RNA–Protein interactions for RNA: ENST00000637223.1

CLN6-218, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 652 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-218ENST00000637223 DBF4BQ8NFT6 615 aa19.07■□□□□ 0.64
CLN6-218ENST00000637223 DHX58Q96C10 678 aa19.07■□□□□ 0.64
CLN6-218ENST00000637223 FDXACB1Q9BRP7 624 aaPredicted RBP19.07■□□□□ 0.64
CLN6-218ENST00000637223 AGO3Q9H9G7 860 aaKnown RBP19.07■□□□□ 0.64
CLN6-218ENST00000637223 NOC2LQ9Y3T9 749 aaKnown RBP19.07■□□□□ 0.64
CLN6-218ENST00000637223 TANC1Q9C0D5 1861 aa19.07■□□□□ 0.64
CLN6-218ENST00000637223 ARID2Q68CP9 1835 aa19.07■□□□□ 0.64
CLN6-218ENST00000637223 POLR2DO15514 142 aaKnown RBP19.06■□□□□ 0.64
CLN6-218ENST00000637223 HIP1RO75146 1068 aa19.06■□□□□ 0.64
CLN6-218ENST00000637223 CSDE1O75534 798 aaKnown RBP19.06■□□□□ 0.64
CLN6-218ENST00000637223 FGBP02675 491 aa19.06■□□□□ 0.64
CLN6-218ENST00000637223 FOSL2P15408 326 aa19.06■□□□□ 0.64
CLN6-218ENST00000637223 PFKFB1P16118 471 aa19.06■□□□□ 0.64
CLN6-218ENST00000637223 CDC42EP1Q00587 391 aa19.06■□□□□ 0.64
CLN6-218ENST00000637223 CACNB1Q02641 598 aaPredicted RBP19.06■□□□□ 0.64
CLN6-218ENST00000637223 CAPSQ13938 189 aa19.06■□□□□ 0.64
CLN6-218ENST00000637223 MXD4Q14582 209 aaPredicted RBP19.06■□□□□ 0.64
CLN6-218ENST00000637223 E2F4Q16254 413 aa19.06■□□□□ 0.64
CLN6-218ENST00000637223 PLEKHG4Q58EX7 1191 aa19.06■□□□□ 0.64
CLN6-218ENST00000637223 ARSHQ5FYA8 562 aa19.06■□□□□ 0.64
CLN6-218ENST00000637223 OTOP2Q7RTS6 562 aa19.06■□□□□ 0.64
CLN6-218ENST00000637223 ZNF410Q86VK4 478 aa19.06■□□□□ 0.64
CLN6-218ENST00000637223 ZNF710Q8N1W2 664 aa19.06■□□□□ 0.64
CLN6-218ENST00000637223 RNF149Q8NC42 400 aa19.06■□□□□ 0.64
CLN6-218ENST00000637223 BSNDQ8WZ55 320 aa19.06■□□□□ 0.64
CLN6-218ENST00000637223 IFIH1Q9BYX4 1025 aaKnown RBP19.06■□□□□ 0.64
CLN6-218ENST00000637223 GCOM2Q9BZD3 368 aaPredicted RBP19.06■□□□□ 0.64
CLN6-218ENST00000637223 TTYH1Q9H313 450 aaPredicted RBP19.06■□□□□ 0.64
CLN6-218ENST00000637223 KCNH3Q9ULD8 1083 aa19.06■□□□□ 0.64
CLN6-218ENST00000637223 SPTBN5Q9NRC6 3674 aaKnown RBP19.06■□□□□ 0.64
CLN6-218ENST00000637223 A0A1W2PQ27 194 aa19.05■□□□□ 0.64
CLN6-218ENST00000637223 A0A1W2PQ64 194 aa19.05■□□□□ 0.64
CLN6-218ENST00000637223 A0A1W2PQD8 194 aa19.05■□□□□ 0.64
CLN6-218ENST00000637223 ASAP2O43150 1006 aa19.05■□□□□ 0.64
CLN6-218ENST00000637223 RPS6KA5O75582 802 aa19.05■□□□□ 0.64
CLN6-218ENST00000637223 KRT18P05783 430 aaKnown RBP19.05■□□□□ 0.64
CLN6-218ENST00000637223 DARSP14868 501 aaKnown RBP19.05■□□□□ 0.64
CLN6-218ENST00000637223 FGFR4P22455 802 aa19.05■□□□□ 0.64
CLN6-218ENST00000637223 GUCY2CP25092 1073 aa19.05■□□□□ 0.64
CLN6-218ENST00000637223 PAK2Q13177 524 aa19.05■□□□□ 0.64
CLN6-218ENST00000637223 CNKSR3Q6P9H4 555 aa19.05■□□□□ 0.64
CLN6-218ENST00000637223 SV2BQ7L1I2 683 aa19.05■□□□□ 0.64
CLN6-218ENST00000637223 FAM228AQ86W67 206 aa19.05■□□□□ 0.64
CLN6-218ENST00000637223 DAW1Q8N136 415 aa19.05■□□□□ 0.64
CLN6-218ENST00000637223 FSIP1Q8NA03 581 aa19.05■□□□□ 0.64
CLN6-218ENST00000637223 SEPT8Q92599 483 aa19.05■□□□□ 0.64
CLN6-218ENST00000637223 KIFAP3Q92845 792 aa19.05■□□□□ 0.64
CLN6-218ENST00000637223 GOLPH3LQ9H4A5 285 aa19.05■□□□□ 0.64
CLN6-218ENST00000637223 PADI3Q9ULW8 664 aa19.05■□□□□ 0.64
CLN6-218ENST00000637223 EYSQ5T1H1 3165 aa19.05■□□□□ 0.64
CLN6-218ENST00000637223 GOLGA6L4A6NEF3 574 aa19.04■□□□□ 0.64
CLN6-218ENST00000637223 LRRIQ4A6NIV6 560 aa19.04■□□□□ 0.64
CLN6-218ENST00000637223 SFI1A8K8P3 1242 aa19.04■□□□□ 0.64
CLN6-218ENST00000637223 EIF4BP23588 611 aaKnown RBP19.04■□□□□ 0.64
CLN6-218ENST00000637223 NFX1Q12986 1120 aaKnown RBP19.04■□□□□ 0.64
CLN6-218ENST00000637223 MAPK7Q13164 816 aa19.04■□□□□ 0.64
CLN6-218ENST00000637223 TFDP1Q14186 410 aa19.04■□□□□ 0.64
CLN6-218ENST00000637223 IQUBQ8NA54 791 aa19.04■□□□□ 0.64
CLN6-218ENST00000637223 USP38Q8NB14 1042 aa19.04■□□□□ 0.64
CLN6-218ENST00000637223 MRPS27Q92552 414 aaKnown RBP19.04■□□□□ 0.64
CLN6-218ENST00000637223 STAMQ92783 540 aa19.04■□□□□ 0.64
CLN6-218ENST00000637223 TTC28Q96AY4 2481 aa19.04■□□□□ 0.64
CLN6-218ENST00000637223 REEP2Q9BRK0 252 aa19.04■□□□□ 0.64
CLN6-218ENST00000637223 IFT122Q9HBG6 1241 aa19.04■□□□□ 0.64
CLN6-218ENST00000637223 KCND2Q9NZV8 630 aa19.04■□□□□ 0.64
CLN6-218ENST00000637223 RAPGEFL1Q9UHV5 662 aa19.04■□□□□ 0.64
CLN6-218ENST00000637223 ST3GAL5Q9UNP4 418 aa19.04■□□□□ 0.64
CLN6-218ENST00000637223 SQORQ9Y6N5 450 aa19.04■□□□□ 0.64
CLN6-218ENST00000637223 LAMA2P24043 3122 aaKnown RBP19.03■□□□□ 0.64
CLN6-218ENST00000637223 ZBBXA8MT70 800 aa19.03■□□□□ 0.64
CLN6-218ENST00000637223 ACTN1P12814 892 aa19.03■□□□□ 0.64
CLN6-218ENST00000637223 PHKA2P46019 1235 aa19.03■□□□□ 0.64
CLN6-218ENST00000637223 NDUFA8P51970 172 aa19.03■□□□□ 0.64
CLN6-218ENST00000637223 CSPP1Q1MSJ5 1256 aa19.03■□□□□ 0.64
CLN6-218ENST00000637223 IFT74Q96LB3 600 aa19.03■□□□□ 0.64
CLN6-218ENST00000637223 RNPC3Q96LT9 517 aaKnown RBP19.03■□□□□ 0.64
CLN6-218ENST00000637223 DRC1Q96MC2 740 aa19.03■□□□□ 0.64
CLN6-218ENST00000637223 TIPINQ9BVW5 301 aa19.03■□□□□ 0.64
CLN6-218ENST00000637223 ERVK-5Q9HDB9 667 aa19.03■□□□□ 0.64
CLN6-218ENST00000637223 HPSEQ9Y251 543 aa19.03■□□□□ 0.64
CLN6-218ENST00000637223 SCN5AQ14524 2016 aa19.03■□□□□ 0.64
CLN6-218ENST00000637223 MYMKA6NI61 221 aa19.02■□□□□ 0.64
CLN6-218ENST00000637223 TNFRSF10AO00220 468 aa19.02■□□□□ 0.64
CLN6-218ENST00000637223 PEX3P56589 373 aa19.02■□□□□ 0.64
CLN6-218ENST00000637223 PTENP60484 403 aa19.02■□□□□ 0.64
CLN6-218ENST00000637223 SMAD3P84022 425 aaKnown RBP19.02■□□□□ 0.64
CLN6-218ENST00000637223 IKBKEQ14164 716 aa19.02■□□□□ 0.64
CLN6-218ENST00000637223 DYMQ7RTS9 669 aa19.02■□□□□ 0.64
CLN6-218ENST00000637223 HERVK_113Q902F9 699 aa19.02■□□□□ 0.64
CLN6-218ENST00000637223 APBB2Q92870 758 aa19.02■□□□□ 0.64
CLN6-218ENST00000637223 KIFC3Q9BVG8 833 aa19.02■□□□□ 0.64
CLN6-218ENST00000637223 CUEDC2Q9H467 287 aa19.02■□□□□ 0.64
CLN6-218ENST00000637223 MINDY3Q9H8M7 445 aa19.02■□□□□ 0.64
CLN6-218ENST00000637223 CXXC1Q9P0U4 656 aaPredicted RBP19.02■□□□□ 0.64
CLN6-218ENST00000637223 SERTAD1Q9UHV2 236 aa19.02■□□□□ 0.64
CLN6-218ENST00000637223 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP19.01■□□□□ 0.63
CLN6-218ENST00000637223 FAM237AA0A1B0GTK4 181 aa19.01■□□□□ 0.63
CLN6-218ENST00000637223 GPR182O15218 404 aa19.01■□□□□ 0.63
CLN6-218ENST00000637223 SFPQP23246 707 aaKnown RBP eCLIP19.01■□□□□ 0.63
CLN6-218ENST00000637223 SYKP43405 635 aa19.01■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms