RNA–Protein interactions for RNA: ENST00000636183.1

CLN5-208, Transcript of CLN5, intracellular trafficking protein, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CLN5, Length 6,664 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5-208ENST00000636183 TBC1D22BQ9NU19 505 aa17.17■□□□□ 0.34
CLN5-208ENST00000636183 STAP1Q9ULZ2 295 aa17.17■□□□□ 0.34
CLN5-208ENST00000636183 ZBTB12Q9Y330 459 aaPredicted RBP17.17■□□□□ 0.34
CLN5-208ENST00000636183 MAP4P27816 1152 aaKnown RBP17.17■□□□□ 0.34
CLN5-208ENST00000636183 TRIM42Q8IWZ5 723 aa17.17■□□□□ 0.34
CLN5-208ENST00000636183 YME1L1Q96TA2 773 aa17.17■□□□□ 0.34
CLN5-208ENST00000636183 MINPP1Q9UNW1 487 aa17.17■□□□□ 0.34
CLN5-208ENST00000636183 GOLGA8MH3BSY2 632 aa17.17■□□□□ 0.34
CLN5-208ENST00000636183 SPTLC1O15269 473 aa17.17■□□□□ 0.34
CLN5-208ENST00000636183 TRPA1O75762 1119 aa17.17■□□□□ 0.34
CLN5-208ENST00000636183 HSPA4LO95757 839 aa17.17■□□□□ 0.34
CLN5-208ENST00000636183 WHAMMP3Q1A5X7 153 aa17.17■□□□□ 0.34
CLN5-208ENST00000636183 SCYL3Q8IZE3 742 aa17.17■□□□□ 0.34
CLN5-208ENST00000636183 MYO1DO94832 1006 aa17.17■□□□□ 0.34
CLN5-208ENST00000636183 LIG3P49916 1009 aa17.17■□□□□ 0.34
CLN5-208ENST00000636183 RNF180Q86T96 592 aa17.17■□□□□ 0.34
CLN5-208ENST00000636183 ADAM22Q9P0K1 906 aa17.17■□□□□ 0.34
CLN5-208ENST00000636183 SNAP23O00161 211 aa17.16■□□□□ 0.34
CLN5-208ENST00000636183 EFHC2Q5JST6 749 aa17.16■□□□□ 0.34
CLN5-208ENST00000636183 SLC44A5Q8NCS7 719 aa17.16■□□□□ 0.34
CLN5-208ENST00000636183 MAML1Q92585 1016 aa17.16■□□□□ 0.34
CLN5-208ENST00000636183 SPZ1Q9BXG8 430 aa17.16■□□□□ 0.34
CLN5-208ENST00000636183 GTPBP10A4D1E9 387 aaKnown RBP17.16■□□□□ 0.34
CLN5-208ENST00000636183 APOA4P06727 396 aa17.16■□□□□ 0.34
CLN5-208ENST00000636183 OAS2P29728 719 aaKnown RBP17.16■□□□□ 0.34
CLN5-208ENST00000636183 PPP3CCP48454 512 aa17.16■□□□□ 0.34
CLN5-208ENST00000636183 KRT76Q01546 638 aa17.16■□□□□ 0.34
CLN5-208ENST00000636183 ZNF658Q5TYW1 1059 aaPredicted RBP17.16■□□□□ 0.34
CLN5-208ENST00000636183 POTEDQ86YR6 584 aa17.16■□□□□ 0.34
CLN5-208ENST00000636183 CEP19Q96LK0 163 aa17.16■□□□□ 0.34
CLN5-208ENST00000636183 PCDHB8Q9UN66 801 aa17.16■□□□□ 0.34
CLN5-208ENST00000636183 ARHGAP25P42331 645 aa17.16■□□□□ 0.34
CLN5-208ENST00000636183 GCLMP48507 274 aa17.16■□□□□ 0.34
CLN5-208ENST00000636183 IER5Q5VY09 327 aa17.16■□□□□ 0.34
CLN5-208ENST00000636183 ZNF589Q86UQ0 364 aaPredicted RBP17.16■□□□□ 0.34
CLN5-208ENST00000636183 ATG3Q9NT62 314 aa17.16■□□□□ 0.34
CLN5-208ENST00000636183 PPP2R2CQ9Y2T4 447 aa17.16■□□□□ 0.34
CLN5-208ENST00000636183 E2F6O75461 281 aa17.16■□□□□ 0.34
CLN5-208ENST00000636183 ALDH1A3P47895 512 aa17.16■□□□□ 0.34
CLN5-208ENST00000636183 CHMP1BQ7LBR1 199 aa17.16■□□□□ 0.34
CLN5-208ENST00000636183 TTC8Q8TAM2 541 aa17.16■□□□□ 0.34
CLN5-208ENST00000636183 GNL3Q9BVP2 549 aaKnown RBP eCLIP17.16■□□□□ 0.34
CLN5-208ENST00000636183 ZNRF3Q9ULT6 936 aa17.16■□□□□ 0.34
CLN5-208ENST00000636183 A6NNZ2 444 aa17.16■□□□□ 0.34
CLN5-208ENST00000636183 TUBB8Q3ZCM7 444 aa17.16■□□□□ 0.34
CLN5-208ENST00000636183 GNASQ5JWF2 1037 aa17.16■□□□□ 0.34
CLN5-208ENST00000636183 KCTD16Q68DU8 428 aa17.16■□□□□ 0.34
CLN5-208ENST00000636183 CLEC4GQ6UXB4 293 aa17.16■□□□□ 0.34
CLN5-208ENST00000636183 RNF149Q8NC42 400 aa17.16■□□□□ 0.34
CLN5-208ENST00000636183 NUDT12Q9BQG2 462 aa17.16■□□□□ 0.34
CLN5-208ENST00000636183 TM6SF1Q9BZW5 370 aa17.16■□□□□ 0.34
CLN5-208ENST00000636183 OOSP2Q86WS3 158 aa17.15■□□□□ 0.34
CLN5-208ENST00000636183 HEMGNQ9BXL5 484 aa17.15■□□□□ 0.34
CLN5-208ENST00000636183 IL31Q6EBC2 164 aa17.15■□□□□ 0.34
CLN5-208ENST00000636183 MFN1Q8IWA4 741 aa17.15■□□□□ 0.34
CLN5-208ENST00000636183 SCG3Q8WXD2 468 aaKnown RBP17.15■□□□□ 0.34
CLN5-208ENST00000636183 NFKBIL1Q9UBC1 381 aaPredicted RBP17.15■□□□□ 0.34
CLN5-208ENST00000636183 SLC25A13Q9UJS0 675 aa17.15■□□□□ 0.34
CLN5-208ENST00000636183 MAFGO15525 162 aa17.15■□□□□ 0.34
CLN5-208ENST00000636183 SAAL1Q96ER3 474 aa17.15■□□□□ 0.34
CLN5-208ENST00000636183 ZSWIM6Q9HCJ5 1215 aa17.15■□□□□ 0.34
CLN5-208ENST00000636183 SCINQ9Y6U3 715 aa17.15■□□□□ 0.34
CLN5-208ENST00000636183 SDC4P31431 198 aa17.15■□□□□ 0.34
CLN5-208ENST00000636183 DPYDQ12882 1025 aa17.15■□□□□ 0.34
CLN5-208ENST00000636183 ARHGEF7Q14155 803 aa17.15■□□□□ 0.34
CLN5-208ENST00000636183 IRAK1BP1Q5VVH5 260 aa17.15■□□□□ 0.34
CLN5-208ENST00000636183 CELF1Q92879 486 aaKnown RBP17.15■□□□□ 0.34
CLN5-208ENST00000636183 POLR3CQ9BUI4 534 aaPredicted RBP17.15■□□□□ 0.34
CLN5-208ENST00000636183 AAASQ9NRG9 546 aa17.15■□□□□ 0.34
CLN5-208ENST00000636183 MYOM2P54296 1465 aa17.15■□□□□ 0.34
CLN5-208ENST00000636183 NLRP1Q9C000 1473 aa17.15■□□□□ 0.34
CLN5-208ENST00000636183 AP3B2Q13367 1082 aa17.15■□□□□ 0.34
CLN5-208ENST00000636183 ERLEC1Q96DZ1 483 aa17.15■□□□□ 0.34
CLN5-208ENST00000636183 RRAGCQ9HB90 399 aa17.15■□□□□ 0.34
CLN5-208ENST00000636183 EXOC1LA0A1B0GW35 172 aa17.14■□□□□ 0.33
CLN5-208ENST00000636183 DCDC2CA8MYV0 355 aa17.14■□□□□ 0.33
CLN5-208ENST00000636183 DEFB128Q7Z7B8 93 aa17.14■□□□□ 0.33
CLN5-208ENST00000636183 RASSF3Q86WH2 238 aa17.14■□□□□ 0.33
CLN5-208ENST00000636183 ZNF507Q8TCN5 953 aa17.14■□□□□ 0.33
CLN5-208ENST00000636183 TRIM62Q9BVG3 475 aa17.14■□□□□ 0.33
CLN5-208ENST00000636183 DHX35Q9H5Z1 703 aaKnown RBP17.14■□□□□ 0.33
CLN5-208ENST00000636183 SCUBE2Q9NQ36 999 aa17.14■□□□□ 0.33
CLN5-208ENST00000636183 INTS9Q9NV88 658 aaKnown RBP17.14■□□□□ 0.33
CLN5-208ENST00000636183 ZNF197O14709 1029 aa17.14■□□□□ 0.33
CLN5-208ENST00000636183 MMP1P03956 469 aa17.14■□□□□ 0.33
CLN5-208ENST00000636183 GSPT1P15170 499 aaKnown RBP17.14■□□□□ 0.33
CLN5-208ENST00000636183 PKN3Q6P5Z2 889 aa17.14■□□□□ 0.33
CLN5-208ENST00000636183 RAPGEF5Q92565 580 aa17.14■□□□□ 0.33
CLN5-208ENST00000636183 TMEM260Q9NX78 707 aa17.14■□□□□ 0.33
CLN5-208ENST00000636183 ANAPC7Q9UJX3 599 aa17.14■□□□□ 0.33
CLN5-208ENST00000636183 PHLPP2Q6ZVD8 1323 aa17.14■□□□□ 0.33
CLN5-208ENST00000636183 ALDH1A2O94788 518 aa17.14■□□□□ 0.33
CLN5-208ENST00000636183 TJP3O95049 919 aa17.14■□□□□ 0.33
CLN5-208ENST00000636183 HS6ST3Q8IZP7 471 aa17.14■□□□□ 0.33
CLN5-208ENST00000636183 ZNF560Q96MR9 790 aa17.14■□□□□ 0.33
CLN5-208ENST00000636183 EFHD1Q9BUP0 239 aa17.14■□□□□ 0.33
CLN5-208ENST00000636183 VPS11Q9H270 941 aa17.14■□□□□ 0.33
CLN5-208ENST00000636183 SLC9A2Q9UBY0 812 aa17.14■□□□□ 0.33
CLN5-208ENST00000636183 L3MBTL1Q9Y468 752 aa17.14■□□□□ 0.33
CLN5-208ENST00000636183 TTLL13PA6NNM8 815 aa17.14■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms