RNA–Protein interactions for RNA: ENST00000636759.1

SCN1A-213, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

TSL 5

Gene SCN1A, Length 3,606 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-213ENST00000636759 LRRC8BQ6P9F7 803 aa7.35□□□□□ -1.23
SCN1A-213ENST00000636759 LRRC74BQ6ZQY2 392 aa7.35□□□□□ -1.23
SCN1A-213ENST00000636759 SPATA31D4Q6ZUB0 917 aa7.35□□□□□ -1.23
SCN1A-213ENST00000636759 CYB5R4Q7L1T6 521 aa7.35□□□□□ -1.23
SCN1A-213ENST00000636759 PALB2Q86YC2 1186 aa7.35□□□□□ -1.23
SCN1A-213ENST00000636759 TMCO5AQ8N6Q1 288 aa7.35□□□□□ -1.23
SCN1A-213ENST00000636759 ANKRD13CQ8N6S4 541 aa7.35□□□□□ -1.23
SCN1A-213ENST00000636759 TTC8Q8TAM2 541 aa7.35□□□□□ -1.23
SCN1A-213ENST00000636759 SPATA20Q8TB22 786 aa7.35□□□□□ -1.23
SCN1A-213ENST00000636759 ZNF184Q99676 751 aaPredicted RBP7.35□□□□□ -1.23
SCN1A-213ENST00000636759 SEC31BQ9NQW1 1179 aa7.35□□□□□ -1.23
SCN1A-213ENST00000636759 PPP1R9AQ9ULJ8 1098 aa7.35□□□□□ -1.23
SCN1A-213ENST00000636759 RPL26L1Q9UNX3 145 aaKnown RBP7.35□□□□□ -1.23
SCN1A-213ENST00000636759 SPATA31A5Q5VU36 1347 aa7.35□□□□□ -1.23
SCN1A-213ENST00000636759 SPATA31A7Q8IWB4 1347 aa7.35□□□□□ -1.23
SCN1A-213ENST00000636759 SMIM31A0A1B0GVY4 71 aa7.35□□□□□ -1.23
SCN1A-213ENST00000636759 A0A1W2PQC6 194 aa7.35□□□□□ -1.23
SCN1A-213ENST00000636759 A6NJR5 290 aa7.35□□□□□ -1.23
SCN1A-213ENST00000636759 ERVV-1B6SEH8 477 aa7.35□□□□□ -1.23
SCN1A-213ENST00000636759 CAPN9O14815 690 aa7.35□□□□□ -1.23
SCN1A-213ENST00000636759 WDR46O15213 610 aaKnown RBP7.35□□□□□ -1.23
SCN1A-213ENST00000636759 BUB1O43683 1085 aa7.35□□□□□ -1.23
SCN1A-213ENST00000636759 ADCY3O60266 1144 aa7.35□□□□□ -1.23
SCN1A-213ENST00000636759 STARD3NLO95772 234 aa7.35□□□□□ -1.23
SCN1A-213ENST00000636759 FGAP02671 866 aa7.35□□□□□ -1.23
SCN1A-213ENST00000636759 MMP13P45452 471 aa7.35□□□□□ -1.23
SCN1A-213ENST00000636759 MEA1Q16626 185 aa7.35□□□□□ -1.23
SCN1A-213ENST00000636759 ZC2HC1CQ53FD0 456 aaPredicted RBP7.35□□□□□ -1.23
SCN1A-213ENST00000636759 HSP90AA5PQ58FG0 334 aa7.35□□□□□ -1.23
SCN1A-213ENST00000636759 TYW1BQ6NUM6 668 aa7.35□□□□□ -1.23
SCN1A-213ENST00000636759 BARGINQ6ZT62 677 aa7.35□□□□□ -1.23
SCN1A-213ENST00000636759 DDX42Q86XP3 938 aaKnown RBP eCLIP7.35□□□□□ -1.23
SCN1A-213ENST00000636759 TBC1D10CQ8IV04 446 aa7.35□□□□□ -1.23
SCN1A-213ENST00000636759 CYP4X1Q8N118 509 aa7.35□□□□□ -1.23
SCN1A-213ENST00000636759 HELBQ8NG08 1087 aaPredicted RBP7.35□□□□□ -1.23
SCN1A-213ENST00000636759 TLR10Q9BXR5 811 aa7.35□□□□□ -1.23
SCN1A-213ENST00000636759 LRMDAQ9H2I8 198 aa7.35□□□□□ -1.23
SCN1A-213ENST00000636759 INIPQ9NRY2 104 aa7.35□□□□□ -1.23
SCN1A-213ENST00000636759 PTTG2Q9NZH5 202 aa7.35□□□□□ -1.23
SCN1A-213ENST00000636759 FBXO9Q9UK97 447 aaPredicted RBP7.35□□□□□ -1.23
SCN1A-213ENST00000636759 SPO11Q9Y5K1 396 aa7.35□□□□□ -1.23
SCN1A-213ENST00000636759 FADS3Q9Y5Q0 445 aa7.35□□□□□ -1.23
SCN1A-213ENST00000636759 COL24A1Q17RW2 1714 aa7.34□□□□□ -1.23
SCN1A-213ENST00000636759 LGALS16A8MUM7 142 aa7.34□□□□□ -1.23
SCN1A-213ENST00000636759 UBE2Q2LH0YL09 131 aa7.34□□□□□ -1.23
SCN1A-213ENST00000636759 LCA5LO95447 670 aa7.34□□□□□ -1.23
SCN1A-213ENST00000636759 POTEIP0CG38 1075 aa7.34□□□□□ -1.23
SCN1A-213ENST00000636759 DNM2P50570 870 aa7.34□□□□□ -1.23
SCN1A-213ENST00000636759 HLFQ16534 295 aa7.34□□□□□ -1.23
SCN1A-213ENST00000636759 SMUG1Q53HV7 270 aa7.34□□□□□ -1.23
SCN1A-213ENST00000636759 SLC2A7Q6PXP3 512 aa7.34□□□□□ -1.23
SCN1A-213ENST00000636759 SCAIQ8N9R8 606 aa7.34□□□□□ -1.23
SCN1A-213ENST00000636759 USP33Q8TEY7 942 aa7.34□□□□□ -1.23
SCN1A-213ENST00000636759 IRGQQ8WZA9 623 aa7.34□□□□□ -1.23
SCN1A-213ENST00000636759 DNAJC1Q96KC8 554 aaKnown RBP7.34□□□□□ -1.23
SCN1A-213ENST00000636759 CCT7Q99832 543 aa7.34□□□□□ -1.23
SCN1A-213ENST00000636759 CLIC5Q9NZA1 410 aa7.34□□□□□ -1.23
SCN1A-213ENST00000636759 TDRKHQ9Y2W6 561 aaKnown RBP7.34□□□□□ -1.23
SCN1A-213ENST00000636759 NHSQ6T4R5 1651 aa7.34□□□□□ -1.23
SCN1A-213ENST00000636759 MROH7Q68CQ1 1323 aa7.34□□□□□ -1.23
SCN1A-213ENST00000636759 POTEFA5A3E0 1075 aa7.34□□□□□ -1.23
SCN1A-213ENST00000636759 PRPF3O43395 683 aaKnown RBP7.34□□□□□ -1.23
SCN1A-213ENST00000636759 KDM1AO60341 852 aa7.34□□□□□ -1.23
SCN1A-213ENST00000636759 GSTT2P0CG29 244 aa7.34□□□□□ -1.23
SCN1A-213ENST00000636759 GSTT2BP0CG30 244 aa7.34□□□□□ -1.23
SCN1A-213ENST00000636759 MARK3P27448 753 aa7.34□□□□□ -1.23
SCN1A-213ENST00000636759 TOB1P50616 345 aaPredicted RBP7.34□□□□□ -1.23
SCN1A-213ENST00000636759 KIF22Q14807 665 aa7.34□□□□□ -1.23
SCN1A-213ENST00000636759 PDCD4Q53EL6 469 aaKnown RBP7.34□□□□□ -1.23
SCN1A-213ENST00000636759 ZNF449Q6P9G9 518 aa7.34□□□□□ -1.23
SCN1A-213ENST00000636759 RALYLQ86SE5 291 aaKnown RBP7.34□□□□□ -1.23
SCN1A-213ENST00000636759 PHLDB2Q86SQ0 1253 aa7.34□□□□□ -1.23
SCN1A-213ENST00000636759 PATL1Q86TB9 770 aaKnown RBP7.34□□□□□ -1.23
SCN1A-213ENST00000636759 NLRP10Q86W26 655 aa7.34□□□□□ -1.23
SCN1A-213ENST00000636759 IGDCC4Q8TDY8 1250 aa7.34□□□□□ -1.23
SCN1A-213ENST00000636759 RNF25Q96BH1 459 aaPredicted RBP7.34□□□□□ -1.23
SCN1A-213ENST00000636759 AIFM3Q96NN9 605 aa7.34□□□□□ -1.23
SCN1A-213ENST00000636759 BHMT2Q9H2M3 363 aa7.34□□□□□ -1.23
SCN1A-213ENST00000636759 CCDC134Q9H6E4 229 aa7.34□□□□□ -1.23
SCN1A-213ENST00000636759 METTL5Q9NRN9 209 aaKnown RBP7.34□□□□□ -1.23
SCN1A-213ENST00000636759 HSFX1Q9UBD0 423 aa7.34□□□□□ -1.23
SCN1A-213ENST00000636759 SAP30BPQ9UHR5 308 aaKnown RBP7.34□□□□□ -1.23
SCN1A-213ENST00000636759 RWDD2AQ9UIY3 292 aa7.34□□□□□ -1.23
SCN1A-213ENST00000636759 N6AMT1Q9Y5N5 214 aa7.34□□□□□ -1.23
SCN1A-213ENST00000636759 LY75O60449 1722 aa7.34□□□□□ -1.23
SCN1A-213ENST00000636759 ATAD5Q96QE3 1844 aa7.34□□□□□ -1.23
SCN1A-213ENST00000636759 TBC1D12O60347 775 aa7.34□□□□□ -1.23
SCN1A-213ENST00000636759 AGTP01019 485 aa7.34□□□□□ -1.23
SCN1A-213ENST00000636759 AFPP02771 609 aaKnown RBP7.34□□□□□ -1.23
SCN1A-213ENST00000636759 PDGFRBP09619 1106 aa7.34□□□□□ -1.23
SCN1A-213ENST00000636759 PTPREP23469 700 aa7.34□□□□□ -1.23
SCN1A-213ENST00000636759 FLT3P36888 993 aa7.34□□□□□ -1.23
SCN1A-213ENST00000636759 IL6STP40189 918 aaPredicted RBP7.34□□□□□ -1.23
SCN1A-213ENST00000636759 SLC34A1Q06495 639 aa7.34□□□□□ -1.23
SCN1A-213ENST00000636759 ITGA9Q13797 1035 aa7.34□□□□□ -1.23
SCN1A-213ENST00000636759 C6orf118Q5T5N4 469 aa7.34□□□□□ -1.23
SCN1A-213ENST00000636759 ZNF34Q8IZ26 560 aa7.34□□□□□ -1.23
SCN1A-213ENST00000636759 PRPF31Q8WWY3 499 aaKnown RBP7.34□□□□□ -1.23
SCN1A-213ENST00000636759 INPP5DQ92835 1189 aa7.34□□□□□ -1.23
SCN1A-213ENST00000636759 ERP27Q96DN0 273 aa7.34□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms