RNA–Protein interactions for RNA: ENST00000636238.1

CIITA-214, Transcript of class II major histocompatibility complex transactivator, humanhuman

TSL 5

Gene CIITA, Length 498 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-214ENST00000636238 GPR161Q8N6U8 529 aaKnown RBP8.35□□□□□ -1.07
CIITA-214ENST00000636238 DTWD2Q8NBA8 298 aa8.35□□□□□ -1.07
CIITA-214ENST00000636238 CTCFLQ8NI51 663 aaPredicted RBP8.35□□□□□ -1.07
CIITA-214ENST00000636238 NXPE3Q969Y0 559 aa8.35□□□□□ -1.07
CIITA-214ENST00000636238 PCYT2Q99447 389 aa8.35□□□□□ -1.07
CIITA-214ENST00000636238 POMKQ9H5K3 350 aa8.35□□□□□ -1.07
CIITA-214ENST00000636238 PSTPIP2Q9H939 334 aa8.35□□□□□ -1.07
CIITA-214ENST00000636238 GJB4Q9NTQ9 266 aa8.35□□□□□ -1.07
CIITA-214ENST00000636238 IGSF9Q9P2J2 1179 aa8.35□□□□□ -1.07
CIITA-214ENST00000636238 DUSP12Q9UNI6 340 aa8.35□□□□□ -1.07
CIITA-214ENST00000636238 ST3GAL5Q9UNP4 418 aa8.35□□□□□ -1.07
CIITA-214ENST00000636238 NID2Q14112 1375 aa8.35□□□□□ -1.07
CIITA-214ENST00000636238 HIDE1A8MVS5 230 aa8.34□□□□□ -1.07
CIITA-214ENST00000636238 CDKL5O76039 1030 aa8.34□□□□□ -1.07
CIITA-214ENST00000636238 FOSP01100 380 aaPredicted RBP8.34□□□□□ -1.07
CIITA-214ENST00000636238 CALM1P0DP23 149 aa8.34□□□□□ -1.07
CIITA-214ENST00000636238 CALM2P0DP24 149 aa8.34□□□□□ -1.07
CIITA-214ENST00000636238 CALM3P0DP25 149 aa8.34□□□□□ -1.07
CIITA-214ENST00000636238 IFNAR1P17181 557 aa8.34□□□□□ -1.07
CIITA-214ENST00000636238 PDCP20941 246 aa8.34□□□□□ -1.07
CIITA-214ENST00000636238 GATMP50440 423 aa8.34□□□□□ -1.07
CIITA-214ENST00000636238 ACTR2P61160 394 aa8.34□□□□□ -1.07
CIITA-214ENST00000636238 CDC42EP1Q00587 391 aa8.34□□□□□ -1.07
CIITA-214ENST00000636238 ANGPT1Q15389 498 aa8.34□□□□□ -1.07
CIITA-214ENST00000636238 FAM102BQ5T8I3 360 aa8.34□□□□□ -1.07
CIITA-214ENST00000636238 CWF19L1Q69YN2 538 aaKnown RBP8.34□□□□□ -1.07
CIITA-214ENST00000636238 ELMSAN1Q6PJG2 1045 aa8.34□□□□□ -1.07
CIITA-214ENST00000636238 C15orf39Q6ZRI6 1047 aa8.34□□□□□ -1.07
CIITA-214ENST00000636238 SLC39A11Q8N1S5 342 aa8.34□□□□□ -1.07
CIITA-214ENST00000636238 CMASQ8NFW8 434 aaPredicted RBP8.34□□□□□ -1.07
CIITA-214ENST00000636238 PIBF1Q8WXW3 757 aa8.34□□□□□ -1.07
CIITA-214ENST00000636238 ZFP91Q96JP5 570 aaPredicted RBP8.34□□□□□ -1.07
CIITA-214ENST00000636238 CASD1Q96PB1 797 aa8.34□□□□□ -1.07
CIITA-214ENST00000636238 GBP4Q96PP9 640 aa8.34□□□□□ -1.07
CIITA-214ENST00000636238 MXRA8Q9BRK3 442 aa8.34□□□□□ -1.07
CIITA-214ENST00000636238 TRAIPQ9BWF2 469 aa8.34□□□□□ -1.07
CIITA-214ENST00000636238 GLT8D2Q9H1C3 349 aa8.34□□□□□ -1.07
CIITA-214ENST00000636238 KCNH7Q9NS40 1196 aa8.34□□□□□ -1.07
CIITA-214ENST00000636238 DLL3Q9NYJ7 618 aa8.34□□□□□ -1.07
CIITA-214ENST00000636238 WNT16Q9UBV4 365 aa8.34□□□□□ -1.07
CIITA-214ENST00000636238 DPP7Q9UHL4 492 aa8.34□□□□□ -1.07
CIITA-214ENST00000636238 CEP131Q9UPN4 1083 aa8.34□□□□□ -1.07
CIITA-214ENST00000636238 NOC2LQ9Y3T9 749 aaKnown RBP8.34□□□□□ -1.07
CIITA-214ENST00000636238 TELO2Q9Y4R8 837 aa8.34□□□□□ -1.07
CIITA-214ENST00000636238 CCDC196A0A1B0GTZ2 297 aa8.33□□□□□ -1.08
CIITA-214ENST00000636238 MAGEB2O15479 319 aa8.33□□□□□ -1.08
CIITA-214ENST00000636238 MGEA5O60502 916 aa8.33□□□□□ -1.08
CIITA-214ENST00000636238 CLASP2O75122 1294 aaKnown RBP8.33□□□□□ -1.08
CIITA-214ENST00000636238 ZSCAN20P17040 1043 aaPredicted RBP8.33□□□□□ -1.08
CIITA-214ENST00000636238 KLRC1P26715 233 aa8.33□□□□□ -1.08
CIITA-214ENST00000636238 ALDH7A1P49419 539 aaKnown RBP8.33□□□□□ -1.08
CIITA-214ENST00000636238 RCAN1P53805 252 aa8.33□□□□□ -1.08
CIITA-214ENST00000636238 RBM10P98175 930 aaKnown RBP8.33□□□□□ -1.08
CIITA-214ENST00000636238 PPP1R18Q6NYC8 613 aa8.33□□□□□ -1.08
CIITA-214ENST00000636238 FAM173BQ6P4H8 233 aa8.33□□□□□ -1.08
CIITA-214ENST00000636238 CCDC149Q6ZUS6 474 aa8.33□□□□□ -1.08
CIITA-214ENST00000636238 TMTC3Q6ZXV5 915 aa8.33□□□□□ -1.08
CIITA-214ENST00000636238 SRBD1Q8N5C6 995 aaKnown RBP8.33□□□□□ -1.08
CIITA-214ENST00000636238 TMEM87AQ8NBN3 555 aa8.33□□□□□ -1.08
CIITA-214ENST00000636238 STAMQ92783 540 aa8.33□□□□□ -1.08
CIITA-214ENST00000636238 TMEM169Q96HH4 297 aa8.33□□□□□ -1.08
CIITA-214ENST00000636238 C8orf76Q96K31 380 aa8.33□□□□□ -1.08
CIITA-214ENST00000636238 SFXN1Q9H9B4 322 aa8.33□□□□□ -1.08
CIITA-214ENST00000636238 RBM28Q9NW13 759 aaKnown RBP8.33□□□□□ -1.08
CIITA-214ENST00000636238 DACT1Q9NYF0 836 aa8.33□□□□□ -1.08
CIITA-214ENST00000636238 LIMD1Q9UGP4 676 aa8.33□□□□□ -1.08
CIITA-214ENST00000636238 DBR1Q9UK59 544 aaKnown RBP8.33□□□□□ -1.08
CIITA-214ENST00000636238 KIF3AQ9Y496 699 aa8.33□□□□□ -1.08
CIITA-214ENST00000636238 V9GY48 417 aaPredicted RBP8.33□□□□□ -1.08
CIITA-214ENST00000636238 STK36Q9NRP7 1315 aa8.32□□□□□ -1.08
CIITA-214ENST00000636238 PLXNA3P51805 1871 aa8.32□□□□□ -1.08
CIITA-214ENST00000636238 DMDP11532 3685 aa8.32□□□□□ -1.08
CIITA-214ENST00000636238 A0A0U1RQF3 1178 aa8.32□□□□□ -1.08
CIITA-214ENST00000636238 hCG_1984214I3L0E3 225 aa8.32□□□□□ -1.08
CIITA-214ENST00000636238 PAPLNO95428 1278 aa8.32□□□□□ -1.08
CIITA-214ENST00000636238 CTSAP10619 480 aa8.32□□□□□ -1.08
CIITA-214ENST00000636238 SKIP12755 728 aa8.32□□□□□ -1.08
CIITA-214ENST00000636238 NPR3P17342 541 aa8.32□□□□□ -1.08
CIITA-214ENST00000636238 TMOD1P28289 359 aa8.32□□□□□ -1.08
CIITA-214ENST00000636238 TBC1D8BQ0IIM8 1120 aa8.32□□□□□ -1.08
CIITA-214ENST00000636238 TMEM62Q0P6H9 643 aa8.32□□□□□ -1.08
CIITA-214ENST00000636238 FUT2Q10981 343 aa8.32□□□□□ -1.08
CIITA-214ENST00000636238 RESTQ13127 1097 aa8.32□□□□□ -1.08
CIITA-214ENST00000636238 AP3B2Q13367 1082 aa8.32□□□□□ -1.08
CIITA-214ENST00000636238 TMEM266Q2M3C6 531 aa8.32□□□□□ -1.08
CIITA-214ENST00000636238 CEP55Q53EZ4 464 aa8.32□□□□□ -1.08
CIITA-214ENST00000636238 PHLDB3Q6NSJ2 640 aa8.32□□□□□ -1.08
CIITA-214ENST00000636238 MIS18BP1Q6P0N0 1132 aa8.32□□□□□ -1.08
CIITA-214ENST00000636238 LLGL2Q6P1M3 1020 aa8.32□□□□□ -1.08
CIITA-214ENST00000636238 ABHD15Q6UXT9 468 aa8.32□□□□□ -1.08
CIITA-214ENST00000636238 CLEC17AQ6ZS10 378 aa8.32□□□□□ -1.08
CIITA-214ENST00000636238 GPR149Q86SP6 731 aa8.32□□□□□ -1.08
CIITA-214ENST00000636238 DDX53Q86TM3 631 aaKnown RBP8.32□□□□□ -1.08
CIITA-214ENST00000636238 FAM228AQ86W67 206 aa8.32□□□□□ -1.08
CIITA-214ENST00000636238 TRIM22Q8IYM9 498 aa8.32□□□□□ -1.08
CIITA-214ENST00000636238 ZNF713Q8N859 430 aaPredicted RBP8.32□□□□□ -1.08
CIITA-214ENST00000636238 TMEM40Q8WWA1 233 aa8.32□□□□□ -1.08
CIITA-214ENST00000636238 BBXQ8WY36 941 aaPredicted RBP8.32□□□□□ -1.08
CIITA-214ENST00000636238 RUBCNQ92622 972 aa8.32□□□□□ -1.08
CIITA-214ENST00000636238 RMDN1Q96DB5 314 aa8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms