RNA–Protein interactions for RNA: ENST00000637439.1

CIITA-215, Transcript of class II major histocompatibility complex transactivator, humanhuman

TSL 5

Gene CIITA, Length 850 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-215ENST00000637439 Q4G0T1 1027 aa20.12■□□□□ 0.81
CIITA-215ENST00000637439 XKR3Q5GH77 459 aa20.12■□□□□ 0.81
CIITA-215ENST00000637439 MIER3Q7Z3K6 550 aa20.12■□□□□ 0.81
CIITA-215ENST00000637439 ZBTB33Q86T24 672 aa20.12■□□□□ 0.81
CIITA-215ENST00000637439 TRIM22Q8IYM9 498 aa20.12■□□□□ 0.81
CIITA-215ENST00000637439 ZNF668Q96K58 619 aaPredicted RBP20.12■□□□□ 0.81
CIITA-215ENST00000637439 NIFKQ9BYG3 293 aaKnown RBP20.12■□□□□ 0.81
CIITA-215ENST00000637439 INO80BQ9C086 356 aaPredicted RBP20.12■□□□□ 0.81
CIITA-215ENST00000637439 C2orf71A6NGG8 1288 aa20.11■□□□□ 0.81
CIITA-215ENST00000637439 PSMD10O75832 226 aa20.11■□□□□ 0.81
CIITA-215ENST00000637439 SFPQP23246 707 aaKnown RBP eCLIP20.11■□□□□ 0.81
CIITA-215ENST00000637439 EVCP57679 992 aa20.11■□□□□ 0.81
CIITA-215ENST00000637439 IER5LQ5T953 404 aa20.11■□□□□ 0.81
CIITA-215ENST00000637439 TBCKQ8TEA7 893 aa20.11■□□□□ 0.81
CIITA-215ENST00000637439 ASIC4Q96FT7 647 aa20.11■□□□□ 0.81
CIITA-215ENST00000637439 TMEM169Q96HH4 297 aa20.11■□□□□ 0.81
CIITA-215ENST00000637439 TRAIPQ9BWF2 469 aa20.11■□□□□ 0.81
CIITA-215ENST00000637439 APOL5Q9BWW9 433 aa20.11■□□□□ 0.81
CIITA-215ENST00000637439 IRF2BPLQ9H1B7 796 aa20.11■□□□□ 0.81
CIITA-215ENST00000637439 SEPT9Q9UHD8 586 aaPredicted RBP20.11■□□□□ 0.81
CIITA-215ENST00000637439 HCFC2Q9Y5Z7 792 aa20.11■□□□□ 0.81
CIITA-215ENST00000637439 CYP3A7-CYP3A51PA0A087WV96 503 aa20.1■□□□□ 0.81
CIITA-215ENST00000637439 EDIL3O43854 480 aa20.1■□□□□ 0.81
CIITA-215ENST00000637439 FGFR4P22455 802 aa20.1■□□□□ 0.81
CIITA-215ENST00000637439 CYP3A7P24462 503 aa20.1■□□□□ 0.81
CIITA-215ENST00000637439 PDIA3P30101 505 aaKnown RBP20.1■□□□□ 0.81
CIITA-215ENST00000637439 BCAR1P56945 870 aa20.1■□□□□ 0.81
CIITA-215ENST00000637439 MTERF2Q49AM1 385 aa20.1■□□□□ 0.81
CIITA-215ENST00000637439 ZNF410Q86VK4 478 aa20.1■□□□□ 0.81
CIITA-215ENST00000637439 ADAM7Q9H2U9 754 aa20.1■□□□□ 0.81
CIITA-215ENST00000637439 PCDHA4Q9UN74 947 aa20.1■□□□□ 0.81
CIITA-215ENST00000637439 KMT2EQ8IZD2 1858 aa20.09■□□□□ 0.81
CIITA-215ENST00000637439 IGKV6-21A0A0C4DH24 114 aa20.09■□□□□ 0.81
CIITA-215ENST00000637439 REC8O95072 547 aa20.09■□□□□ 0.81
CIITA-215ENST00000637439 MTHFRP42898 656 aa20.09■□□□□ 0.81
CIITA-215ENST00000637439 PHKA2P46019 1235 aa20.09■□□□□ 0.81
CIITA-215ENST00000637439 CCT2P78371 535 aaKnown RBP20.09■□□□□ 0.81
CIITA-215ENST00000637439 GIT2Q14161 759 aa20.09■□□□□ 0.81
CIITA-215ENST00000637439 FAM177A1Q8N128 213 aaPredicted RBP20.09■□□□□ 0.81
CIITA-215ENST00000637439 TMEM87AQ8NBN3 555 aa20.09■□□□□ 0.81
CIITA-215ENST00000637439 RIPOR3Q96MK2 946 aa20.09■□□□□ 0.81
CIITA-215ENST00000637439 JPH2Q9BR39 696 aaPredicted RBP20.09■□□□□ 0.81
CIITA-215ENST00000637439 ZDBF2Q9HCK1 2354 aa20.08■□□□□ 0.81
CIITA-215ENST00000637439 CLASP2O75122 1294 aaKnown RBP20.08■□□□□ 0.81
CIITA-215ENST00000637439 CXCL14O95715 111 aa20.08■□□□□ 0.81
CIITA-215ENST00000637439 CA8P35219 290 aa20.08■□□□□ 0.81
CIITA-215ENST00000637439 NUBP1P53384 320 aa20.08■□□□□ 0.81
CIITA-215ENST00000637439 POLGP54098 1239 aaPredicted RBP20.08■□□□□ 0.81
CIITA-215ENST00000637439 SSRP1Q08945 709 aaKnown RBP20.08■□□□□ 0.81
CIITA-215ENST00000637439 DRP2Q13474 957 aa20.08■□□□□ 0.81
CIITA-215ENST00000637439 TWF2Q6IBS0 349 aaKnown RBP20.08■□□□□ 0.81
CIITA-215ENST00000637439 MOXD1Q6UVY6 613 aa20.08■□□□□ 0.81
CIITA-215ENST00000637439 UBALD2Q8IYN6 164 aa20.08■□□□□ 0.81
CIITA-215ENST00000637439 NCOA5Q9HCD5 579 aaKnown RBP20.08■□□□□ 0.81
CIITA-215ENST00000637439 TSHZ2Q9NRE2 1034 aa20.08■□□□□ 0.81
CIITA-215ENST00000637439 DZANK1Q9NVP4 752 aa20.08■□□□□ 0.81
CIITA-215ENST00000637439 A0A087WZ62 844 aa20.07■□□□□ 0.8
CIITA-215ENST00000637439 NT5C1B-RDH14C9J2C7 533 aa20.07■□□□□ 0.8
CIITA-215ENST00000637439 ZC3H11AO75152 810 aaKnown RBP eCLIP20.07■□□□□ 0.8
CIITA-215ENST00000637439 MAFO75444 373 aaPredicted RBP20.07■□□□□ 0.8
CIITA-215ENST00000637439 CSDE1O75534 798 aaKnown RBP20.07■□□□□ 0.8
CIITA-215ENST00000637439 DEXIO95424 95 aa20.07■□□□□ 0.8
CIITA-215ENST00000637439 AVPR2P30518 371 aa20.07■□□□□ 0.8
CIITA-215ENST00000637439 RAB27AP51159 221 aa20.07■□□□□ 0.8
CIITA-215ENST00000637439 TCF15Q12870 199 aa20.07■□□□□ 0.8
CIITA-215ENST00000637439 MTMR3Q13615 1198 aa20.07■□□□□ 0.8
CIITA-215ENST00000637439 GALNT17Q6IS24 598 aa20.07■□□□□ 0.8
CIITA-215ENST00000637439 GLB1LQ6UWU2 654 aa20.07■□□□□ 0.8
CIITA-215ENST00000637439 B3GNT9Q6UX72 402 aa20.07■□□□□ 0.8
CIITA-215ENST00000637439 BLIDQ8IZY5 108 aa20.07■□□□□ 0.8
CIITA-215ENST00000637439 GJA10Q969M2 543 aa20.07■□□□□ 0.8
CIITA-215ENST00000637439 CEP89Q96ST8 783 aa20.07■□□□□ 0.8
CIITA-215ENST00000637439 FDXACB1Q9BRP7 624 aaPredicted RBP20.07■□□□□ 0.8
CIITA-215ENST00000637439 SUCLA2Q9P2R7 463 aaPredicted RBP20.07■□□□□ 0.8
CIITA-215ENST00000637439 SORCS3Q9UPU3 1222 aa20.07■□□□□ 0.8
CIITA-215ENST00000637439 PIN4Q9Y237 131 aaKnown RBP20.07■□□□□ 0.8
CIITA-215ENST00000637439 IRAK3Q9Y616 596 aa20.07■□□□□ 0.8
CIITA-215ENST00000637439 DDX11L8A8MPP1 907 aa20.06■□□□□ 0.8
CIITA-215ENST00000637439 CPLX1O14810 134 aa20.06■□□□□ 0.8
CIITA-215ENST00000637439 STBD1O95210 358 aa20.06■□□□□ 0.8
CIITA-215ENST00000637439 TDP2O95551 362 aa20.06■□□□□ 0.8
CIITA-215ENST00000637439 SP100P23497 879 aaPredicted RBP20.06■□□□□ 0.8
CIITA-215ENST00000637439 RUFY3Q7L099 469 aa20.06■□□□□ 0.8
CIITA-215ENST00000637439 DDX53Q86TM3 631 aaKnown RBP20.06■□□□□ 0.8
CIITA-215ENST00000637439 RHPN2Q8IUC4 686 aa20.06■□□□□ 0.8
CIITA-215ENST00000637439 VPS52Q8N1B4 723 aa20.06■□□□□ 0.8
CIITA-215ENST00000637439 DAGLBQ8NCG7 672 aa20.06■□□□□ 0.8
CIITA-215ENST00000637439 KREMEN2Q8NCW0 462 aa20.06■□□□□ 0.8
CIITA-215ENST00000637439 MBOAT7Q96N66 472 aa20.06■□□□□ 0.8
CIITA-215ENST00000637439 ZBP1Q9H171 429 aa20.06■□□□□ 0.8
CIITA-215ENST00000637439 POMKQ9H5K3 350 aa20.06■□□□□ 0.8
CIITA-215ENST00000637439 STK39Q9UEW8 545 aa20.06■□□□□ 0.8
CIITA-215ENST00000637439 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP20.05■□□□□ 0.8
CIITA-215ENST00000637439 DKC1O60832 514 aaKnown RBP eCLIP20.05■□□□□ 0.8
CIITA-215ENST00000637439 ZNF623O75123 536 aa20.05■□□□□ 0.8
CIITA-215ENST00000637439 CTSAP10619 480 aa20.05■□□□□ 0.8
CIITA-215ENST00000637439 VCPP55072 806 aaKnown RBP20.05■□□□□ 0.8
CIITA-215ENST00000637439 PSMC5P62195 406 aa20.05■□□□□ 0.8
CIITA-215ENST00000637439 RNASELQ05823 741 aaKnown RBP20.05■□□□□ 0.8
CIITA-215ENST00000637439 NOMO2Q5JPE7 1267 aa20.05■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms