RNA–Protein interactions for RNA: ENST00000637083.1

CLN8-212, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLN8, Length 2,001 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-212ENST00000637083 TAAR1Q96RJ0 339 aa13.18□□□□□ -0.3
CLN8-212ENST00000637083 RMDN3Q96TC7 470 aa13.18□□□□□ -0.3
CLN8-212ENST00000637083 BCAS3Q9H6U6 928 aa13.18□□□□□ -0.3
CLN8-212ENST00000637083 SRCAPQ6ZRS2 3230 aa13.18□□□□□ -0.3
CLN8-212ENST00000637083 KIF4AO95239 1232 aa13.18□□□□□ -0.3
CLN8-212ENST00000637083 MYCLP12524 364 aaPredicted RBP13.18□□□□□ -0.3
CLN8-212ENST00000637083 VCAM1P19320 739 aa13.18□□□□□ -0.3
CLN8-212ENST00000637083 EIF2AK2P19525 551 aaKnown RBP13.18□□□□□ -0.3
CLN8-212ENST00000637083 CCND2P30279 289 aa13.18□□□□□ -0.3
CLN8-212ENST00000637083 ABCD1P33897 745 aa13.18□□□□□ -0.3
CLN8-212ENST00000637083 DRAP1Q14919 205 aaPredicted RBP13.18□□□□□ -0.3
CLN8-212ENST00000637083 OTUD6AQ7L8S5 288 aa13.18□□□□□ -0.3
CLN8-212ENST00000637083 IL31RAQ8NI17 732 aa13.18□□□□□ -0.3
CLN8-212ENST00000637083 U2AF1L4Q8WU68 220 aaKnown RBP13.18□□□□□ -0.3
CLN8-212ENST00000637083 PDCD2LQ9BRP1 358 aa13.18□□□□□ -0.3
CLN8-212ENST00000637083 RPAP3Q9H6T3 665 aaPredicted RBP13.18□□□□□ -0.3
CLN8-212ENST00000637083 PXMP2Q9NR77 195 aa13.18□□□□□ -0.3
CLN8-212ENST00000637083 RBM12Q9NTZ6 932 aaKnown RBP13.18□□□□□ -0.3
CLN8-212ENST00000637083 CALCOCO1Q9P1Z2 691 aa13.18□□□□□ -0.3
CLN8-212ENST00000637083 DIS3Q9Y2L1 958 aaKnown RBP13.18□□□□□ -0.3
CLN8-212ENST00000637083 PMM2O15305 246 aa13.17□□□□□ -0.3
CLN8-212ENST00000637083 TMEM253P0C7T8 217 aa13.17□□□□□ -0.3
CLN8-212ENST00000637083 TNFAIP3P21580 790 aa13.17□□□□□ -0.3
CLN8-212ENST00000637083 VAMP7P51809 220 aa13.17□□□□□ -0.3
CLN8-212ENST00000637083 MTMR2Q13614 643 aa13.17□□□□□ -0.3
CLN8-212ENST00000637083 CLUL1Q15846 466 aa13.17□□□□□ -0.3
CLN8-212ENST00000637083 MUM1L1Q5H9M0 696 aa13.17□□□□□ -0.3
CLN8-212ENST00000637083 ZNF746Q6NUN9 644 aaPredicted RBP13.17□□□□□ -0.3
CLN8-212ENST00000637083 PEX26Q7Z412 305 aa13.17□□□□□ -0.3
CLN8-212ENST00000637083 HAUS6Q7Z4H7 955 aa13.17□□□□□ -0.3
CLN8-212ENST00000637083 USP37Q86T82 979 aa13.17□□□□□ -0.3
CLN8-212ENST00000637083 KSR1Q8IVT5 923 aa13.17□□□□□ -0.3
CLN8-212ENST00000637083 SCYL3Q8IZE3 742 aa13.17□□□□□ -0.3
CLN8-212ENST00000637083 USP38Q8NB14 1042 aa13.17□□□□□ -0.3
CLN8-212ENST00000637083 TPCN2Q8NHX9 752 aa13.17□□□□□ -0.3
CLN8-212ENST00000637083 ACTRT1Q8TDG2 376 aa13.17□□□□□ -0.3
CLN8-212ENST00000637083 CTNNBL1Q8WYA6 563 aaPredicted RBP13.17□□□□□ -0.3
CLN8-212ENST00000637083 CAVIN3Q969G5 261 aa13.17□□□□□ -0.3
CLN8-212ENST00000637083 GPRASP2Q96D09 838 aa13.17□□□□□ -0.3
CLN8-212ENST00000637083 INPP4AQ96PE3 977 aaPredicted RBP13.17□□□□□ -0.3
CLN8-212ENST00000637083 C17orf75Q9HAS0 396 aa13.17□□□□□ -0.3
CLN8-212ENST00000637083 HOMER2Q9NSB8 354 aa13.17□□□□□ -0.3
CLN8-212ENST00000637083 SUCLA2Q9P2R7 463 aaPredicted RBP13.17□□□□□ -0.3
CLN8-212ENST00000637083 PPP1R1BQ9UD71 204 aaPredicted RBP13.17□□□□□ -0.3
CLN8-212ENST00000637083 DMGDHQ9UI17 866 aaKnown RBP13.17□□□□□ -0.3
CLN8-212ENST00000637083 KCNG1Q9UIX4 513 aa13.17□□□□□ -0.3
CLN8-212ENST00000637083 ZHX1Q9UKY1 873 aaPredicted RBP13.17□□□□□ -0.3
CLN8-212ENST00000637083 FAN1Q9Y2M0 1017 aa13.17□□□□□ -0.3
CLN8-212ENST00000637083 GOLGA6BA6NDN3 693 aa13.17□□□□□ -0.3
CLN8-212ENST00000637083 VWA5AO00534 786 aa13.17□□□□□ -0.3
CLN8-212ENST00000637083 DDX3XO00571 662 aaKnown RBP eCLIP13.17□□□□□ -0.35e-9■■■■□ 23.9
CLN8-212ENST00000637083 KCNK3O14649 394 aa13.17□□□□□ -0.3
CLN8-212ENST00000637083 OPA1O60313 960 aa13.17□□□□□ -0.3
CLN8-212ENST00000637083 ZMYND10O75800 440 aa13.17□□□□□ -0.3
CLN8-212ENST00000637083 NCKAP1LP55160 1127 aa13.17□□□□□ -0.3
CLN8-212ENST00000637083 BACE1P56817 501 aa13.17□□□□□ -0.3
CLN8-212ENST00000637083 PAK2Q13177 524 aa13.17□□□□□ -0.3
CLN8-212ENST00000637083 CBWD6Q4V339 395 aa13.17□□□□□ -0.3
CLN8-212ENST00000637083 CBWD3Q5JTY5 395 aa13.17□□□□□ -0.3
CLN8-212ENST00000637083 CBWD5Q5RIA9 395 aa13.17□□□□□ -0.3
CLN8-212ENST00000637083 ALS2CLQ60I27 953 aa13.17□□□□□ -0.3
CLN8-212ENST00000637083 SND1Q7KZF4 910 aaKnown RBP eCLIP13.17□□□□□ -0.3
CLN8-212ENST00000637083 SAMD7Q7Z3H4 446 aa13.17□□□□□ -0.3
CLN8-212ENST00000637083 LRRC57Q8N9N7 239 aa13.17□□□□□ -0.3
CLN8-212ENST00000637083 EIF1ADQ8N9N8 165 aaKnown RBP13.17□□□□□ -0.3
CLN8-212ENST00000637083 SLC30A5Q8TAD4 765 aa13.17□□□□□ -0.3
CLN8-212ENST00000637083 CDHR1Q96JP9 859 aa13.17□□□□□ -0.3
CLN8-212ENST00000637083 SENP7Q9BQF6 1050 aa13.17□□□□□ -0.3
CLN8-212ENST00000637083 PICK1Q9NRD5 415 aa13.17□□□□□ -0.3
CLN8-212ENST00000637083 MYH10P35580 1976 aa13.16□□□□□ -0.3
CLN8-212ENST00000637083 ASTN2O75129 1339 aaPredicted RBP13.16□□□□□ -0.3
CLN8-212ENST00000637083 C19orf81C9J6K1 198 aa13.16□□□□□ -0.3
CLN8-212ENST00000637083 CCDC188H7C350 402 aa13.16□□□□□ -0.3
CLN8-212ENST00000637083 STAM2O75886 525 aa13.16□□□□□ -0.3
CLN8-212ENST00000637083 TRIM49P0CI25 452 aa13.16□□□□□ -0.3
CLN8-212ENST00000637083 TRIM49CP0CI26 452 aa13.16□□□□□ -0.3
CLN8-212ENST00000637083 DGKZQ13574 1117 aa13.16□□□□□ -0.3
CLN8-212ENST00000637083 PLS1Q14651 629 aa13.16□□□□□ -0.3
CLN8-212ENST00000637083 XKR9Q5GH70 373 aa13.16□□□□□ -0.3
CLN8-212ENST00000637083 GJB7Q6PEY0 223 aa13.16□□□□□ -0.3
CLN8-212ENST00000637083 NSMFQ6X4W1 530 aa13.16□□□□□ -0.3
CLN8-212ENST00000637083 MAEAQ7L5Y9 396 aa13.16□□□□□ -0.3
CLN8-212ENST00000637083 SLFN11Q7Z7L1 901 aa13.16□□□□□ -0.3
CLN8-212ENST00000637083 RFFLQ8WZ73 363 aa13.16□□□□□ -0.3
CLN8-212ENST00000637083 MS4A14Q96JA4 679 aa13.16□□□□□ -0.3
CLN8-212ENST00000637083 RUFY1Q96T51 708 aa13.16□□□□□ -0.3
CLN8-212ENST00000637083 MOV10L1Q9BXT6 1211 aaKnown RBP13.16□□□□□ -0.3
CLN8-212ENST00000637083 GDF3Q9NR23 364 aa13.16□□□□□ -0.3
CLN8-212ENST00000637083 HACL1Q9UJ83 578 aa13.16□□□□□ -0.3
CLN8-212ENST00000637083 AMFRQ9UKV5 643 aa13.16□□□□□ -0.3
CLN8-212ENST00000637083 NCANO14594 1321 aa13.15□□□□□ -0.3
CLN8-212ENST00000637083 TESPA1A2RU30 521 aaPredicted RBP13.15□□□□□ -0.3
CLN8-212ENST00000637083 TMCO5BA8MYB1 307 aa13.15□□□□□ -0.3
CLN8-212ENST00000637083 PGRMC1O00264 195 aaKnown RBP13.15□□□□□ -0.3
CLN8-212ENST00000637083 RNF40O75150 1001 aa13.15□□□□□ -0.3
CLN8-212ENST00000637083 LMAN1P49257 510 aa13.15□□□□□ -0.3
CLN8-212ENST00000637083 GMPSP49915 693 aaPredicted RBP13.15□□□□□ -0.3
CLN8-212ENST00000637083 GALCP54803 685 aa13.15□□□□□ -0.3
CLN8-212ENST00000637083 KIF22Q14807 665 aa13.15□□□□□ -0.3
CLN8-212ENST00000637083 LEKR1Q6ZMV7 388 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms