RNA–Protein interactions for RNA: ENST00000635988.1

CACNA1A-220, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 2,548 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-220ENST00000635988 SMIM23A6NLE4 172 aa15.99■□□□□ 0.15
CACNA1A-220ENST00000635988 O00370 1275 aa15.99■□□□□ 0.15
CACNA1A-220ENST00000635988 ZBTB5O15062 677 aa15.99■□□□□ 0.15
CACNA1A-220ENST00000635988 NEBLO76041 1014 aa15.99■□□□□ 0.15
CACNA1A-220ENST00000635988 OAS1P00973 400 aaKnown RBP15.99■□□□□ 0.15
CACNA1A-220ENST00000635988 ZKSCAN8Q15776 578 aaPredicted RBP15.99■□□□□ 0.15
CACNA1A-220ENST00000635988 GPATCH4Q5T3I0 446 aaKnown RBP15.99■□□□□ 0.15
CACNA1A-220ENST00000635988 NBPF5PQ86XG9 351 aaPredicted RBP15.99■□□□□ 0.15
CACNA1A-220ENST00000635988 ACSBG1Q96GR2 724 aa15.99■□□□□ 0.15
CACNA1A-220ENST00000635988 MBOAT7Q96N66 472 aa15.99■□□□□ 0.15
CACNA1A-220ENST00000635988 SETDB2Q96T68 719 aa15.99■□□□□ 0.15
CACNA1A-220ENST00000635988 SYT11Q9BT88 431 aa15.99■□□□□ 0.15
CACNA1A-220ENST00000635988 SEMA4AQ9H3S1 761 aa15.99■□□□□ 0.15
CACNA1A-220ENST00000635988 ASTN1O14525 1302 aa15.99■□□□□ 0.15
CACNA1A-220ENST00000635988 POTEFA5A3E0 1075 aa15.99■□□□□ 0.15
CACNA1A-220ENST00000635988 PPP1R12AO14974 1030 aaPredicted RBP15.99■□□□□ 0.15
CACNA1A-220ENST00000635988 RIPK2O43353 540 aa15.99■□□□□ 0.15
CACNA1A-220ENST00000635988 POTEIP0CG38 1075 aa15.99■□□□□ 0.15
CACNA1A-220ENST00000635988 TNFAIP3P21580 790 aa15.99■□□□□ 0.15
CACNA1A-220ENST00000635988 RPA1P27694 616 aa15.99■□□□□ 0.15
CACNA1A-220ENST00000635988 ATP5DP30049 168 aa15.99■□□□□ 0.15
CACNA1A-220ENST00000635988 PSMC2P35998 433 aaKnown RBP15.99■□□□□ 0.15
CACNA1A-220ENST00000635988 GRIK5Q16478 980 aa15.99■□□□□ 0.15
CACNA1A-220ENST00000635988 GALNTL6Q49A17 601 aa15.99■□□□□ 0.15
CACNA1A-220ENST00000635988 GJB7Q6PEY0 223 aa15.99■□□□□ 0.15
CACNA1A-220ENST00000635988 POTEGQ6S5H5 508 aa15.99■□□□□ 0.15
CACNA1A-220ENST00000635988 POTEEQ6S8J3 1075 aa15.99■□□□□ 0.15
CACNA1A-220ENST00000635988 OLIG1Q8TAK6 271 aa15.99■□□□□ 0.15
CACNA1A-220ENST00000635988 DYDC1Q8WWB3 177 aa15.99■□□□□ 0.15
CACNA1A-220ENST00000635988 ABCF3Q9NUQ8 709 aa15.99■□□□□ 0.15
CACNA1A-220ENST00000635988 PFASO15067 1338 aa15.99■□□□□ 0.15
CACNA1A-220ENST00000635988 PPP1R11O60927 126 aaPredicted RBP15.98■□□□□ 0.15
CACNA1A-220ENST00000635988 UBOX5O94941 541 aa15.98■□□□□ 0.15
CACNA1A-220ENST00000635988 RARAP10276 462 aa15.98■□□□□ 0.15
CACNA1A-220ENST00000635988 ABCB4P21439 1286 aa15.98■□□□□ 0.15
CACNA1A-220ENST00000635988 PAX7P23759 505 aa15.98■□□□□ 0.15
CACNA1A-220ENST00000635988 NCALDP61601 193 aa15.98■□□□□ 0.15
CACNA1A-220ENST00000635988 SATB1Q01826 763 aa15.98■□□□□ 0.15
CACNA1A-220ENST00000635988 AUHQ13825 339 aaKnown RBP15.98■□□□□ 0.15
CACNA1A-220ENST00000635988 DRAP1Q14919 205 aaPredicted RBP15.98■□□□□ 0.15
CACNA1A-220ENST00000635988 DDB1Q16531 1140 aa15.98■□□□□ 0.15
CACNA1A-220ENST00000635988 NFIL3Q16649 462 aa15.98■□□□□ 0.15
CACNA1A-220ENST00000635988 C11orf63Q6NUN7 778 aa15.98■□□□□ 0.15
CACNA1A-220ENST00000635988 ADAT2Q7Z6V5 191 aaKnown RBP15.98■□□□□ 0.15
CACNA1A-220ENST00000635988 CATSPER3Q86XQ3 398 aa15.98■□□□□ 0.15
CACNA1A-220ENST00000635988 LRRC47Q8N1G4 583 aaKnown RBP15.98■□□□□ 0.15
CACNA1A-220ENST00000635988 MKNK1Q9BUB5 465 aa15.98■□□□□ 0.15
CACNA1A-220ENST00000635988 ECT2Q9H8V3 914 aa15.98■□□□□ 0.15
CACNA1A-220ENST00000635988 DNAJC12Q9UKB3 198 aa15.98■□□□□ 0.15
CACNA1A-220ENST00000635988 TBX3O15119 743 aa15.98■□□□□ 0.15
CACNA1A-220ENST00000635988 TBCAO75347 108 aaKnown RBP15.98■□□□□ 0.15
CACNA1A-220ENST00000635988 CTNNA2P26232 953 aa15.98■□□□□ 0.15
CACNA1A-220ENST00000635988 RPL21P46778 160 aaKnown RBP15.98■□□□□ 0.15
CACNA1A-220ENST00000635988 CASP4P49662 377 aa15.98■□□□□ 0.15
CACNA1A-220ENST00000635988 TCEAL1Q15170 157 aa15.98■□□□□ 0.15
CACNA1A-220ENST00000635988 TPTE2Q6XPS3 522 aa15.98■□□□□ 0.15
CACNA1A-220ENST00000635988 CYFIP1Q7L576 1253 aa15.98■□□□□ 0.15
CACNA1A-220ENST00000635988 KCTD17Q8N5Z5 321 aa15.98■□□□□ 0.15
CACNA1A-220ENST00000635988 AGAP11Q8TF27 550 aa15.98■□□□□ 0.15
CACNA1A-220ENST00000635988 FAM212AQ96EL1 285 aa15.98■□□□□ 0.15
CACNA1A-220ENST00000635988 BORCS6Q96GS4 357 aa15.98■□□□□ 0.15
CACNA1A-220ENST00000635988 AGAP1Q9UPQ3 857 aa15.98■□□□□ 0.15
CACNA1A-220ENST00000635988 PCDHB13Q9Y5F0 798 aa15.98■□□□□ 0.15
CACNA1A-220ENST00000635988 TTLL1O95922 423 aa15.97■□□□□ 0.15
CACNA1A-220ENST00000635988 GAP43P17677 238 aa15.97■□□□□ 0.15
CACNA1A-220ENST00000635988 COPB2P35606 906 aa15.97■□□□□ 0.15
CACNA1A-220ENST00000635988 IFNAR2P48551 515 aa15.97■□□□□ 0.15
CACNA1A-220ENST00000635988 COPS2P61201 443 aa15.97■□□□□ 0.15
CACNA1A-220ENST00000635988 IRX1P78414 480 aaPredicted RBP15.97■□□□□ 0.15
CACNA1A-220ENST00000635988 BNIP1Q12981 228 aa15.97■□□□□ 0.15
CACNA1A-220ENST00000635988 PABPC4Q13310 644 aaKnown RBP eCLIP15.97■□□□□ 0.15
CACNA1A-220ENST00000635988 ZNF211Q13398 564 aaPredicted RBP15.97■□□□□ 0.15
CACNA1A-220ENST00000635988 C15orf52Q6ZUT6 534 aaKnown RBP15.97■□□□□ 0.15
CACNA1A-220ENST00000635988 TRMT10CQ7L0Y3 403 aaKnown RBP15.97■□□□□ 0.15
CACNA1A-220ENST00000635988 FAM186BQ8IYM0 893 aa15.97■□□□□ 0.15
CACNA1A-220ENST00000635988 EPS8L3Q8TE67 593 aaKnown RBP15.97■□□□□ 0.15
CACNA1A-220ENST00000635988 MORC4Q8TE76 937 aa15.97■□□□□ 0.15
CACNA1A-220ENST00000635988 ALG3Q92685 438 aa15.97■□□□□ 0.15
CACNA1A-220ENST00000635988 FAM163AQ96GL9 167 aaPredicted RBP15.97■□□□□ 0.15
CACNA1A-220ENST00000635988 C10orf71Q711Q0 1435 aa15.97■□□□□ 0.15
CACNA1A-220ENST00000635988 IGKV6D-41A0A0C4DH26 115 aa15.97■□□□□ 0.15
CACNA1A-220ENST00000635988 KIF3CO14782 793 aa15.97■□□□□ 0.15
CACNA1A-220ENST00000635988 GCNT3O95395 438 aa15.97■□□□□ 0.15
CACNA1A-220ENST00000635988 RFX1P22670 979 aa15.97■□□□□ 0.15
CACNA1A-220ENST00000635988 MAP2K1Q02750 393 aaPredicted RBP15.97■□□□□ 0.15
CACNA1A-220ENST00000635988 SEL1L2Q5TEA6 688 aa15.97■□□□□ 0.15
CACNA1A-220ENST00000635988 BARGINQ6ZT62 677 aa15.97■□□□□ 0.15
CACNA1A-220ENST00000635988 PRELID2Q8N945 189 aa15.97■□□□□ 0.15
CACNA1A-220ENST00000635988 KLHL29Q96CT2 875 aa15.97■□□□□ 0.15
CACNA1A-220ENST00000635988 C18orf8Q96DM3 657 aa15.97■□□□□ 0.15
CACNA1A-220ENST00000635988 THOC1Q96FV9 657 aaKnown RBP15.97■□□□□ 0.15
CACNA1A-220ENST00000635988 CCDC113Q9H0I3 377 aa15.97■□□□□ 0.15
CACNA1A-220ENST00000635988 OLFML3Q9NRN5 406 aa15.97■□□□□ 0.15
CACNA1A-220ENST00000635988 IGSF9BQ9UPX0 1349 aa15.97■□□□□ 0.15
CACNA1A-220ENST00000635988 ALG6Q9Y672 507 aa15.97■□□□□ 0.15
CACNA1A-220ENST00000635988 FRMPD4Q14CM0 1322 aa15.96■□□□□ 0.15
CACNA1A-220ENST00000635988 EIF3DO15371 548 aaKnown RBP eCLIP15.96■□□□□ 0.15
CACNA1A-220ENST00000635988 ALAS1P13196 640 aa15.96■□□□□ 0.15
CACNA1A-220ENST00000635988 TM4SF1P30408 202 aa15.96■□□□□ 0.15
CACNA1A-220ENST00000635988 RFC4P35249 363 aa15.96■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 67.7 ms