RNA–Protein interactions for RNA: ENST00000637450.1

CLN6-220, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 3

Gene CLN6, Length 868 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-220ENST00000637450 NGRNQ9NPE2 291 aaKnown RBP20.74■□□□□ 0.91
CLN6-220ENST00000637450 SUCLA2Q9P2R7 463 aaPredicted RBP20.74■□□□□ 0.91
CLN6-220ENST00000637450 MUTYHQ9UIF7 546 aa20.74■□□□□ 0.91
CLN6-220ENST00000637450 USP15Q9Y4E8 981 aaPredicted RBP20.74■□□□□ 0.91
CLN6-220ENST00000637450 A0A087WZ62 844 aa20.73■□□□□ 0.91
CLN6-220ENST00000637450 PBX3P40426 434 aa20.73■□□□□ 0.91
CLN6-220ENST00000637450 KRT17Q04695 432 aa20.73■□□□□ 0.91
CLN6-220ENST00000637450 PPP2R5CQ13362 524 aa20.73■□□□□ 0.91
CLN6-220ENST00000637450 KCNC3Q14003 757 aa20.73■□□□□ 0.91
CLN6-220ENST00000637450 PLPP4Q5VZY2 271 aa20.73■□□□□ 0.91
CLN6-220ENST00000637450 PPP4R3AQ6IN85 833 aa20.73■□□□□ 0.91
CLN6-220ENST00000637450 TMEM184AQ6ZMB5 413 aa20.73■□□□□ 0.91
CLN6-220ENST00000637450 ZNF410Q86VK4 478 aa20.73■□□□□ 0.91
CLN6-220ENST00000637450 HELQQ8TDG4 1101 aa20.73■□□□□ 0.91
CLN6-220ENST00000637450 FAM20AQ96MK3 541 aa20.73■□□□□ 0.91
CLN6-220ENST00000637450 TCF25Q9BQ70 676 aa20.73■□□□□ 0.91
CLN6-220ENST00000637450 FDXACB1Q9BRP7 624 aaPredicted RBP20.73■□□□□ 0.91
CLN6-220ENST00000637450 TRAIPQ9BWF2 469 aa20.73■□□□□ 0.91
CLN6-220ENST00000637450 SLKQ9H2G2 1235 aaPredicted RBP20.73■□□□□ 0.91
CLN6-220ENST00000637450 SPG21Q9NZD8 308 aa20.73■□□□□ 0.91
CLN6-220ENST00000637450 VAV3Q9UKW4 847 aa20.73■□□□□ 0.91
CLN6-220ENST00000637450 TPCN1Q9ULQ1 816 aa20.73■□□□□ 0.91
CLN6-220ENST00000637450 PLXNA4Q9HCM2 1894 aa20.73■□□□□ 0.91
CLN6-220ENST00000637450 CCDC194A0A1B0GVG4 234 aa20.72■□□□□ 0.91
CLN6-220ENST00000637450 LOC730098B7Z3J9 87 aa20.72■□□□□ 0.91
CLN6-220ENST00000637450 PFKFB2O60825 505 aa20.72■□□□□ 0.91
CLN6-220ENST00000637450 XBP1P17861 261 aa20.72■□□□□ 0.91
CLN6-220ENST00000637450 CBX2Q14781 532 aaPredicted RBP20.72■□□□□ 0.91
CLN6-220ENST00000637450 NEK8Q86SG6 692 aa20.72■□□□□ 0.91
CLN6-220ENST00000637450 RHPN2Q8IUC4 686 aa20.72■□□□□ 0.91
CLN6-220ENST00000637450 SUSD6Q92537 303 aa20.72■□□□□ 0.91
CLN6-220ENST00000637450 JPH2Q9BR39 696 aaPredicted RBP20.72■□□□□ 0.91
CLN6-220ENST00000637450 INO80BQ9C086 356 aaPredicted RBP20.72■□□□□ 0.91
CLN6-220ENST00000637450 STK36Q9NRP7 1315 aa20.72■□□□□ 0.91
CLN6-220ENST00000637450 HIDE1A8MVS5 230 aa20.71■□□□□ 0.91
CLN6-220ENST00000637450 GCFC2P16383 781 aaKnown RBP20.71■□□□□ 0.91
CLN6-220ENST00000637450 SFPQP23246 707 aaKnown RBP eCLIP20.71■□□□□ 0.91
CLN6-220ENST00000637450 PHKA2P46019 1235 aa20.71■□□□□ 0.91
CLN6-220ENST00000637450 QARSP47897 775 aaKnown RBP20.71■□□□□ 0.91
CLN6-220ENST00000637450 SLC39A11Q8N1S5 342 aa20.71■□□□□ 0.91
CLN6-220ENST00000637450 OXER1Q8TDS5 423 aa20.71■□□□□ 0.91
CLN6-220ENST00000637450 PHF7Q9BWX1 381 aaPredicted RBP20.71■□□□□ 0.91
CLN6-220ENST00000637450 S1PR5Q9H228 398 aa20.71■□□□□ 0.91
CLN6-220ENST00000637450 ENTPD7Q9NQZ7 604 aa20.71■□□□□ 0.91
CLN6-220ENST00000637450 CYP26B1Q9NR63 512 aa20.71■□□□□ 0.91
CLN6-220ENST00000637450 WDR81Q562E7 1941 aa20.7■□□□□ 0.91
CLN6-220ENST00000637450 TBX3O15119 743 aa20.7■□□□□ 0.9
CLN6-220ENST00000637450 DKC1O60832 514 aaKnown RBP eCLIP20.7■□□□□ 0.9
CLN6-220ENST00000637450 P4HBP07237 508 aaKnown RBP20.7■□□□□ 0.9
CLN6-220ENST00000637450 SRGAP2BP0DMP2 458 aa20.7■□□□□ 0.9
CLN6-220ENST00000637450 HOXD11P31277 338 aaPredicted RBP20.7■□□□□ 0.9
CLN6-220ENST00000637450 PLA2G4FQ68DD2 849 aa20.7■□□□□ 0.9
CLN6-220ENST00000637450 TMC7Q7Z402 723 aa20.7■□□□□ 0.9
CLN6-220ENST00000637450 KSR1Q8IVT5 923 aa20.7■□□□□ 0.9
CLN6-220ENST00000637450 EDAQ92838 391 aa20.7■□□□□ 0.9
CLN6-220ENST00000637450 HAS1Q92839 578 aa20.7■□□□□ 0.9
CLN6-220ENST00000637450 MRPL9Q9BYD2 267 aaKnown RBP20.7■□□□□ 0.9
CLN6-220ENST00000637450 GJB4Q9NTQ9 266 aa20.7■□□□□ 0.9
CLN6-220ENST00000637450 MUC6Q6W4X9 2439 aa20.69■□□□□ 0.9
CLN6-220ENST00000637450 CCNT1O60563 726 aaKnown RBP20.69■□□□□ 0.9
CLN6-220ENST00000637450 DTNBO60941 627 aa20.69■□□□□ 0.9
CLN6-220ENST00000637450 CTDNEP1O95476 244 aa20.69■□□□□ 0.9
CLN6-220ENST00000637450 SKIP12755 728 aa20.69■□□□□ 0.9
CLN6-220ENST00000637450 TECP42680 631 aa20.69■□□□□ 0.9
CLN6-220ENST00000637450 ALDH7A1P49419 539 aaKnown RBP20.69■□□□□ 0.9
CLN6-220ENST00000637450 NPEPPSP55786 919 aa20.69■□□□□ 0.9
CLN6-220ENST00000637450 TWF2Q6IBS0 349 aaKnown RBP20.69■□□□□ 0.9
CLN6-220ENST00000637450 ANKRD54Q6NXT1 300 aa20.69■□□□□ 0.9
CLN6-220ENST00000637450 PIK3AP1Q6ZUJ8 805 aa20.69■□□□□ 0.9
CLN6-220ENST00000637450 HFE2Q6ZVN8 426 aa20.69■□□□□ 0.9
CLN6-220ENST00000637450 MRPL43Q8N983 215 aaKnown RBP20.69■□□□□ 0.9
CLN6-220ENST00000637450 ZNF579Q8NAF0 562 aaKnown RBP20.69■□□□□ 0.9
CLN6-220ENST00000637450 RSPH1Q8WYR4 309 aa20.69■□□□□ 0.9
CLN6-220ENST00000637450 NAP1L4Q99733 375 aaKnown RBP20.69■□□□□ 0.9
CLN6-220ENST00000637450 IFT122Q9HBG6 1241 aa20.69■□□□□ 0.9
CLN6-220ENST00000637450 WRAP73Q9P2S5 460 aaPredicted RBP20.69■□□□□ 0.9
CLN6-220ENST00000637450 PIN4Q9Y237 131 aaKnown RBP20.69■□□□□ 0.9
CLN6-220ENST00000637450 PPME1Q9Y570 386 aa20.69■□□□□ 0.9
CLN6-220ENST00000637450 ZNF623O75123 536 aa20.68■□□□□ 0.9
CLN6-220ENST00000637450 BCAR1P56945 870 aa20.68■□□□□ 0.9
CLN6-220ENST00000637450 EPHA7Q15375 998 aa20.68■□□□□ 0.9
CLN6-220ENST00000637450 EARS2Q5JPH6 523 aaKnown RBP20.68■□□□□ 0.9
CLN6-220ENST00000637450 SYCE2Q6PIF2 218 aa20.68■□□□□ 0.9
CLN6-220ENST00000637450 CATSPER4Q7RTX7 472 aa20.68■□□□□ 0.9
CLN6-220ENST00000637450 EXOC8Q8IYI6 725 aa20.68■□□□□ 0.9
CLN6-220ENST00000637450 SLC7A3Q8WY07 619 aa20.68■□□□□ 0.9
CLN6-220ENST00000637450 CEP170P1Q96L14 293 aa20.68■□□□□ 0.9
CLN6-220ENST00000637450 NLRP4Q96MN2 994 aa20.68■□□□□ 0.9
CLN6-220ENST00000637450 DHX33Q9H6R0 707 aaKnown RBP20.68■□□□□ 0.9
CLN6-220ENST00000637450 C2orf71A6NGG8 1288 aa20.67■□□□□ 0.9
CLN6-220ENST00000637450 NT5C1B-RDH14C9J2C7 533 aa20.67■□□□□ 0.9
CLN6-220ENST00000637450 ANAPC15P60006 121 aa20.67■□□□□ 0.9
CLN6-220ENST00000637450 SMC1AQ14683 1233 aaKnown RBP20.67■□□□□ 0.9
CLN6-220ENST00000637450 ANKRD1Q15327 319 aa20.67■□□□□ 0.9
CLN6-220ENST00000637450 LLGL2Q6P1M3 1020 aa20.67■□□□□ 0.9
CLN6-220ENST00000637450 C4orf19Q8IY42 314 aa20.67■□□□□ 0.9
CLN6-220ENST00000637450 PRPF31Q8WWY3 499 aaKnown RBP20.67■□□□□ 0.9
CLN6-220ENST00000637450 WASF1Q92558 559 aa20.67■□□□□ 0.9
CLN6-220ENST00000637450 LPPQ93052 612 aa20.67■□□□□ 0.9
CLN6-220ENST00000637450 RPGRIP1Q96KN7 1286 aa20.67■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms