0.72
CACNA1A-248ENST00000637774 FIGNQ5HY92 759 aa10.54□□□□□ -0.72
CACNA1A-248ENST00000637774 CATSPERGQ6ZRH7 1159 aa10.54□□□□□ -0.72
CACNA1A-248ENST00000637774 PPP1R3FQ6ZSY5 799 aaPredicted RBP10.54□□□□□ -0.72
CACNA1A-248ENST00000637774 CBWD2Q8IUF1 395 aa10.54□□□□□ -0.72
CACNA1A-248ENST00000637774 GSPT2Q8IYD1 628 aaKnown RBP10.54□□□□□ -0.72
CACNA1A-248ENST00000637774 METTL13Q8N6R0 699 aa10.54□□□□□ -0.72
CACNA1A-248ENST00000637774 MS4A14Q96JA4 679 aa10.54□□□□□ -0.72
CACNA1A-248ENST00000637774 SCLT1Q96NL6 688 aa10.54□□□□□ -0.72
CACNA1A-248ENST00000637774 FNBP1Q96RU3 617 aa10.54□□□□□ -0.72
CACNA1A-248ENST00000637774 CYP39A1Q9NYL5 469 aa10.54□□□□□ -0.72
CACNA1A-248ENST00000637774 HSPBP1Q9NZL4 362 aa10.54□□□□□ -0.72
CACNA1A-248ENST00000637774 ZNF214Q9UL59 606 aaPredicted RBP10.54□□□□□ -0.72
CACNA1A-248ENST00000637774 LTBP1Q14766 1721 aa10.54□□□□□ -0.72
CACNA1A-248ENST00000637774 FRMPD4Q14CM0 1322 aa10.53□□□□□ -0.72
CACNA1A-248ENST00000637774 DHX15O43143 795 aaKnown RBP10.53□□□□□ -0.72
CACNA1A-248ENST00000637774 SRGAP2CP0DJJ0 459 aa10.53□□□□□ -0.72
CACNA1A-248ENST00000637774 MXI1P50539 228 aa10.53□□□□□ -0.72
CACNA1A-248ENST00000637774 VAMP7P51809 220 aa10.53□□□□□ -0.72
CACNA1A-248ENST00000637774 PPARDQ03181 441 aa10.53□□□□□ -0.72
CACNA1A-248ENST00000637774 SEZ6Q53EL9 994 aa10.53□□□□□ -0.72
CACNA1A-248ENST00000637774 IQCEQ6IPM2 695 aa10.53□□□□□ -0.72
CACNA1A-248ENST00000637774 CCDC60Q8IWA6 550 aaPredicted RBP10.53□□□□□ -0.72
CACNA1A-248ENST00000637774 DAW1Q8N136 415 aa10.53□□□□□ -0.72
CACNA1A-248ENST00000637774 DEPTORQ8TB45 409 aa10.53□□□□□ -0.72
CACNA1A-248ENST00000637774 NEK9Q8TD19 979 aa10.53□□□□□ -0.72
CACNA1A-248ENST00000637774 ZNF526Q8TF50 670 aaPredicted RBP10.53□□□□□ -0.72
CACNA1A-248ENST00000637774 COG1Q8WTW3 980 aa10.53□□□□□ -0.72
CACNA1A-248ENST00000637774 FAM213AQ9BRX8 229 aa10.53□□□□□ -0.72
CACNA1A-248ENST00000637774 TMEM206Q9H813 350 aa10.53□□□□□ -0.72
CACNA1A-248ENST00000637774 FRMD3A2A2Y4 597 aa10.53□□□□□ -0.72
CACNA1A-248ENST00000637774 KCNK3O14649 394 aa10.53□□□□□ -0.72
CACNA1A-248ENST00000637774 IBSPP21815 317 aaPredicted RBP10.53□□□□□ -0.72
CACNA1A-248ENST00000637774 CKAP4Q07065 602 aaKnown RBP10.53□□□□□ -0.72
CACNA1A-248ENST00000637774 BFSP1Q12934 665 aa10.53□□□□□ -0.72
CACNA1A-248ENST00000637774 STRN3Q13033 797 aa10.53□□□□□ -0.72
CACNA1A-248ENST00000637774 MIS18BP1Q6P0N0 1132 aa10.53□□□□□ -0.72
CACNA1A-248ENST00000637774 KLHL7Q8IXQ5 586 aa10.53□□□□□ -0.72
CACNA1A-248ENST00000637774 GOLGA5Q8TBA6 731 aa10.53□□□□□ -0.72
CACNA1A-248ENST00000637774 AZI2Q9H6S1 392 aa10.53□□□□□ -0.72
CACNA1A-248ENST00000637774 ADARB2Q9NS39 739 aaKnown RBP10.53□□□□□ -0.72
CACNA1A-248ENST00000637774 EXOC7Q9UPT5 735 aa10.53□□□□□ -0.72
CACNA1A-248ENST00000637774 CEP104O60308 925 aa10.52□□□□□ -0.72
CACNA1A-248ENST00000637774 EVI5O60447 810 aa10.52□□□□□ -0.72
CACNA1A-248ENST00000637774 H2AFZP0C0S5 128 aa10.52□□□□□ -0.72
CACNA1A-248ENST00000637774 SFNP31947 248 aa10.52□□□□□ -0.72
CACNA1A-248ENST00000637774 NPTX2P47972 431 aa10.52□□□□□ -0.72
CACNA1A-248ENST00000637774 OSTNP61366 133 aa10.52□□□□□ -0.72
CACNA1A-248ENST00000637774 KCTD2Q14681 263 aa10.52□□□□□ -0.72
CACNA1A-248ENST00000637774 HSP90B2PQ58FF3 399 aa10.52□□□□□ -0.72
CACNA1A-248ENST00000637774 NAA35Q5VZE5 725 aa10.52□□□□□ -0.72
CACNA1A-248ENST00000637774 H2AFVQ71UI9 128 aa10.52□□□□□ -0.72
CACNA1A-248ENST00000637774 ANO5Q75V66 913 aa10.52□□□□□ -0.72
CACNA1A-248ENST00000637774 DHX37Q8IY37 1157 aaKnown RBP10.52□□□□□ -0.72
CACNA1A-248ENST00000637774 PROCA1Q8NCQ7 364 aaPredicted RBP10.52□□□□□ -0.72
CACNA1A-248ENST00000637774 SLC7A3Q8WY07 619 aa10.52□□□□□ -0.72
CACNA1A-248ENST00000637774 IFT81Q8WYA0 676 aa10.52□□□□□ -0.72
CACNA1A-248ENST00000637774 POLR3FQ9H1D9 316 aaPredicted RBP10.52□□□□□ -0.72
CACNA1A-248ENST00000637774 ACP6Q9NPH0 428 aa10.52□□□□□ -0.72
CACNA1A-248ENST00000637774 OGFRQ9NZT2 677 aa10.52□□□□□ -0.72
CACNA1A-248ENST00000637774 JRKLQ9Y4A0 524 aa10.52□□□□□ -0.72
CACNA1A-248ENST00000637774 CNGA1P29973 690 aa10.52□□□□□ -0.73
CACNA1A-248ENST00000637774 SSTR3P32745 418 aaPredicted RBP10.52□□□□□ -0.73
CACNA1A-248ENST00000637774 ACOT2P49753 483 aa10.52□□□□□ -0.73
CACNA1A-248ENST00000637774 ZNF571Q7Z3V5 609 aaPredicted RBP10.52□□□□□ -0.73
CACNA1A-248ENST00000637774 DAAM2Q86T65 1068 aa10.52□□□□□ -0.73
CACNA1A-248ENST00000637774 TRIM50Q86XT4 487 aa10.52□□□□□ -0.73
CACNA1A-248ENST00000637774 INTS2Q9H0H0 1204 aaKnown RBP10.52□□□□□ -0.73
CACNA1A-248ENST00000637774 TOPORSQ9NS56 1045 aaPredicted RBP10.52□□□□□ -0.73
CACNA1A-248ENST00000637774 SALL4Q9UJQ4 1053 aa10.52□□□□□ -0.73
CACNA1A-248ENST00000637774 ERICH4A6NGS2 130 aa10.52□□□□□ -0.73
CACNA1A-248ENST00000637774 EIF3DO15371 548 aaKnown RBP eCLIP10.52□□□□□ -0.73
CACNA1A-248ENST00000637774 GGPS1O95749 300 aa10.52□□□□□ -0.73
CACNA1A-248ENST00000637774 FDX1P10109 184 aa10.52□□□□□ -0.73
CACNA1A-248ENST00000637774 ZSCAN20P17040 1043 aaPredicted RBP10.52□□□□□ -0.73
CACNA1A-248ENST00000637774 GUCY2CP25092 1073 aa10.52□□□□□ -0.73
CACNA1A-248ENST00000637774 SSR1P43307 286 aaKnown RBP10.52□□□□□ -0.73
CACNA1A-248ENST00000637774 SLC18A3Q16572 532 aa10.52□□□□□ -0.73
CACNA1A-248ENST00000637774 ZBTB33Q86T24 672 aa10.52□□□□□ -0.73
CACNA1A-248ENST00000637774 CDR2LQ86X02 465 aaPredicted RBP10.52□□□□□ -0.73
CACNA1A-248ENST00000637774 CTNNBL1Q8WYA6 563 aaPredicted RBP10.52□□□□□ -0.73
CACNA1A-248ENST00000637774 CDHR1Q96JP9 859 aa10.52□□□□□ -0.73
CACNA1A-248ENST00000637774 CEP89Q96ST8 783 aa10.52□□□□□ -0.73
CACNA1A-248ENST00000637774 PNKPQ96T60 521 aa10.52□□□□□ -0.73
CACNA1A-248ENST00000637774 SYT17Q9BSW7 474 aa10.52□□□□□ -0.73
CACNA1A-248ENST00000637774 PI4K2AQ9BTU6 479 aa10.52□□□□□ -0.73
CACNA1A-248ENST00000637774 ABCB6Q9NP58 842 aa10.52□□□□□ -0.73
CACNA1A-248ENST00000637774 ZNF302Q9NR11 478 aa10.52□□□□□ -0.73
CACNA1A-248ENST00000637774 TRPC6Q9Y210 931 aa10.52□□□□□ -0.73
CACNA1A-248ENST00000637774 ZNF862O60290 1169 aa10.51□□□□□ -0.73
CACNA1A-248ENST00000637774 BCRP11274 1271 aa10.51□□□□□ -0.73
CACNA1A-248ENST00000637774 VSNL1P62760 191 aa10.51□□□□□ -0.73
CACNA1A-248ENST00000637774 MAP3K10Q02779 954 aa10.51□□□□□ -0.73
CACNA1A-248ENST00000637774 LY6KQ17RY6 165 aa10.51□□□□□ -0.73
CACNA1A-248ENST00000637774 LONRF2Q1L5Z9 754 aa10.51□□□□□ -0.73
CACNA1A-248ENST00000637774 MAP1SQ66K74 1059 aaPredicted RBP10.51□□□□□ -0.73
CACNA1A-248ENST00000637774 RBM46Q8TBY0 533 aaKnown RBP10.51□□□□□ -0.73
CACNA1A-248ENST00000637774 KAT5Q92993 513 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms