RNA–Protein interactions for RNA: ENST00000634889.1

CDC42BPB-209, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 3

Gene CDC42BPB, Length 507 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-209ENST00000634889 CUTAO60888 179 aa16.36■□□□□ 0.21
CDC42BPB-209ENST00000634889 GJB5O95377 273 aa16.36■□□□□ 0.21
CDC42BPB-209ENST00000634889 SRGAP2CP0DJJ0 459 aa16.36■□□□□ 0.21
CDC42BPB-209ENST00000634889 PLCG1P19174 1290 aa16.36■□□□□ 0.21
CDC42BPB-209ENST00000634889 GLRA2P23416 452 aa16.36■□□□□ 0.21
CDC42BPB-209ENST00000634889 DNAJB2P25686 324 aa16.36■□□□□ 0.21
CDC42BPB-209ENST00000634889 CAPSQ13938 189 aa16.36■□□□□ 0.21
CDC42BPB-209ENST00000634889 KARSQ15046 597 aaKnown RBP16.36■□□□□ 0.21
CDC42BPB-209ENST00000634889 PCBP1Q15365 356 aaKnown RBP eCLIP16.36■□□□□ 0.21
CDC42BPB-209ENST00000634889 FAM102BQ5T8I3 360 aa16.36■□□□□ 0.21
CDC42BPB-209ENST00000634889 IFNLR1Q8IU57 520 aaPredicted RBP16.36■□□□□ 0.21
CDC42BPB-209ENST00000634889 MYOCDQ8IZQ8 938 aa16.36■□□□□ 0.21
CDC42BPB-209ENST00000634889 SYT2Q8N9I0 419 aaPredicted RBP16.36■□□□□ 0.21
CDC42BPB-209ENST00000634889 ASAP3Q8TDY4 903 aa16.36■□□□□ 0.21
CDC42BPB-209ENST00000634889 KIFAP3Q92845 792 aa16.36■□□□□ 0.21
CDC42BPB-209ENST00000634889 TOP1MTQ969P6 601 aa16.36■□□□□ 0.21
CDC42BPB-209ENST00000634889 EPSTI1Q96J88 318 aa16.36■□□□□ 0.21
CDC42BPB-209ENST00000634889 PBX4Q9BYU1 374 aa16.36■□□□□ 0.21
CDC42BPB-209ENST00000634889 C1orf112Q9NSG2 853 aa16.36■□□□□ 0.21
CDC42BPB-209ENST00000634889 RNF216Q9NWF9 866 aaPredicted RBP16.36■□□□□ 0.21
CDC42BPB-209ENST00000634889 MSRAQ9UJ68 235 aa16.36■□□□□ 0.21
CDC42BPB-209ENST00000634889 COL4A6Q14031 1691 aa16.35■□□□□ 0.21
CDC42BPB-209ENST00000634889 DENND3A2RUS2 1198 aa16.35■□□□□ 0.21
CDC42BPB-209ENST00000634889 PLA2G4BP0C869 781 aa16.35■□□□□ 0.21
CDC42BPB-209ENST00000634889 GUCY2CP25092 1073 aa16.35■□□□□ 0.21
CDC42BPB-209ENST00000634889 SLC12A3P55017 1021 aa16.35■□□□□ 0.21
CDC42BPB-209ENST00000634889 PTENP60484 403 aa16.35■□□□□ 0.21
CDC42BPB-209ENST00000634889 KRT85P78386 507 aa16.35■□□□□ 0.21
CDC42BPB-209ENST00000634889 PPP2R5AQ15172 486 aa16.35■□□□□ 0.21
CDC42BPB-209ENST00000634889 SPECC1Q5M775 1068 aa16.35■□□□□ 0.21
CDC42BPB-209ENST00000634889 RINT1Q6NUQ1 792 aa16.35■□□□□ 0.21
CDC42BPB-209ENST00000634889 C1orf186Q6ZWK4 172 aa16.35■□□□□ 0.21
CDC42BPB-209ENST00000634889 USP49Q70CQ1 688 aa16.35■□□□□ 0.21
CDC42BPB-209ENST00000634889 MAEAQ7L5Y9 396 aa16.35■□□□□ 0.21
CDC42BPB-209ENST00000634889 LINC01599Q8WXQ3 324 aa16.35■□□□□ 0.21
CDC42BPB-209ENST00000634889 PLIN2Q99541 437 aa16.35■□□□□ 0.21
CDC42BPB-209ENST00000634889 GPRC5CQ9NQ84 441 aa16.35■□□□□ 0.21
CDC42BPB-209ENST00000634889 CHST12Q9NRB3 414 aa16.35■□□□□ 0.21
CDC42BPB-209ENST00000634889 RGS18Q9NS28 235 aa16.35■□□□□ 0.21
CDC42BPB-209ENST00000634889 STK17AQ9UEE5 414 aa16.35■□□□□ 0.21
CDC42BPB-209ENST00000634889 RBAK-RBAKDNI3L0D1 243 aa16.34■□□□□ 0.21
CDC42BPB-209ENST00000634889 MGEA5O60502 916 aa16.34■□□□□ 0.21
CDC42BPB-209ENST00000634889 ZSCAN20P17040 1043 aaPredicted RBP16.34■□□□□ 0.21
CDC42BPB-209ENST00000634889 NAMPTP43490 491 aa16.34■□□□□ 0.21
CDC42BPB-209ENST00000634889 DSC3Q14574 896 aa16.34■□□□□ 0.21
CDC42BPB-209ENST00000634889 RTN4RL1Q86UN2 441 aaPredicted RBP16.34■□□□□ 0.21
CDC42BPB-209ENST00000634889 RAD54LQ92698 747 aa16.34■□□□□ 0.21
CDC42BPB-209ENST00000634889 TIFAQ96CG3 184 aa16.34■□□□□ 0.21
CDC42BPB-209ENST00000634889 DRC1Q96MC2 740 aa16.34■□□□□ 0.21
CDC42BPB-209ENST00000634889 RAD9AQ99638 391 aa16.34■□□□□ 0.21
CDC42BPB-209ENST00000634889 ADAM2Q99965 735 aa16.34■□□□□ 0.21
CDC42BPB-209ENST00000634889 ZBED2Q9BTP6 218 aa16.34■□□□□ 0.21
CDC42BPB-209ENST00000634889 RUSC1Q9BVN2 902 aa16.34■□□□□ 0.21
CDC42BPB-209ENST00000634889 C17orf75Q9HAS0 396 aa16.34■□□□□ 0.21
CDC42BPB-209ENST00000634889 BLOC1S4Q9NUP1 217 aa16.34■□□□□ 0.21
CDC42BPB-209ENST00000634889 RCOR1Q9UKL0 485 aa16.34■□□□□ 0.21
CDC42BPB-209ENST00000634889 TLL1O43897 1013 aa16.33■□□□□ 0.2
CDC42BPB-209ENST00000634889 CSDE1O75534 798 aaKnown RBP16.33■□□□□ 0.2
CDC42BPB-209ENST00000634889 SSBP05455 408 aaKnown RBP eCLIP16.33■□□□□ 0.2
CDC42BPB-209ENST00000634889 NCLP19338 710 aaKnown RBP16.33■□□□□ 0.2
CDC42BPB-209ENST00000634889 PBX2P40425 430 aa16.33■□□□□ 0.2
CDC42BPB-209ENST00000634889 ME1P48163 572 aa16.33■□□□□ 0.2
CDC42BPB-209ENST00000634889 SARSP49591 514 aaKnown RBP16.33■□□□□ 0.2
CDC42BPB-209ENST00000634889 RABGGTBP53611 331 aa16.33■□□□□ 0.2
CDC42BPB-209ENST00000634889 HTRA4P83105 476 aaPredicted RBP16.33■□□□□ 0.2
CDC42BPB-209ENST00000634889 CDCA2Q69YH5 1023 aaPredicted RBP16.33■□□□□ 0.2
CDC42BPB-209ENST00000634889 CCDC73Q6ZRK6 1079 aa16.33■□□□□ 0.2
CDC42BPB-209ENST00000634889 SLC24A5Q71RS6 500 aa16.33■□□□□ 0.2
CDC42BPB-209ENST00000634889 CATSPER4Q7RTX7 472 aa16.33■□□□□ 0.2
CDC42BPB-209ENST00000634889 NPAS4Q8IUM7 802 aa16.33■□□□□ 0.2
CDC42BPB-209ENST00000634889 LARP4BQ92615 738 aaKnown RBP16.33■□□□□ 0.2
CDC42BPB-209ENST00000634889 IFT74Q96LB3 600 aa16.33■□□□□ 0.2
CDC42BPB-209ENST00000634889 TRAIPQ9BWF2 469 aa16.33■□□□□ 0.2
CDC42BPB-209ENST00000634889 C2orf40Q9H1Z8 148 aa16.33■□□□□ 0.2
CDC42BPB-209ENST00000634889 AGPAT5Q9NUQ2 364 aa16.33■□□□□ 0.2
CDC42BPB-209ENST00000634889 DACT1Q9NYF0 836 aa16.33■□□□□ 0.2
CDC42BPB-209ENST00000634889 INSL6Q9Y581 213 aa16.33■□□□□ 0.2
CDC42BPB-209ENST00000634889 TTC3P53804 2025 aa16.33■□□□□ 0.2
CDC42BPB-209ENST00000634889 LRRIQ4A6NIV6 560 aa16.32■□□□□ 0.2
CDC42BPB-209ENST00000634889 C9IYK1 514 aa16.32■□□□□ 0.2
CDC42BPB-209ENST00000634889 HIP1RO75146 1068 aa16.32■□□□□ 0.2
CDC42BPB-209ENST00000634889 ERLIN2O94905 339 aa16.32■□□□□ 0.2
CDC42BPB-209ENST00000634889 STAG3L1P0CL83 205 aa16.32■□□□□ 0.2
CDC42BPB-209ENST00000634889 FGFR4P22455 802 aa16.32■□□□□ 0.2
CDC42BPB-209ENST00000634889 MBTD1Q05BQ5 628 aa16.32■□□□□ 0.2
CDC42BPB-209ENST00000634889 AXDND1Q5T1B0 1012 aaPredicted RBP16.32■□□□□ 0.2
CDC42BPB-209ENST00000634889 ZNF697Q5TEC3 545 aa16.32■□□□□ 0.2
CDC42BPB-209ENST00000634889 RRAGBQ5VZM2 374 aa16.32■□□□□ 0.2
CDC42BPB-209ENST00000634889 TMCO2Q7Z6W1 182 aaPredicted RBP16.32■□□□□ 0.2
CDC42BPB-209ENST00000634889 ZBTB8OSQ8IWT0 167 aa16.32■□□□□ 0.2
CDC42BPB-209ENST00000634889 CRIPAKQ8N1N5 446 aa16.32■□□□□ 0.2
CDC42BPB-209ENST00000634889 LRRC15Q8TF66 581 aa16.32■□□□□ 0.2
CDC42BPB-209ENST00000634889 SPATA32Q96LK8 384 aa16.32■□□□□ 0.2
CDC42BPB-209ENST00000634889 SCAND2PQ9GZW5 306 aaPredicted RBP16.32■□□□□ 0.2
CDC42BPB-209ENST00000634889 ELAC1Q9H777 363 aaKnown RBP16.32■□□□□ 0.2
CDC42BPB-209ENST00000634889 MINDY3Q9H8M7 445 aa16.32■□□□□ 0.2
CDC42BPB-209ENST00000634889 SLC28A3Q9HAS3 691 aa16.32■□□□□ 0.2
CDC42BPB-209ENST00000634889 KCNG1Q9UIX4 513 aa16.32■□□□□ 0.2
CDC42BPB-209ENST00000634889 ODF2LQ9ULJ1 636 aa16.32■□□□□ 0.2
CDC42BPB-209ENST00000634889 CIZ1Q9ULV3 898 aaPredicted RBP16.32■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms